FFCP PHASE1:Hg19::chr17:8054488..8054505,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5187 | |EntrezGene=5187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8845 | |HGNC=8845 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-325bp_to_uc010vuq.1,uc010vus.1_5end | |association_with_transcript=-325bp_to_uc010vuq.1,uc010vus.1_5end | ||
|cluster_id=chr17:8054488..8054505,- | |||
|description=CAGE_peak_5_at_PER1_5end | |description=CAGE_peak_5_at_PER1_5end | ||
|id=chr17:8054488..8054505,- | |id=chr17:8054488..8054505,- | ||
|ontology_enrichment_celltype=CL:0002057!8.41e-15!42;CL:0000860!4.88e-13!45;CL:0000738!7.45e-11!140;CL:0002031!1.49e-09!124;CL:0002087!5.09e-09!119;CL:0000766!1.79e-08!76;CL:0000557!3.28e-08!71;CL:0002009!2.05e-07!65;CL:0000839!3.36e-07!70;CL:0000624!4.15e-07!6 | |ontology_enrichment_celltype=CL:0002057!8.41e-15!42;CL:0000860!4.88e-13!45;CL:0000738!7.45e-11!140;CL:0002031!1.49e-09!124;CL:0002087!5.09e-09!119;CL:0000766!1.79e-08!76;CL:0000557!3.28e-08!71;CL:0002009!2.05e-07!65;CL:0000839!3.36e-07!70;CL:0000624!4.15e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000624;8.20e-13;6!CL:0000860;3.29e-09;33!CL:0002057;3.29e-09;33!CL:0000097;3.54e-09;5!CL:0000791;1.02e-08;18!CL:0000789;1.02e-08;18!CL:0002419;1.02e-08;18!CL:0000623;6.16e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,7.07e-13,6;CL:0000738,5.77e-12,136;CL:0002031,1.52e-11,120;CL:0000766,2.31e-10,72;CL:0002032,2.52e-09,161;CL:0000837,2.52e-09,161;CL:0000097,4.01e-09,5;CL:0002028,4.01e-09,5;CL:0000988,5.76e-09,177;CL:0000791,8.97e-09,18;CL:0000789,8.97e-09,18;CL:0002420,8.97e-09,18;CL:0002419,8.97e-09,18;CL:0000790,8.97e-09,18;CL:0000037,9.93e-09,168;CL:0000860,1.16e-08,42;CL:0002057,1.16e-08,42;CL:0000839,1.53e-08,66;CL:0002087,2.09e-08,115;CL:0000557,2.24e-08,67;CL:0000473,2.35e-07,48;CL:0000234,2.35e-07,48;CL:0000623,7.83e-07,3;CL:0000825,7.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.02e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.72e-11!115;UBERON:0001474!1.55e-09!86;UBERON:0001049!2.93e-09!57;UBERON:0005068!2.93e-09!57;UBERON:0006241!2.93e-09!57;UBERON:0007135!2.93e-09!57;UBERON:0002371!1.69e-08!80;UBERON:0002390!1.91e-08!102;UBERON:0003061!1.91e-08!102;UBERON:0004765!2.57e-08!101;UBERON:0001434!2.57e-08!101;UBERON:0002780!3.81e-08!41;UBERON:0001890!3.81e-08!41;UBERON:0006240!3.81e-08!41;UBERON:0002346!6.59e-08!90;UBERON:0003080!9.12e-08!42;UBERON:0005743!1.00e-07!86;UBERON:0001017!1.97e-07!82;UBERON:0002193!2.51e-07!112;UBERON:0002405!3.22e-07!115;UBERON:0002616!3.64e-07!59;UBERON:0001893!6.04e-07!34;UBERON:0003075!9.11e-07!86;UBERON:0007284!9.11e-07!86;UBERON:0000073!9.72e-07!94;UBERON:0001016!9.72e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;8.26e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.90e-12,82;UBERON:0000007,8.28e-11,2;UBERON:0004765,2.28e-10,90;UBERON:0002371,9.26e-10,76;UBERON:0002390,3.44e-09,98;UBERON:0003061,3.44e-09,98;UBERON:0001434,5.62e-09,100;UBERON:0002405,1.33e-08,93;UBERON:0002193,5.16e-08,108 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0.383829398097213,0.77408061658038,0,0,0,0,0.142169232487422,0.293600439334847,0.553995408531877,0,1.08505435357926,0.223915474239924,0,0,0.290796477559129,0,0.970336244751265,0.929716147622738,0.411167888021826,2.78735733805593,0.575384784644301,0,1.18241114944293,0,0.645484683583826,1.35426486594342,0.188242339542605,0.818718450173537,3.82029923556644,1.53041946185451,0.320929027076094,0.639337125799041,0.329851300186716,0.598390972864896,0.426224750532694,0,0.56738522469114,1.86846674698672,0.502497330513487,1.0429658368404,1.3031330682307,2.42159801053347,0.368277635987565,0.632924774881769,0.211255286311942,0,0,0.22465726229299,0,0.16072558669708,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0.790152254325231,2.360517241366,5.10913991573914,5.96244347098577,0,0.651844533267181,0,0,0,0.883817722424512,0,0.270803863765016,0.128091319725675,0,0,0,0,0.14828656316206,0.267540828089713,0,0,1.53288197440768,0.34362744548263,0.759059076058509,0,0,0,0,0,0,0,0,0.604820229674197,1.33720097891754,2.75166367377318,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