FFCP PHASE1:Hg19::chr16:89831415..89831435,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2175 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3582 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z6Y4 | |||
|association_with_transcript=11bp_to_ENST00000305699_5end | |||
|cluster_id=chr16:89831415..89831435,- | |||
|description=CAGE_peak_3_at_FANCA_5end | |||
|id=chr16:89831415..89831435,- | |||
|ontology_enrichment_celltype=CL:0002087!1.73e-67!119;CL:0000738!5.78e-65!140;CL:0002031!1.27e-59!124;CL:0000037!1.83e-55!172;CL:0000566!1.83e-55!172;CL:0002032!3.29e-52!165;CL:0000837!3.29e-52!165;CL:0000988!2.46e-50!182;CL:0000766!9.54e-38!76;CL:0002194!2.17e-36!63;CL:0000576!2.17e-36!63;CL:0000040!2.17e-36!63;CL:0000559!2.17e-36!63;CL:0002057!2.23e-35!42;CL:0002009!1.08e-34!65;CL:0000839!1.68e-33!70;CL:0000557!9.27e-33!71;CL:0000860!5.44e-32!45;CL:0000542!6.65e-26!53;CL:0000051!6.65e-26!53;CL:0000838!2.22e-25!52;CL:0000763!3.52e-25!112;CL:0000049!3.52e-25!112;CL:0000945!5.67e-17!24;CL:0000826!5.67e-17!24;CL:0000134!2.20e-12!358;CL:0002320!1.49e-11!365;CL:0000236!1.87e-11!14;CL:0002393!5.10e-11!9;CL:0002397!5.10e-11!9;CL:0000791!1.43e-10!18;CL:0000789!1.43e-10!18;CL:0002420!1.43e-10!18;CL:0002419!1.43e-10!18;CL:0000790!1.43e-10!18;CL:0000219!2.00e-09!390;CL:0000084!2.47e-08!25;CL:0000827!2.47e-08!25;CL:0000625!6.41e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.98e-26;33!CL:0002057;2.98e-26;33!CL:0000236;1.21e-22;13!CL:0000576;8.45e-22;48!CL:0000473;2.80e-19;39!CL:0000234;2.80e-19;39!CL:0000766;7.05e-18;69!CL:0002087;2.09e-15;104!CL:0000945;1.08e-13;24!CL:0000875;3.35e-11;3!CL:0002396;3.35e-11;3!CL:0000763;1.66e-10;100!CL:0000767;5.65e-10;3!CL:0000094;1.25e-09;8!CL:0002393;3.18e-09;6!CL:0002397;3.18e-09;6!CL:0000738;6.10e-09;136!CL:0000542;4.65e-08;53!CL:0000081;6.52e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.30e-43,42;CL:0002057,5.30e-43,42;CL:0000738,6.23e-41,136;CL:0000473,8.43e-40,48;CL:0000234,8.43e-40,48;CL:0002087,6.48e-39,115;CL:0002031,7.25e-37,120;CL:0002032,3.09e-36,161;CL:0000837,3.09e-36,161;CL:0000766,4.68e-35,72;CL:0000037,3.01e-34,168;CL:0000988,6.38e-32,177;CL:0002194,2.07e-30,59;CL:0000576,2.07e-30,59;CL:0000040,2.07e-30,59;CL:0000559,2.07e-30,59;CL:0002009,3.35e-29,61;CL:0000839,1.70e-26,66;CL:0000557,5.30e-26,67;CL:0000763,6.30e-24,108;CL:0000049,6.30e-24,108;CL:0000236,4.49e-21,14;CL:0002393,4.89e-18,9;CL:0002397,4.89e-18,9;CL:0000945,8.70e-14,24;CL:0000826,8.70e-14,24;CL:0000134,9.97e-12,354;CL:0000838,1.75e-11,52;CL:0002320,2.83e-11,361;CL:0000875,3.15e-11,3;CL:0002396,3.15e-11,3;CL:0000542,3.40e-11,53;CL:0000051,3.40e-11,53;CL:0000767,6.23e-10,3;CL:0000219,1.10e-09,386;CL:0000094,1.30e-09,8;CL:0000048,9.39e-08,427;CL:0000034,1.02e-07,441;CL:0000723,1.73e-07,433;CL:0000081,6.67e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.33e-30;42!CL:0000049;4.06e-10;108!CL:0000051;4.65e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.82e-44!102;UBERON:0003061!1.82e-44!102;UBERON:0002193!1.65e-39!112;UBERON:0002371!7.99e-30!80;UBERON:0001474!2.18e-26!86;UBERON:0002405!2.82e-25!115;UBERON:0004765!1.51e-20!101;UBERON:0001434!1.51e-20!101;UBERON:0002384!7.83e-11!375;UBERON:0000178!8.63e-11!15;UBERON:0000179!8.63e-11!15;UBERON:0000463!8.63e-11!15;UBERON:0003081!3.63e-10!216;UBERON:0002204!5.74e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.43e-16;15!UBERON:0000179;1.43e-16;15!UBERON:0000463;1.43e-16;15!UBERON:0002390;1.11e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.60e-36,98;UBERON:0003061,2.60e-36,98;UBERON:0002193,4.36e-32,108;UBERON:0002371,4.86e-24,76;UBERON:0001474,8.81e-22,82;UBERON:0002405,4.99e-20,93;UBERON:0004765,3.07e-19,90;UBERON:0001434,1.23e-16,100;UBERON:0000178,1.47e-16,15;UBERON:0000179,1.47e-16,15;UBERON:0000463,1.47e-16,15;UBERON:0003081,9.59e-14,203;UBERON:0002384,1.17e-10,371;UBERON:0002204,2.23e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.821005894499457,0.708397031823113,2.75354993794233,1.15148819429164,1.54816123316076,0,0,0,0,0.284338464974843,0.880801318004542,0.553995408531877,0.200544447470142,1.95309783644267,0.223915474239924,0.647787332037959,0.77272670290256,1.01778767145695,1.51150377475524,0.485168122375632,0.232429036905685,0.822335776043652,0.309706370895104,0.575384784644301,2.81776777182011,1.18241114944293,4.13694816883942,9.68227025375739,2.70852973188684,0.564727018627814,0.545812300115692,0.449446968890169,2.44867113896722,12.5162320559677,2.55734850319616,0.659702600373432,1.79517291859469,0,0,1.70215567407342,0,0.251248665256743,4.17186334736161,0.217188844705117,1.81619850790011,4.05105399586321,0.316462387440884,4.01385043992689,3.18906449947565,3.56419697364239,2.2465726229299,3.15371474967163,1.12507910687956,3.13514018115373,3.58050018958362,4.74926799788048,5.27988733383968,3.27683166757279,1.77901850772711,1.70692089026603,1.20118796110804,1.72425731986345,2.64417949113945,0.954053754535364,3.41527781465669,1.17447437874188,1.52909291250092,1.32171328579026,0,0.526768169550154,0.196709770113833,0.393010762749165,0.822405995998037,0,0,0,0,0.334231370655521,1.17842362989935,0.443067789167242,0.541607727530031,0.512365278902701,1.04047478047903,0.493313713811028,0.276350017785848,0,0,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0,0.903450714466637,0.383959833463255,1.24930726552346,0.947109008176067,0.821127996921047,1.00803371612366,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.649094787309367,0.696518949197069,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,1.17002132569619,0.445893486866185,0,0,0,0,0,0,0,0.176096868026452,0,0.288239906833923,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,1.79336230389644,1.57624608161542,0.431255149719035,0.256686072559497,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,1.68471475667626,0,0.229723400206959,2.53723804616085,3.0585488285695,2.84823593587081,2.1440859791201,2.05681136543097,3.24236655596359,3.7802200606668,1.58625035258854,0,0,0,0.185803175125719,0,0,0,0,0,0,0,1.40398589056729,0,0,0,0,0.321176150207399,0.80719882876419,0.851692475380653,1.03051603426729,0.614481528616916,0.671028323677248,0.834245708559542,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.861593638227486,0,0,0.179021174675609,0,0.197286811273867,7.18449277040819,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,0,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.961086713109252,0.314408610199332,0.828478110694391,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506827321959218,0,0,0,0.138258436151731,0,0,0,0,0,0,0.39997479170986,0.106691729694141,1.20550485762571,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0,0.460935950223117,0,0.0679697329768317,0,0,0,0,0,0,0,0,0.47775168788705,0.142953088353313,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,0,0,0,0,0.281951753939561,0.837952543656503,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0.740872583160463,0.286888821570705,0,0,0,0,0.0898252021065869,2.34640942403454,0.122241444182866,0,0,0.402547587182052,0.961705476909699 | |||
|short_description=p3@FANCA | |||
}} |
Latest revision as of 12:40, 18 September 2015
Short description: | p3@FANCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FANCA_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000305699_5end |
EntrezGene: | FANCA |
HGNC: | 3582 |
UniProt: | B7Z6Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.60e-36 | 98 |
blood island | 2.60e-36 | 98 |
hemolymphoid system | 4.36e-32 | 108 |
bone marrow | 4.86e-24 | 76 |
bone element | 8.81e-22 | 82 |
immune system | 4.99e-20 | 93 |
skeletal element | 3.07e-19 | 90 |
skeletal system | 1.23e-16 | 100 |
blood | 1.47e-16 | 15 |
haemolymphatic fluid | 1.47e-16 | 15 |
organism substance | 1.47e-16 | 15 |
lateral plate mesoderm | 9.59e-14 | 203 |
connective tissue | 1.17e-10 | 371 |
musculoskeletal system | 2.23e-07 | 167 |