FFCP PHASE1:Hg19::chr17:8213567..8213579,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:8213567..8213579,+
|short_description=p3@ARHGEF15
|description=CAGE_peak_3_at_ARHGEF15_5end
|association_with_transcript=8bp_to_ENST00000361926_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22899 | |EntrezGene=22899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15590 | |HGNC=15590 | ||
|TSSclassifier=strong | |||
|UniProt=O94989 | |UniProt=O94989 | ||
|association_with_transcript=8bp_to_ENST00000361926_5end | |||
|cluster_id=chr17:8213567..8213579,+ | |||
|coexpression_cluster_id=C2447 | |||
|description=CAGE_peak_3_at_ARHGEF15_5end | |||
|id=chr17:8213567..8213579,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.27e-31!35;CL:0002139!1.58e-31!24;CL:0000071!1.34e-24!18;CL:0002546!1.34e-24!18;CL:0002078!2.58e-24!44;CL:0000213!2.69e-16!57;CL:0000215!2.69e-16!57;CL:1000413!2.32e-13!9;CL:0002543!1.05e-09!6;CL:0002544!1.83e-09!6;CL:0005020!1.80e-08!6;CL:0002138!1.80e-08!6;CL:0005022!1.80e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.13e-41;24!CL:0000115;4.81e-39;36!CL:0000071;6.32e-37;18!CL:1000413;1.32e-21;9!CL:0002078;7.52e-21;45!CL:0002543;2.33e-15;6!CL:0000213;2.47e-15;58!CL:0000215;2.47e-15;58!CL:0002544;6.55e-15;6!CL:0002618;6.27e-09;3!CL:0002188;2.22e-08;5!CL:0002138;6.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.55e-44,36;CL:0002139,1.61e-41,24;CL:0000071,5.14e-37,18;CL:0002546,5.14e-37,18;CL:0002078,8.89e-34,45;CL:0000213,2.27e-24,58;CL:0000215,2.27e-24,58;CL:1000413,1.14e-21,9;CL:0002543,1.95e-15,6;CL:0002544,5.06e-15,6;CL:0002618,6.46e-09,3;CL:0002188,2.14e-08,5;CL:0000222,7.60e-08,121;CL:0000076,2.83e-07,63;CL:0005020,6.36e-07,6;CL:0002138,6.36e-07,6;CL:0005022,6.36e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;6.32e-37;18!UBERON:0004872;2.16e-11;7!CL:0005022;6.80e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.68e-61!115;UBERON:0001986!1.34e-24!18;UBERON:0004638!1.34e-24!18;UBERON:0004852!1.34e-24!18;UBERON:0004111!1.71e-24!241;UBERON:0000477!1.15e-23!286;UBERON:0000025!1.33e-21!194;UBERON:0000487!6.22e-19!22;UBERON:0006914!1.83e-17!25;UBERON:0001049!4.84e-17!57;UBERON:0005068!4.84e-17!57;UBERON:0006241!4.84e-17!57;UBERON:0007135!4.84e-17!57;UBERON:0003915!2.32e-13!9;UBERON:0004700!2.32e-13!9;UBERON:0001917!2.32e-13!9;UBERON:0003075!2.46e-13!86;UBERON:0007284!2.46e-13!86;UBERON:0000055!3.81e-13!69;UBERON:0000483!3.88e-13!309;UBERON:0002616!5.38e-13!59;UBERON:0000119!8.99e-13!312;UBERON:0002346!3.12e-12!90;UBERON:0003080!1.30e-11!42;UBERON:0000955!3.28e-11!69;UBERON:0006238!3.28e-11!69;UBERON:0001017!4.90e-11!82;UBERON:0002049!5.96e-11!79;UBERON:0007798!5.96e-11!79;UBERON:0005743!6.45e-11!86;UBERON:0002780!1.06e-10!41;UBERON:0001890!1.06e-10!41;UBERON:0006240!1.06e-10!41;UBERON:0000467!2.28e-10!625;UBERON:0004872!2.34e-10!84;UBERON:0000480!2.73e-10!626;UBERON:0000468!2.93e-10!659;UBERON:0001981!7.84e-10!60;UBERON:0007500!7.84e-10!60;UBERON:0004537!7.84e-10!60;UBERON:0006965!7.84e-10!60;UBERON:0001009!1.12e-09!113;UBERON:0000073!1.13e-09!94;UBERON:0001016!1.13e-09!94;UBERON:0002020!1.55e-09!34;UBERON:0003528!1.55e-09!34;UBERON:0001893!1.58e-09!34;UBERON:0002791!5.42e-09!33;UBERON:0002619!1.18e-08!22;UBERON:0003914!1.38e-08!118;UBERON:0002298!2.00e-08!8;UBERON:0001950!2.05e-08!20;UBERON:0001869!2.50e-08!32;UBERON:0001638!4.07e-08!9;UBERON:0003920!4.07e-08!9;UBERON:0004582!4.07e-08!9;UBERON:0004535!4.75e-08!110;UBERON:0002465!9.73e-08!10;UBERON:0003056!1.94e-07!61;UBERON:0000956!3.23e-07!25;UBERON:0000203!3.23e-07!25;UBERON:0000153!5.39e-07!129;UBERON:0007811!5.39e-07!129;UBERON:0003103!5.62e-07!69;UBERON:0003076!7.04e-07!15;UBERON:0003057!7.04e-07!15;UBERON:0000922!8.45e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.32e-37;18!UBERON:0001986;6.32e-37;18!UBERON:0004852;6.32e-37;18!UBERON:0000487;2.72e-29;22!UBERON:0006914;3.54e-25;25!UBERON:0003915;1.32e-21;9!UBERON:0004700;1.32e-21;9!UBERON:0001917;1.32e-21;9!UBERON:0000490;1.51e-16;33!UBERON:0001638;2.49e-13;9!UBERON:0003920;2.49e-13;9!UBERON:0004582;2.49e-13;9!UBERON:0000055;3.62e-10;65!UBERON:0003978;8.29e-09;3!UBERON:0000946;8.29e-09;3!UBERON:0007500;1.06e-08;56!UBERON:0001981;1.06e-08;56!UBERON:0004537;1.06e-08;56!UBERON:0004151;7.05e-08;3!UBERON:0001009;1.77e-07;112!UBERON:0003914;9.85e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.14e-37,18;UBERON:0001986,5.14e-37,18;UBERON:0004852,5.14e-37,18;UBERON:0000487,2.30e-29,22;UBERON:0006914,3.06e-25,25;UBERON:0003915,1.14e-21,9;UBERON:0004700,1.14e-21,9;UBERON:0001917,1.14e-21,9;UBERON:0000055,2.23e-21,68;UBERON:0007023,2.53e-21,114;UBERON:0004872,1.62e-18,83;UBERON:0007500,4.01e-18,59;UBERON:0001981,4.01e-18,59;UBERON:0004537,4.01e-18,59;UBERON:0006965,4.01e-18,59;UBERON:0002049,1.35e-17,78;UBERON:0007798,1.35e-17,78;UBERON:0001009,2.74e-16,112;UBERON:0003914,6.72e-14,117;UBERON:0004535,1.98e-13,109;UBERON:0001638,2.37e-13,9;UBERON:0003920,2.37e-13,9;UBERON:0004582,2.37e-13,9;UBERON:0004111,6.27e-12,240;UBERON:0003103,7.68e-10,68;UBERON:0003978,8.76e-09,3;UBERON:0009751,8.76e-09,3;UBERON:0000946,8.76e-09,3;UBERON:0002523,8.76e-09,3;UBERON:0005983,8.76e-09,3;UBERON:0002165,8.76e-09,3;UBERON:0002062,8.76e-09,3;UBERON:0007280,8.76e-09,3;UBERON:0000025,9.61e-09,192;UBERON:0004151,9.06e-08,3 | |||
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| ||
|short_description=p3@ARHGEF15 | |||
}} | }} |
Latest revision as of 15:23, 18 September 2015
Short description: | p3@ARHGEF15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGEF15_5end |
Coexpression cluster: | C2447_Renal_lung_Endothelial_adipose_heart_Hepatic_mature |
Association with transcript: | 8bp_to_ENST00000361926_5end |
EntrezGene: | ARHGEF15 |
HGNC: | 15590 |
UniProt: | O94989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.55e-44 | 36 |
endothelial cell of vascular tree | 1.61e-41 | 24 |
blood vessel endothelial cell | 5.14e-37 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.14e-37 | 18 |
meso-epithelial cell | 8.89e-34 | 45 |
lining cell | 2.27e-24 | 58 |
barrier cell | 2.27e-24 | 58 |
endothelial cell of artery | 1.14e-21 | 9 |
vein endothelial cell | 1.95e-15 | 6 |
aortic endothelial cell | 5.06e-15 | 6 |
endothelial cell of umbilical vein | 6.46e-09 | 3 |
glomerular endothelial cell | 2.14e-08 | 5 |
mesodermal cell | 7.60e-08 | 121 |
squamous epithelial cell | 2.83e-07 | 63 |
lymphangioblast | 6.36e-07 | 6 |
endothelial cell of lymphatic vessel | 6.36e-07 | 6 |
vascular lymphangioblast | 6.36e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.14e-37 | 18 |
endothelium | 5.14e-37 | 18 |
cardiovascular system endothelium | 5.14e-37 | 18 |
simple squamous epithelium | 2.30e-29 | 22 |
squamous epithelium | 3.06e-25 | 25 |
endothelial tube | 1.14e-21 | 9 |
arterial system endothelium | 1.14e-21 | 9 |
endothelium of artery | 1.14e-21 | 9 |
vessel | 2.23e-21 | 68 |
adult organism | 2.53e-21 | 114 |
splanchnic layer of lateral plate mesoderm | 1.62e-18 | 83 |
epithelial tube open at both ends | 4.01e-18 | 59 |
blood vessel | 4.01e-18 | 59 |
blood vasculature | 4.01e-18 | 59 |
vascular cord | 4.01e-18 | 59 |
vasculature | 1.35e-17 | 78 |
vascular system | 1.35e-17 | 78 |
circulatory system | 2.74e-16 | 112 |
epithelial tube | 6.72e-14 | 117 |
cardiovascular system | 1.98e-13 | 109 |
vein | 2.37e-13 | 9 |
venous blood vessel | 2.37e-13 | 9 |
venous system | 2.37e-13 | 9 |
anatomical conduit | 6.27e-12 | 240 |
compound organ | 7.68e-10 | 68 |
valve | 8.76e-09 | 3 |
cardiac mesenchyme | 8.76e-09 | 3 |
cardial valve | 8.76e-09 | 3 |
tunica intima | 8.76e-09 | 3 |
heart layer | 8.76e-09 | 3 |
endocardium | 8.76e-09 | 3 |
endocardial cushion | 8.76e-09 | 3 |
presumptive endocardium | 8.76e-09 | 3 |
tube | 9.61e-09 | 192 |
cardiac chamber | 9.06e-08 | 3 |