FFCP PHASE1:Hg19::chr12:5153088..5153101,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3741 | |EntrezGene=3741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6224 | |HGNC=6224 | ||
|TSSclassifier=strong | |||
|UniProt=P22460 | |UniProt=P22460 | ||
|association_with_transcript=3bp_to_ENST00000252321,NM_002234,uc001qni.2_5end | |association_with_transcript=3bp_to_ENST00000252321,NM_002234,uc001qni.2_5end | ||
|cluster_id=chr12:5153088..5153101,+ | |||
|coexpression_cluster_id=C114 | |coexpression_cluster_id=C114 | ||
|description=CAGE_peak_4_at_KCNA5_5end | |description=CAGE_peak_4_at_KCNA5_5end | ||
|id=chr12:5153088..5153101,+ | |id=chr12:5153088..5153101,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.41e-16;1!UBERON:0004140;1.41e-16;1!UBERON:0005062;3.32e-16;4!UBERON:0007284;3.32e-16;4!UBERON:0004872;8.71e-10;7!UBERON:0006965;3.71e-09;2!UBERON:0010122;5.93e-09;2!UBERON:0007297;5.93e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.05e-77!115;UBERON:0001049!5.88e-41!57;UBERON:0005068!5.88e-41!57;UBERON:0006241!5.88e-41!57;UBERON:0007135!5.88e-41!57;UBERON:0002616!1.52e-34!59;UBERON:0002780!5.57e-33!41;UBERON:0001890!5.57e-33!41;UBERON:0006240!5.57e-33!41;UBERON:0003075!1.77e-32!86;UBERON:0007284!1.77e-32!86;UBERON:0002346!3.25e-32!90;UBERON:0003080!5.16e-32!42;UBERON:0005743!6.72e-30!86;UBERON:0001017!6.74e-30!82;UBERON:0000955!1.48e-27!69;UBERON:0006238!1.48e-27!69;UBERON:0001893!2.16e-26!34;UBERON:0002020!3.80e-26!34;UBERON:0003528!3.80e-26!34;UBERON:0000073!5.22e-26!94;UBERON:0001016!5.22e-26!94;UBERON:0001869!8.97e-26!32;UBERON:0002791!8.09e-25!33;UBERON:0003056!1.70e-21!61;UBERON:0000153!1.05e-19!129;UBERON:0007811!1.05e-19!129;UBERON:0002619!2.74e-19!22;UBERON:0001950!1.53e-18!20;UBERON:0000033!7.32e-18!123;UBERON:0000956!1.45e-16!25;UBERON:0000203!1.45e-16!25;UBERON:0000924!3.10e-16!173;UBERON:0006601!3.10e-16!173;UBERON:0004121!5.46e-16!169;UBERON:0004111!8.81e-12!241;UBERON:0000025!1.06e-11!194;UBERON:0002308!1.41e-11!9;UBERON:0000125!1.41e-11!9;UBERON:0001872!2.90e-11!5;UBERON:0000477!9.80e-11!286;UBERON:0000369!3.68e-10!4;UBERON:0002435!3.68e-10!4;UBERON:0000204!3.68e-10!4;UBERON:0010082!3.68e-10!4;UBERON:0003076!6.08e-10!15;UBERON:0003057!6.08e-10!15;UBERON:0002298!2.05e-09!8;UBERON:0000481!8.04e-09!347;UBERON:0000200!1.45e-08!6;UBERON:0000062!1.65e-08!511;UBERON:0009663!1.73e-08!7;UBERON:0005383!3.57e-08!3;UBERON:0005382!3.57e-08!3;UBERON:0001894!4.94e-08!7;UBERON:0006222!4.94e-08!7;UBERON:0001896!6.04e-08!3;UBERON:0005290!6.04e-08!3;UBERON:0010096!6.04e-08!3;UBERON:0004733!7.63e-08!12;UBERON:0002028!7.63e-08!12;UBERON:0007277!7.63e-08!12;UBERON:0000483!1.22e-07!309;UBERON:0000119!1.91e-07!312;UBERON:0004732!3.74e-07!13;UBERON:0002771!7.80e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!3.05e-77!115;UBERON:0001049!5.88e-41!57;UBERON:0005068!5.88e-41!57;UBERON:0006241!5.88e-41!57;UBERON:0007135!5.88e-41!57;UBERON:0002616!1.52e-34!59;UBERON:0002780!5.57e-33!41;UBERON:0001890!5.57e-33!41;UBERON:0006240!5.57e-33!41;UBERON:0003075!1.77e-32!86;UBERON:0007284!1.77e-32!86;UBERON:0002346!3.25e-32!90;UBERON:0003080!5.16e-32!42;UBERON:0005743!6.72e-30!86;UBERON:0001017!6.74e-30!82;UBERON:0000955