31724984865235,3.17063897517315,2.14612136824846,0,0,0,0,0,0,0,0,0,0.07333828582095,0.775630294546667,0,0,0,0,0,0,0,0.714889968290738,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0.394061520403854,1.2937654491571,2.18183161675572,0,2.60279707715243,0,0.335032530668698,0,0,0,1.24324654030811,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0.206768026122887,0.215714200818617,0.853820462427555,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0.183138929636687,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,1.26602474769461,0,0,0,0.19924798825107,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0.482385754501632,0,0.221158519862449,0.295547618953547,3.07139556015562,0,0,0,0.455768223388005,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,1.48260564340311,0,0,2.56124305326573,0,1.1713222286267,0,0,0,0,0,0.30607276163049,0.695052375913368,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0.176512253383001,0.677942222341597,0,0,0.696418755514666,0.195551382734803,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0.313808538937,0,0,0,0.273810757783986,0,0.429765441419957,0.262887354279314,0.279282401272254,0.458320848023367,0,0.399358000997982,0.429226048136571,0,0.604651252380536,0,0,0,0,0,0,0,0,1.0896272488926,0,0,0,0.2249738915515,0.77380195455795,0.546746009922222,0,0.0788057072991982,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.129282956361551,0.39669780522807,0,0,0.213574825135389,0.157204305099666,0,0,0.592834895693833,0,0,0.544017803369474,0.7520696820681,0.919036730290385,0.655745261419609,0,0,0.122026264901963,0.3755727921195,0,0.665574309221114,1.42821726765182,0.276697269872462,0,0.151649117541648,0,0.235265819698172,0,0.144921028610825,0.149254802886874,0.701139929541673,2.21922344601045,1.7046270474758,2.0125432140206,0,0,5.89800602676632,0.466311601748341,0,0.159296767163702,0,0.621051827505038,0.414706207840855,0,0,0.601030435988874,0,0,0.363697318405119,0.322231671127465,0.464033759878494,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.79994958341972,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0.867550349813015,0,0.318004350653419,0,0,2.46873160583479,0,0.706521476061055,0,0.319267718114302,0.41023272848151,0.252071696221718,0.414943514785307,0.322951291263702,0,0,0,0,0,0,0,1.5913297769302,0.300841313397029,0,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| ||
|short_description=p5@PER1 | |short_description=p5@PER1 | ||
}} | }} |
Latest revision as of 13:07, 18 September 2015
Short description: | p5@PER1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PER1_5end |
Coexpression cluster: | NA |
Association with transcript: | -325bp_to_uc010vuq.1, uc010vus.1_5end |
EntrezGene: | PER1 |
HGNC: | 8845 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 7.07e-13 | 6 |
leukocyte | 5.77e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 1.52e-11 | 120 |
myeloid leukocyte | 2.31e-10 | 72 |
hematopoietic oligopotent progenitor cell | 2.52e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-09 | 161 |
mast cell | 4.01e-09 | 5 |
basophil mast progenitor cell | 4.01e-09 | 5 |
hematopoietic cell | 5.76e-09 | 177 |
mature alpha-beta T cell | 8.97e-09 | 18 |
alpha-beta T cell | 8.97e-09 | 18 |
immature T cell | 8.97e-09 | 18 |
mature T cell | 8.97e-09 | 18 |
immature alpha-beta T cell | 8.97e-09 | 18 |
hematopoietic stem cell | 9.93e-09 | 168 |
classical monocyte | 1.16e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.16e-08 | 42 |
myeloid lineage restricted progenitor cell | 1.53e-08 | 66 |
nongranular leukocyte | 2.09e-08 | 115 |
granulocyte monocyte progenitor cell | 2.24e-08 | 67 |
defensive cell | 2.35e-07 | 48 |
phagocyte | 2.35e-07 | 48 |
natural killer cell | 7.83e-07 | 3 |
pro-NK cell | 7.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone element | 9.90e-12 | 82 |
pituitary gland | 8.28e-11 | 2 |
skeletal element | 2.28e-10 | 90 |
bone marrow | 9.26e-10 | 76 |
hematopoietic system | 3.44e-09 | 98 |
blood island | 3.44e-09 | 98 |
skeletal system | 5.62e-09 | 100 |
immune system | 1.33e-08 | 93 |
hemolymphoid system | 5.16e-08 | 108 |