FFCP PHASE1:Hg19::chr11:60623407..60623412,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11251 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4502 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5Y4 | |||
|association_with_transcript=31bp_to_ENST00000332539,NM_004778,uc001nqc.2_5end | |||
|cluster_id=chr11:60623407..60623412,- | |||
|coexpression_cluster_id=C3168 | |||
|description=CAGE_peak_3_at_PTGDR2_5end | |||
|id=chr11:60623407..60623412,- | |||
|ontology_enrichment_celltype=CL:0000875!3.74e-08!3;CL:0002396!3.74e-08!3;CL:0002564!1.72e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000875;2.25e-26;3!CL:0002396;2.25e-26;3!CL:0002575;3.91e-19;2!CL:0002549;3.44e-18;2!CL:0002564;1.08e-12;3!CL:0000669;4.96e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,1.03e-26,3;CL:0002396,1.03e-26,3;CL:0002575,3.75e-19,2;CL:0002549,4.11e-18,2;CL:0002564,9.95e-13,3;CL:0000669,4.86e-10,4;CL:0002393,2.71e-09,9;CL:0002397,2.71e-09,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002242!1.72e-07!3;UBERON:0003068!1.72e-07!3;UBERON:0002328!1.72e-07!3;UBERON:0004880!1.72e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;3.44e-18;2!UBERON:0005358;3.44e-18;2!UBERON:0001886;3.44e-18;2!UBERON:0004086;3.44e-18;2!UBERON:0005282;3.44e-18;2!UBERON:0005281;3.44e-18;2!UBERON:0011135;2.65e-16;5!UBERON:0002216;2.65e-16;5!UBERON:0011134;2.65e-16;5!UBERON:0002209;2.65e-16;5!UBERON:0002213;2.65e-16;5!UBERON:0007844;2.65e-16;5!UBERON:0011138;2.65e-16;5!UBERON:0001130;2.65e-16;5!UBERON:0001066;2.65e-16;5!UBERON:0001468;2.65e-16;5!UBERON:0002242;1.08e-12;3!UBERON:0004905;2.13e-10;8!UBERON:0000982;2.13e-10;8!UBERON:0004770;2.13e-10;8!UBERON:0005284;8.03e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,4.11e-18,2;UBERON:0005358,4.11e-18,2;UBERON:0001886,4.11e-18,2;UBERON:0004086,4.11e-18,2;UBERON:0005282,4.11e-18,2;UBERON:0005281,4.11e-18,2;UBERON:0011135,3.03e-16,5;UBERON:0002216,3.03e-16,5;UBERON:0011134,3.03e-16,5;UBERON:0002209,3.03e-16,5;UBERON:0002213,3.03e-16,5;UBERON:0005856,3.03e-16,5;UBERON:0005866,3.03e-16,5;UBERON:0005863,3.03e-16,5;UBERON:0007844,3.03e-16,5;UBERON:0011138,3.03e-16,5;UBERON:0001130,3.03e-16,5;UBERON:0001066,3.03e-16,5;UBERON:0001468,3.03e-16,5;UBERON:0002242,9.95e-13,3;UBERON:0003068,9.95e-13,3;UBERON:0002328,9.95e-13,3;UBERON:0004880,9.95e-13,3;UBERON:0004905,2.31e-10,8;UBERON:0000982,2.31e-10,8;UBERON:0004770,2.31e-10,8;UBERON:0005284,8.61e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.11389717664042,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0,0,0,0,1.99508920618874,1.9891667719909,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,0,0,0,0,0,0,0,0,7.68732152507698,0,0.221533894583621,0,1.79327847615945,2.9913649938772,1.80881695064044,1.10540007114339,0.289803085735052,0,0,0,0.339928028092699,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36221684880438,1.15235184896,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,1.03664057770386,0.144119953416961,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,1.50051156317903,2.17012018959788,0,0,0,0,0,0,0,0,0,0.0868836144680828,6.85304051119592,3.77457766191941,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0.42793898803392,0,0,0.719489830333259,0.823611089208164,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,1.52927441428475,0,1.19115887728894,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0.540911356951966,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.31396051279005,0.664846727600626,0,0.392125068635479,0.167821586975843,0,0.317873157960757,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775066918032073,0.372448285775147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p3@PTGDR2 | |||
}} |
Latest revision as of 14:11, 18 September 2015
Short description: | p3@PTGDR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTGDR2_5end |
Coexpression cluster: | C3168_CD4_Pericytes_Neutrophils_Nucleus_Whole_CD14CD16_Fibroblast |
Association with transcript: | 31bp_to_ENST00000332539, NM_004778, uc001nqc.2_5end |
EntrezGene: | PTGDR2 |
HGNC: | 4502 |
UniProt: | Q9Y5Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 1.03e-26 | 3 |
CD14-low, CD16-positive monocyte | 1.03e-26 | 3 |
central nervous system pericyte | 3.75e-19 | 2 |
fibroblast of choroid plexus | 4.11e-18 | 2 |
nucleus pulposus cell of intervertebral disc | 9.95e-13 | 3 |
pericyte cell | 4.86e-10 | 4 |
intermediate monocyte | 2.71e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.71e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 4.11e-18 | 2 |
ventricle of nervous system | 4.11e-18 | 2 |
choroid plexus | 4.11e-18 | 2 |
brain ventricle | 4.11e-18 | 2 |
ventricular system of brain | 4.11e-18 | 2 |
ventricular system of central nervous system | 4.11e-18 | 2 |
intervertebral cartilage | 3.03e-16 | 5 |
symphysis | 3.03e-16 | 5 |
nonsynovial joint | 3.03e-16 | 5 |
fibrous joint | 3.03e-16 | 5 |
cartilaginous joint | 3.03e-16 | 5 |
developing mesenchymal condensation | 3.03e-16 | 5 |
pre-cartilage condensation | 3.03e-16 | 5 |
cartilaginous condensation | 3.03e-16 | 5 |
cartilage element | 3.03e-16 | 5 |
post-cranial axial skeletal system | 3.03e-16 | 5 |
vertebral column | 3.03e-16 | 5 |
intervertebral disk | 3.03e-16 | 5 |
intervertebral joint | 3.03e-16 | 5 |
nucleus pulposus | 9.95e-13 | 3 |
axial mesoderm | 9.95e-13 | 3 |
notochord | 9.95e-13 | 3 |
chordamesoderm | 9.95e-13 | 3 |
articulation | 2.31e-10 | 8 |
skeletal joint | 2.31e-10 | 8 |
articular system | 2.31e-10 | 8 |
brain vasculature | 8.61e-08 | 5 |