!1.48e-27!69;UBERON:0006238!1.48e-27!69;UBERON:0001893!2.16e-26!34;UBERON:0002020!3.80e-26!34;UBERON:0003528!3.80e-26!34;UBERON:0000073!5.22e-26!94;UBERON:0001016!5.22e-26!94;UBERON:0001869!8.97e-26!32;UBERON:0002791!8.09e-25!33;UBERON:0003056!1.70e-21!61;UBERON:0000153!1.05e-19!129;UBERON:0007811!1.05e-19!129;UBERON:0002619!2.74e-19!22;UBERON:0001950!1.53e-18!20;UBERON:0000033!7.32e-18!123;UBERON:0000956!1.45e-16!25;UBERON:0000203!1.45e-16!25;UBERON:0000924!3.10e-16!173;UBERON:0006601!3.10e-16!173;UBERON:0004121!5.46e-16!169;UBERON:0004111!8.81e-12!241;UBERON:0000025!1.06e-11!194;UBERON:0002308!1.41e-11!9;UBERON:0000125!1.41e-11!9;UBERON:0001872!2.90e-11!5;UBERON:0000477!9.80e-11!286;UBERON:0000369!3.68e-10!4;UBERON:0002435!3.68e-10!4;UBERON:0000204!3.68e-10!4;UBERON:0010082!3.68e-10!4;UBERON:0003076!6.08e-10!15;UBERON:0003057!6.08e-10!15;UBERON:0002298!2.05e-09!8;UBERON:0000481!8.04e-09!347;UBERON:0000200!1.45e-08!6;UBERON:0000062!1.65e-08!511;UBERON:0009663!1.73e-08!7;UBERON:0005383!3.57e-08!3;UBERON:0005382!3.57e-08!3;UBERON:0001894!4.94e-08!7;UBERON:0006222!4.94e-08!7;UBERON:0001896!6.04e-08!3;UBERON:0005290!6.04e-08!3;UBERON:0010096!6.04e-08!3;UBERON:0004733!7.63e-08!12;UBERON:0002028!7.63e-08!12;UBERON:0007277!7.63e-08!12;UBERON:0000483!1.22e-07!309;UBERON:0000119!1.91e-07!312;UBERON:0004732!3.74e-07!13;UBERON:0002771!7.80e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.95e-21;3!UBERON:0000946;2.95e-21;3!UBERON:0005383;2.95e-21;3!UBERON:0005382;2.95e-21;3!UBERON:0001874;1.41e-16;1!UBERON:0000998;1.41e-16;1!UBERON:0002135;1.41e-16;1!UBERON:0002146;1.41e-16;1!UBERON:0006868;1.41e-16;1!UBERON:0005623;1.41e-16;1!UBERON:0000369;3.32e-16;4!UBERON:0002435;3.32e-16;4!UBERON:0000204;3.32e-16;4!UBERON:0009663;1.13e-09;7!UBERON:0001873;5.93e-09;2!UBERON:0002133;5.93e-09;2!UBERON:0002420;1.02e-07;9!UBERON:0000125;1.02e-07;9!UBERON:0007245;1.02e-07;9!UBERON:0002308;1.02e-07;9!UBERON:0010009;1.02e-07;9!UBERON:0010011;1.02e-07;9!UBERON:0000454;1.02e-07;9!UBERON:0010313;4.95e-07;10!UBERON:0000948;7.94e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,4.02e-21,3;UBERON:0009751,4.02e-21,3;UBERON:0000946,4.02e-21,3;UBERON:0002523,4.02e-21,3;UBERON:0005983,4.02e-21,3;UBERON:0005383,4.02e-21,3;UBERON:0002165,4.02e-21,3;UBERON:0005382,4.02e-21,3;UBERON:0002062,4.02e-21,3;UBERON:0007280,4.02e-21,3;UBERON:0002135,1.41e-16,1;UBERON:0000998,1.93e-16,1;UBERON:0006868,1.93e-16,1;UBERON:0002146,2.25e-16,1;UBERON:0005623,2.25e-16,1;UBERON:0001874,2.63e-16,1;UBERON:0000369,4.18e-16,4;UBERON:0002435,4.18e-16,4;UBERON:0000204,4.18e-16,4;UBERON:0010082,4.18e-16,4;UBERON:0007023,4.92e-10,114;UBERON:0009663,1.29e-09,7;UBERON:0004797,1.29e-09,7;UBERON:0001873,5.49e-09,2;UBERON:0010122,5.49e-09,2;UBERON:0002133,5.94e-09,2;UBERON:0003075,1.56e-08,82;UBERON:0007284,1.56e-08,82;UBERON:0002346,4.05e-08,86;UBERON:0002420,1.13e-07,9;UBERON:0000125,1.13e-07,9;UBERON:0007245,1.13e-07,9;UBERON:0002308,1.13e-07,9;UBERON:0010009,1.13e-07,9;UBERON:0010011,1.13e-07,9;UBERON:0000454,1.13e-07,9;UBERON:0010313,5.43e-07,10;UBERON:0002342,5.43e-07,10;UBERON:0005062,5.43e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.66943437013739,