FFCP PHASE1:Hg19::chr1:170632414..170632421,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |||
|TSSclassifier=strong | |||
|UniProt=P54821 | |||
|association_with_transcript=139bp_to_ENST00000367760_5end | |||
|cluster_id=chr1:170632414..170632421,+ | |||
|coexpression_cluster_id=C929 | |||
|description=CAGE_peak_28_at_PRRX1_5end | |||
|id=chr1:170632414..170632421,+ | |||
|ontology_enrichment_celltype=CL:0000057!9.26e-24!75;CL:0000055!1.11e-22!180;CL:0002620!9.60e-11!23;CL:0002334!1.06e-10!12;CL:0002570!5.51e-08!8;CL:0000048!6.10e-08!430;CL:0002556!1.15e-07!6;CL:0000723!1.86e-07!436;CL:0002552!5.19e-07!5;CL:0000034!7.68e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.79e-11;12!CL:0002552;3.39e-10;5!CL:0000062;4.78e-10;9!CL:0000135;2.40e-08;3!CL:0000388;2.40e-08;3!CL:0002580;4.54e-08;3!CL:0000057;1.69e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.55e-15,76;CL:0002334,4.89e-11,12;CL:0002552,2.32e-10,5;CL:0000135,2.04e-08,3;CL:0000388,2.04e-08,3;CL:0002580,2.84e-08,3;CL:0000062,3.99e-08,11;CL:0000375,3.99e-08,11;CL:0000335,3.99e-08,11;CL:0000228,9.79e-07,1;CL:0002372,9.79e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000335;3.10e-08;11!UBERON:0010115;4.29e-07;1!UBERON:0003099;4.29e-07;1!UBERON:0003852;4.29e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;4.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,5.26e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.36e-11!95;UBERON:0002199!5.95e-09!45;UBERON:0002416!5.95e-09!45;UBERON:0000914!4.64e-08!83;UBERON:0002329!4.64e-08!83;UBERON:0003077!4.64e-08!83;UBERON:0003059!4.64e-08!83;UBERON:0007282!4.64e-08!83;UBERON:0009618!4.64e-08!83;UBERON:0007285!4.64e-08!83;UBERON:0002097!9.70e-08!40;UBERON:0001758!1.15e-07!6;UBERON:0003672!1.15e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.40e-08;3!UBERON:0000043;2.40e-08;3!UBERON:0007845;2.40e-08;3!UBERON:0002363;4.29e-07;1!UBERON:0007029;4.29e-07;1!UBERON:0005705;4.29e-07;1!UBERON:0008193;4.29e-07;1!UBERON:0010912;4.29e-07;1!UBERON:0002514;4.29e-07;1!UBERON:0003457;4.29e-07;1!UBERON:0008907;4.29e-07;1!UBERON:0008001;4.29e-07;1!UBERON:0007213;4.29e-07;1!UBERON:0009891;4.29e-07;1!UBERON:0007914;4.29e-07;1!UBERON:0007375;4.29e-07;1!UBERON:0003323;4.29e-07;1!UBERON:0010258;4.29e-07;1!UBERON:0005253;4.29e-07;1!UBERON:0007842;4.29e-07;1!UBERON:0002397;4.29e-07;1!UBERON:0003113;4.29e-07;1!UBERON:0003277;4.29e-07;1!UBERON:0001709;4.29e-07;1!UBERON:0002244;4.29e-07;1!UBERON:0005620;4.29e-07;1!UBERON:0010364;4.29e-07;1!UBERON:0004288;4.29e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.04e-08,3;UBERON:0000043,2.04e-08,3;UBERON:0007845,2.04e-08,3;UBERON:0003102,8.18e-08,99;UBERON:0007029,3.52e-07,1;UBERON:0005705,4.69e-07,1;UBERON:0008193,4.69e-07,1;UBERON:0010912,4.69e-07,1;UBERON:0002514,4.69e-07,1;UBERON:0003457,4.69e-07,1;UBERON:0008907,4.69e-07,1;UBERON:0008001,4.69e-07,1;UBERON:0007213,4.69e-07,1;UBERON:0009891,4.69e-07,1;UBERON:0007914,4.69e-07,1;UBERON:0009292,4.69e-07,1;UBERON:0003099,4.69e-07,1;UBERON:0007375,4.69e-07,1;UBERON:0003323,4.69e-07,1;UBERON:0010258,4.69e-07,1;UBERON:0007842,4.69e-07,1;UBERON:0009494,4.69e-07,1;UBERON:0010042,4.69e-07,1;UBERON:0010045,4.69e-07,1;UBERON:0010259,4.69e-07,1;UBERON:0010359,4.69e-07,1;UBERON:0009526,4.69e-07,1;UBERON:0002397,4.69e-07,1;UBERON:0003113,4.69e-07,1;UBERON:0003277,4.69e-07,1;UBERON:0001709,4.69e-07,1;UBERON:0004066,4.69e-07,1;UBERON:0002244,4.69e-07,1;UBERON:0005620,4.69e-07,1;UBERON:0004362,4.69e-07,1;UBERON:0010364,4.69e-07,1;UBERON:0010046,4.69e-07,1;UBERON:0005868,4.69e-07,1;UBERON:0007238,4.69e-07,1;UBERON:0004288,4.69e-07,1;UBERON:0004068,4.69e-07,1;UBERON:0010334,4.69e-07,1;UBERON:0003852,4.69e-07,1;UBERON:0010253,4.69e-07,1;UBERON:0002363,4.97e-07,1;UBERON:0007645,4.97e-07,1;UBERON:0007647,4.97e-07,1;UBERON:0010115,4.97e-07,1 | |||
