FFCP PHASE1:Hg19::chr6:41021027..41021038,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10930 | |EntrezGene=10930 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=605 | |HGNC=605 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y235 | |UniProt=Q9Y235 | ||
|association_with_transcript=-4bp_to_ENST00000244669_5end | |association_with_transcript=-4bp_to_ENST00000244669_5end | ||
|cluster_id=chr6:41021027..41021038,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_APOBEC2_5end | |description=CAGE_peak_3_at_APOBEC2_5end | ||
|id=chr6:41021027..41021038,+ | |id=chr6:41021027..41021038,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.26e-08!9 | |ontology_enrichment_celltype=CL:0000188!1.26e-08!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.04e-09;1!UBERON:0010227;3.18e-09;1!UBERON:0004140;3.18e-09;1!UBERON:0004874;3.72e-09;1!UBERON:0000358;7.27e-09;1!UBERON:0005062;1.35e-08;4!UBERON:0007284;1.35e-08;4!UBERON:0006603;1.62e-07;65 | |||
|ontology_enrichment_disease=DOID:114!3.80e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.22e-16;2!DOID:178;5.53e-09;1!DOID:326;5.53e-09;1!DOID:3978;5.53e-09;1!DOID:3394;5.53e-09;1!DOID:5844;5.53e-09;1!DOID:1287;9.02e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.27e-16,2;DOID:178,5.75e-09,1;DOID:326,5.75e-09,1;DOID:3978,5.75e-09,1;DOID:3394,5.75e-09,1;DOID:5844,5.75e-09,1;DOID:1287,9.20e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.60e-19!115;UBERON:0004151!3.21e-11!3;UBERON:0003978!5.87e-11!3;UBERON:0009751!5.87e-11!3;UBERON:0000946!5.87e-11!3;UBERON:0002523!5.87e-11!3;UBERON:0005983!5.87e-11!3;UBERON:0002165!5.87e-11!3;UBERON:0002062!5.87e-11!3;UBERON:0007280!5.87e-11!3;UBERON:0007100!6.48e-09!27;UBERON:0001630!2.42e-08!2;UBERON:0005090!2.42e-08!2;UBERON:0001042!2.83e-08!10;UBERON:0009145!2.83e-08!10;UBERON:0000341!4.83e-08!2;UBERON:0002081!7.02e-08!2;UBERON:0002133!9.19e-08!2;UBERON:0006562!1.74e-07!11;UBERON:0001905!1.84e-07!2;UBERON:0002757!1.84e-07!2;UBERON:0010134!1.84e-07!2;UBERON:0002784!1.84e-07!2;UBERON:0005408!1.84e-07!2;UBERON:0001899!1.84e-07!2;UBERON:0008814!2.01e-07!15;UBERON:0003127!2.16e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!1.60e-19!115;UBERON:0004151!3.21e-11!3;UBERON:0003978!5.87e-11!3;UBERON:0009751!5.87e-11!3;UBERON:0000946!5.87e-11!3;UBERON:0002523!5.87e-11!3;UBERON:0005983!5.87e-11!3;UBERON:0002165!5.87e-11!3;UBERON:0002062!5.87e-11!3;UBERON:0007280!5.87e-11!3;UBERON:0007100!6.48e-09!27;UBERON:0001630!2.42e-08!2;UBERON:0005090!2.42e-08!2;UBERON:0001042!2.83e-08!10;UBERON:0009145!2.83e-08!10;UBERON:0000341!4.83e-08!2;UBERON:0002081!7.02e-08!2;UBERON:0002133!9.19e-08!2;UBERON:0006562!1.74e-07!11;UBERON:0001905!1.84e-07!2;UBERON:0002757!1.84e-07!2;UBERON:0010134!1.84e-07!2;UBERON:0002784!1.84e-07!2;UBERON:0005408!1.84e-07!2;UBERON:0001899!1.84e-07!2;UBERON:0008814!2.01e-07!15;UBERON:0003127!2.16e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.22e-19;25!UBERON:0005090;4.53e-17;2!UBERON:0001630;4.53e-17;2!UBERON:0000341;2.28e-16;2!UBERON:0001134;2.45e-12;16!UBERON:0002036;2.45e-12;16!UBERON:0004151;1.38e-11;3!UBERON:0001723;1.70e-11;3!UBERON:0001033;1.70e-11;3!UBERON:0003978;3.60e-11;3!UBERON:0000946;3.60e-11;3!UBERON:0001389;1.60e-09;1!UBERON:0000026;1.60e-09;1!UBERON:0008784;1.60e-09;1!UBERON:0006058;1.60e-09;1!UBERON:0003663;1.60e-09;1!UBERON:0004256;1.60e-09;1!UBERON:0004708;1.60e-09;1!UBERON:0002101;1.60e-09;1!UBERON:0004709;1.60e-09;1!UBERON:0002529;1.60e-09;1!UBERON:0010538;1.60e-09;1!UBERON:0003661;1.60e-09;1!UBERON:0010890;1.60e-09;1!UBERON:0002471;1.60e-09;1!UBERON:0001383;1.60e-09;1!UBERON:0010758;1.60e-09;1!UBERON:0010707;1.60e-09;1!UBERON:0000978;1.60e-09;1!UBERON:0002103;1.60e-09;1!UBERON:0001665;1.60e-09;1!UBERON:0003823;1.60e-09;1!UBERON:0000154;1.60e-09;1!UBERON:0010709;1.60e-09;1!UBERON:0002084;2.04e-09;1!UBERON:0002082;2.04e-09;1!UBERON:0002426;2.82e-09;1!UBERON:0003831;2.82e-09;1!UBERON:0003898;2.82e-09;1!UBERON:0004830;2.82e-09;1!UBERON:0003830;2.82e-09;1!UBERON:0005175;2.82e-09;1!UBERON:0001774;2.82e-09;1!UBERON:0001103;2.82e-09;1!UBERON:0002079;3.18e-09;1!UBERON:0000989;3.72e-09;1!UBERON:0008811;3.72e-09;1!UBERON:0002146;4.54e-09;1!UBERON:0005623;4.54e-09;1!UBERON:0002135;6.22e-09;1!UBERON:0007029;6.72e-09;1!UBERON:0001301;9.53e-09;1!UBERON:0000948;9.97e-09;22!UBERON:0000922;7.68e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.90e-17,27;UBERON:0005090,4.54e-17,2;UBERON:0001630,4.54e-17,2;UBERON:0000341,2.19e-16,2;UBERON:0003103,2.74e-14,68;UBERON:0004151,1.41e-11,3;UBERON:0001723,1.74e-11,3;UBERON:0001033,1.74e-11,3;UBERON:0010056,1.74e-11,3;UBERON:0003978,3.60e-11,3;UBERON:0009751,3.60e-11,3;UBERON:0000946,3.60e-11,3;UBERON:0002523,3.60e-11,3;UBERON:0005983,3.60e-11,3;UBERON:0002165,3.60e-11,3;UBERON:0002062,3.60e-11,3;UBERON:0007280,3.60e-11,3;UBERON:0007023,8.74e-11,114;UBERON:0005418,1.60e-09,1;UBERON:0001389,1.60e-09,1;UBERON:0000026,1.60e-09,1;UBERON:0008784,1.60e-09,1;UBERON:0006058,1.60e-09,1;UBERON:0003663,1.60e-09,1;UBERON:0004256,1.60e-09,1;UBERON:0004708,1.60e-09,1;UBERON:0002101,1.60e-09,1;UBERON:0004709,1.60e-09,1;UBERON:0002529,1.60e-09,1;UBERON:0010538,1.60e-09,1;UBERON:0003661,1.60e-09,1;UBERON:0010890,1.60e-09,1;UBERON:0002471,1.60e-09,1;UBERON:0001383,1.60e-09,1;UBERON:0004357,1.60e-09,1;UBERON:0004347,1.60e-09,1;UBERON:0005420,1.60e-09,1;UBERON:0005732,1.60e-09,1;UBERON:0010758,1.60e-09,1;UBERON:0010707,1.60e-09,1;UBERON:0000978,1.60e-09,1;UBERON:0002103,1.60e-09,1;UBERON:0001665,1.60e-09,1;UBERON:0003823,1.60e-09,1;UBERON:0000154,1.60e-09,1;UBERON:0010709,1.60e-09,1;UBERON:0005733,1.60e-09,1;UBERON:0005730,1.60e-09,1;UBERON:0002084,2.04e-09,1;UBERON:0002082,2.04e-09,1;UBERON:0010226,2.04e-09,1;UBERON:0002426,2.82e-09,1;UBERON:0003831,2.82e-09,1;UBERON:0003898,2.82e-09,1;UBERON:0004830,2.82e-09,1;UBERON:0003830,2.82e-09,1;UBERON:0005175,2.82e-09,1;UBERON:0001774,2.82e-09,1;UBERON:0001103,2.82e-09,1;UBERON:0010084,2.82e-09,1;UBERON:0002079,3.31e-09,1;UBERON:0000989,3.58e-09,1;UBERON:0008811,3.58e-09,1;UBERON:0006258,3.58e-09,1;UBERON:0005876,3.58e-09,1;UBERON:0004874,3.58e-09,1;UBERON:0002146,4.54e-09,1;UBERON:0005623,4.54e-09,1;UBERON:0002135,6.22e-09,1;UBERON:0007029,6.72e-09,1;UBERON:0001301,8.49e-09,1;UBERON:0000948,5.54e-08,24;UBERON:0005498,5.54e-08,24;UBERON:0004140,5.54e-08,24;UBERON:0009881,5.54e-08,24;UBERON:0004141,5.54e-08,24;UBERON:0003084,5.54e-08,24;UBERON:0007005,5.54e-08,24;UBERON:0004139,5.54e-08,24;UBERON:0004291,5.54e-08,24 | |||
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|short_description=p3@APOBEC2 | |short_description=p3@APOBEC2 | ||
}} | }} |
Latest revision as of 17:58, 18 September 2015
Short description: | p3@APOBEC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_APOBEC2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -4bp_to_ENST00000244669_5end |
EntrezGene: | APOBEC2 |
HGNC: | 605 |
UniProt: | Q9Y235 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.27e-16 | 2 |
vascular disease | 5.75e-09 | 1 |
ischemia | 5.75e-09 | 1 |
extrinsic cardiomyopathy | 5.75e-09 | 1 |
myocardial ischemia | 5.75e-09 | 1 |
myocardial infarction | 5.75e-09 | 1 |
cardiovascular system disease | 9.20e-09 | 4 |