FFCP PHASE1:Hg19::chr1:62417757..62417760,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10207 | |EntrezGene=10207 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28881 | |HGNC=28881 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-165bp_to_uc009wag.2,uc010oot.1_5end | |association_with_transcript=-165bp_to_uc009wag.2,uc010oot.1_5end | ||
|cluster_id=chr1:62417757..62417760,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_18_at_INADL_5end | |description=CAGE_peak_18_at_INADL_5end | ||
|id=chr1:62417757..62417760,+ | |id=chr1:62417757..62417760,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | |||
|ontology_enrichment_disease=DOID:178!9.99e-16!1;DOID:326!9.99e-16!1;DOID:3978!9.99e-16!1;DOID:3394!9.99e-16!1;DOID:5844!9.99e-16!1;DOID:114!1.61e-08!2 | |ontology_enrichment_disease=DOID:178!9.99e-16!1;DOID:326!9.99e-16!1;DOID:3978!9.99e-16!1;DOID:3394!9.99e-16!1;DOID:5844!9.99e-16!1;DOID:114!1.61e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!4.59e-46!15;UBERON:0003057!4.59e-46!15;UBERON:0004733!1.36e-42!12;UBERON:0002028!1.36e-42!12;UBERON:0007277!1.36e-42!12;UBERON:0004732!2.58e-39!13;UBERON:0001049!7.54e-34!57;UBERON:0005068!7.54e-34!57;UBERON:0006241!7.54e-34!57;UBERON:0007135!7.54e-34!57;UBERON:0002616!2.23e-27!59;UBERON:0002680!5.20e-26!9;UBERON:0001895!5.20e-26!9;UBERON:0010092!5.20e-26!9;UBERON:0001017!4.90e-23!82;UBERON:0000955!5.58e-23!69;UBERON:0006238!5.58e-23!69;UBERON:0002037!1.97e-22!6;UBERON:0006215!1.97e-22!6;UBERON:0003075!3.34e-22!86;UBERON:0007284!3.34e-22!86;UBERON:0005743!6.15e-22!86;UBERON:0002346!3.55e-21!90;UBERON:0000073!8.54e-20!94;UBERON:0001016!8.54e-20!94;UBERON:0001896!9.53e-20!3;UBERON:0005290!9.53e-20!3;UBERON:0010096!9.53e-20!3;UBERON:0007023!1.50e-19!115;UBERON:0002298!1.49e-16!8;UBERON:0002619!3.38e-15!22;UBERON:0002022!3.66e-15!1;UBERON:0000956!1.89e-13!25;UBERON:0000203!1.89e-13!25;UBERON:0000033!1.43e-12!123;UBERON:0000153!6.10e-12!129;UBERON:0007811!6.10e-12!129;UBERON:0001950!6.01e-11!20;UBERON:0004121!1.29e-10!169;UBERON:0001869!1.34e-10!32;UBERON:0000924!2.40e-10!173;UBERON:0006601!2.40e-10!173;UBERON:0002791!2.75e-10!33;UBERON:0002020!5.42e-10!34;UBERON:0003528!5.42e-10!34;UBERON:0001893!5.42e-10!34;UBERON:0000025!3.32e-09!194;UBERON:0001954!2.48e-08!2;UBERON:0003022!2.48e-08!2;UBERON:0002421!2.48e-08!2;UBERON:0002600!2.48e-08!2;UBERON:0002780!2.54e-08!41;UBERON:0001890!2.54e-08!41;UBERON:0006240!2.54e-08!41;UBERON:0001870!2.87e-08!2;UBERON:0003080!3.98e-08!42;UBERON:0004111!3.82e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.97e-34;12!UBERON:0002028;5.97e-34;12!UBERON:0004732;1.86e-31;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-66,6;UBERON:0006215,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p18@INADL | |short_description=p18@INADL | ||
}} | }} |
Latest revision as of 19:05, 18 September 2015
Short description: | p18@INADL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_INADL_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -165bp_to_uc009wag.2, uc010oot.1_5end |
EntrezGene: | INADL |
HGNC: | 28881 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-66 | 6 |
rhombic lip | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |