FFCP PHASE1:Hg19::chr2:85922503..85922515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10578 | |EntrezGene=10578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4414 | |HGNC=4414 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=243bp_to_ENST00000531685_5end | |association_with_transcript=243bp_to_ENST00000531685_5end | ||
|cluster_id=chr2:85922503..85922515,+ | |||
|coexpression_cluster_id=C8 | |coexpression_cluster_id=C8 | ||
|description=CAGE_peak_6_at_GNLY_5end | |description=CAGE_peak_6_at_GNLY_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000791!6.68e-23!18;CL:0000789!6.68e-23!18;CL:0002420!6.68e-23!18;CL:0002419!6.68e-23!18;CL:0000790!6.68e-23!18;CL:0000625!2.87e-21!11;CL:0000084!6.64e-19!25;CL:0000827!6.64e-19!25;CL:0000738!4.42e-16!140;CL:0002087!2.62e-14!119;CL:0000838!9.30e-13!52;CL:0000623!9.86e-13!3;CL:0000825!9.86e-13!3;CL:0000542!1.89e-12!53;CL:0000051!1.89e-12!53;CL:0000842!3.96e-12!3;CL:0000767!6.63e-12!3;CL:0000037!9.60e-12!172;CL:0000566!9.60e-12!172;CL:0000988!1.04e-10!182;CL:0002031!7.05e-10!124;CL:0002032!1.93e-09!165;CL:0000837!1.93e-09!165;CL:0000224!3.39e-09!4 | |ontology_enrichment_celltype=CL:0000791!6.68e-23!18;CL:0000789!6.68e-23!18;CL:0002420!6.68e-23!18;CL:0002419!6.68e-23!18;CL:0000790!6.68e-23!18;CL:0000625!2.87e-21!11;CL:0000084!6.64e-19!25;CL:0000827!6.64e-19!25;CL:0000738!4.42e-16!140;CL:0002087!2.62e-14!119;CL:0000838!9.30e-13!52;CL:0000623!9.86e-13!3;CL:0000825!9.86e-13!3;CL:0000542!1.89e-12!53;CL:0000051!1.89e-12!53;CL:0000842!3.96e-12!3;CL:0000767!6.63e-12!3;CL:0000037!9.60e-12!172;CL:0000566!9.60e-12!172;CL:0000988!1.04e-10!182;CL:0002031!7.05e-10!124;CL:0002032!1.93e-09!165;CL:0000837!1.93e-09!165;CL:0000224!3.39e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.98e-59;11!CL:0000791;6.11e-36;18!CL:0000789;6.11e-36;18!CL:0002419;6.11e-36;18!CL:0000623;3.88e-33;3!CL:0000084;1.16e-25;25!CL:0000226;5.29e-15;3!CL:0000842;5.29e-15;3!CL:0000542;1.23e-10;53!CL:0002087;5.51e-09;104!CL:0002393;7.58e-08;6!CL:0002397;7.58e-08;6 | |ontology_enrichment_celltype_v019=CL:0000625;2.98e-59;11!CL:0000791;6.11e-36;18!CL:0000789;6.11e-36;18!CL:0002419;6.11e-36;18!CL:0000623;3.88e-33;3!CL:0000084;1.16e-25;25!CL:0000226;5.29e-15;3!CL:0000842;5.29e-15;3!CL:0000542;1.23e-10;53!CL:0002087;5.51e-09;104!CL:0002393;7.58e-08;6!CL:0002397;7.58e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.88e-59,11;CL:0000791,5.99e-36,18;CL:0000789,5.99e-36,18;CL:0002420,5.99e-36,18;CL:0002419,5.99e-36,18;CL:0000790,5.99e-36,18;CL:0000623,4.33e-33,3;CL:0000825,4.33e-33,3;CL:0000084,1.14e-25,25;CL:0000827,1.14e-25,25;CL:0000838,7.31e-23,52;CL:0000542,2.11e-22,53;CL:0000051,2.11e-22,53;CL:0002087,3.77e-18,115;CL:0000738,2.55e-17,136;CL:0000226,7.53e-15,3;CL:0000842,7.53e-15,3;CL:0000037,1.33e-13,168;CL:0000988,8.49e-13,177;CL:0002031,9.77e-13,120;CL:0002032,1.25e-10,161;CL:0000837,1.25e-10,161 | |||
|ontology_enrichment_development_v019=CL:0000790;6.11e-36;18!CL:0000051;1.23e-10;53 | |ontology_enrichment_development_v019=CL:0000790;6.11e-36;18!CL:0000051;1.23e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.59e-19!15;UBERON:0000179!7.59e-19!15;UBERON:0000463!7.59e-19!15;UBERON:0002390!4.39e-08!102;UBERON:0003061!4.39e-08!102;UBERON:0002193!5.37e-07!112 | |ontology_enrichment_uberon=UBERON:0000178!7.59e-19!15;UBERON:0000179!7.59e-19!15;UBERON:0000463!7.59e-19!15;UBERON:0002390!4.39e-08!102;UBERON:0003061!4.39e-08!102;UBERON:0002193!5.37e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.55e-17;15!UBERON:0000179;1.55e-17;15!UBERON:0000463;1.55e-17;15!UBERON:0002390;7.44e-08;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.55e-17;15!UBERON:0000179;1.55e-17;15!UBERON:0000463;1.55e-17;15!UBERON:0002390;7.44e-08;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.98e-17,15;UBERON:0000179,1.98e-17,15;UBERON:0000463,1.98e-17,15 | |||
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| ||
|short_description=p6@GNLY | |short_description=p6@GNLY | ||
}} | }} |
Latest revision as of 17:52, 18 September 2015
Short description: | p6@GNLY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GNLY_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 243bp_to_ENST00000531685_5end |
EntrezGene: | GNLY |
HGNC: | 4414 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.88e-59 | 11 |
mature alpha-beta T cell | 5.99e-36 | 18 |
alpha-beta T cell | 5.99e-36 | 18 |
immature T cell | 5.99e-36 | 18 |
mature T cell | 5.99e-36 | 18 |
immature alpha-beta T cell | 5.99e-36 | 18 |
natural killer cell | 4.33e-33 | 3 |
pro-NK cell | 4.33e-33 | 3 |
T cell | 1.14e-25 | 25 |
pro-T cell | 1.14e-25 | 25 |
lymphoid lineage restricted progenitor cell | 7.31e-23 | 52 |
lymphocyte | 2.11e-22 | 53 |
common lymphoid progenitor | 2.11e-22 | 53 |
nongranular leukocyte | 3.77e-18 | 115 |
leukocyte | 2.55e-17 | 136 |
single nucleate cell | 7.53e-15 | 3 |
mononuclear cell | 7.53e-15 | 3 |
hematopoietic stem cell | 1.33e-13 | 168 |
hematopoietic cell | 8.49e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 9.77e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.25e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.25e-10 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.98e-17 | 15 |
haemolymphatic fluid | 1.98e-17 | 15 |
organism substance | 1.98e-17 | 15 |