|phase1_expression=0.908391896352783,0.856402095563933,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0.251085279189606,0.152826811495903,0.492603536699674,0.236132343941038,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,1.00267582127178,0.724232594804119,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886413581652058,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0.622422070799533,0.269421344139376,0,0,0,0,0.624320153660641,0,0.149448680551801,0.352303495931295,0.971237666208789,0.280901613404497,1.63323337003915,0.491337269247072,0.619954687054593,1.18800285728205,1.7308685049499,0,0,1.17835279767846,0.875829639103749,0.831192346452549,0.438977620880838,0.30648779579902,4.05642759047811,0,0.358779271377724,0.85422955527427,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0.744467425326359,1.18143432568886,1.07180705677318,0,0,1.13152239773168,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,0.535286966391485,0.315404830067869,2.34282829985426,0.300946099727719,2.27407504055985,1.03473071292505,0.664225598535437,0.368738337083406,0.347534457872331,0,0,0,0,0,0,0,0,0.744323423456331,1.38115775959256,1.96462066103151,0.128139149255701,1.53512174720011,0.160853921143607,0,0.462629081407967,1.06537035187876,1.31403449622095,0.519254429183621,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.413509717453592,0.107420244868274,0.145016693914229,0.681813019328807,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0.42793898803392,0.95460974377781,0,0,0,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,2.0851571277401,0,0,0,0,0,0,0,0.693373365065693,0,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,2.034148301238,0,0,0,0,0,0.681552087141687,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,0.934853239388898,0.554805861502613,0.378806010550178,0.754703705257725,0.889811221596536,0.228840068396924,0.151230923763239,0.932623203496683,0.295710299979268,0.63718706865481,1.79921244865442,0.155262956876259,0.414706207840855,0,0,0,0,0.406870733204662,0.181848659202559,0,0.928067519756987,0.796191777397232,0,2.74716564146234,2.35724642136143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,4.23443685579234,0,0.622077260032973,0,0.215649622793364,0.471797825567689,0,0,1.2754495206101,0,0,0.954013051960256,0,0,2.1160556621441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,1.39241355481392,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,1.23109871051734,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0,0,0,0,0.801711364730253,0,0.51215543128185,0,0,0.591660003652827,0.426067023795788,0,0,0,0,0,0,0,0,0.307988420568741,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,1.19929387109915,0,0,0,0,0,0,0,0,0,0,1.48798007266701,2.31087814315709,0,0,0.218531143927391,0,0,0,0,0,0.303114792872958,0.803892390468535,0,0,0.213233981900981,0.476128862927481,0.129177819672012,0,0,0.0636471582781649,0.808468755832877,0.217716747896961,0,0.471464371102113,0.358611026963382,0.665320713092027,0,0,1.9307228228694,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p28@PRRX1 | |||
}} |
Latest revision as of 14:10, 18 September 2015
Short description: | p28@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_PRRX1_5end |
Coexpression cluster: | C929_myxofibrosarcoma_Fibroblast_normal_Olfactory_mesenchymal_dura_Preadipocyte |
Association with transcript: | 139bp_to_ENST00000367760_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.55e-15 | 76 |
preadipocyte | 4.89e-11 | 12 |
fibroblast of gingiva | 2.32e-10 | 5 |
fibrocyte | 2.04e-08 | 3 |
tendon cell | 2.04e-08 | 3 |
preadipocyte of the breast | 2.84e-08 | 3 |
osteoblast | 3.99e-08 | 11 |
osteoprogenitor cell | 3.99e-08 | 11 |
mesenchyme condensation cell | 3.99e-08 | 11 |
multinucleate cell | 9.79e-07 | 1 |
myotube | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 5.26e-07 | 1 |