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,2.59022384726391,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.4471572635049,0,0.110579259931225,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,1.39641200636127,1.14580212005842,0,0.199679000498991,0.858452096273142,0.89268582976749,1.81395375714161,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,0.182248669974074,0,0,0.314727528809989,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.625954653532499,1.72022758707021,0.776503360757966,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.578063025868136,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.807378228159255,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.337687923091973,1.56215619722769,0.413373593002368,0.443910671357348,0.546974809018219,0,0.496211178389294,0,0,0,0.672567444437648,0,0.682986574053893,0,0,0,0.271878931907327,0.263091094251396,0,0,0.627944742804112,1.09980912941201,0,0,0,0,1.28657779517981,0,0,0,0,0,0,0,0.430227358820278,0,0,1.27016115057279,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.203974470572744,0.436350690340377,1.0580536810308,0,0,0,0,0,11.1494680890065,0.101988829741982,0,0.735159196278759,0,0.0757786982182394,0,0.829169439458779,0.517164979309476,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0.404234377916439,0.870866991587845,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.66943437013739,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,2.59022384726391,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.4471572635049,0,0.110579259931225,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,1.39641200636127,1.14580212005842,0,0.199679000498991,0.858452096273142,0.89268582976749,1.81395375714161,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,0.182248669974074,0,0,0.314727528809989,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.625954653532499,1.72022758707021,0.776503360757966,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.578063025868136,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.807378228159255,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.337687923091973,1.56215619722769,0.413373593002368,0.443910671357348,0.546974809018219,0,0.496211178389294,0,0,0,0.672567444437648,0,0.682986574053893,0,0,0,0.271878931907327,0.263091094251396,0,0,0.627944742804112,1.09980912941201,0,0,0,0,1.28657779517981,0,0,0,0,0,0,0,0.430227358820278,0,0,1.27016115057279,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.203974470572744,0.436350690340377,1.0580536810308,0,0,0,0,0,11.1494680890065,0.101988829741982,0,0.735159196278759,0,0.0757786982182394,0,0.829169439458779,0.517164979309476,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0.404234377916439,0.870866991587845,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p4@KCNA5 | |short_description=p4@KCNA5 | ||
}} | }} |
Latest revision as of 19:33, 18 September 2015
Short description: | p4@KCNA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KCNA5_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | 3bp_to_ENST00000252321, NM_002234, uc001qni.2_5end |
EntrezGene: | KCNA5 |
HGNC: | 6224 |
UniProt: | P22460 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data