FFCP PHASE1:Hg19::chr2:87017971..87017982,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=925 | |EntrezGene=925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1706 | |HGNC=1706 | ||
|TSSclassifier=strong | |||
|UniProt=B8ZZZ4 | |UniProt=B8ZZZ4 | ||
|association_with_transcript=-23bp_to_ENST00000409781_5end | |association_with_transcript=-23bp_to_ENST00000409781_5end | ||
|cluster_id=chr2:87017971..87017982,- | |||
|coexpression_cluster_id=C1077 | |||
|description=CAGE_peak_4_at_CD8A_5end | |description=CAGE_peak_4_at_CD8A_5end | ||
|id=chr2:87017971..87017982,- | |id=chr2:87017971..87017982,- | ||
|ontology_enrichment_celltype=CL:0000625!6.25e-22!11;CL:0000738!1.80e-15!140;CL:0000791!1.50e-14!18;CL:0000789!1.50e-14!18;CL:0002420!1.50e-14!18;CL:0002419!1.50e-14!18;CL:0000790!1.50e-14!18;CL:0002087!2.76e-13!119;CL:0000084!4.18e-13!25;CL:0000827!4.18e-13!25;CL:0000037!3.03e-10!172;CL:0000566!3.03e-10!172;CL:0002031!8.82e-10!124;CL:0002032!4.73e-09!165;CL:0000837!4.73e-09!165;CL:0000988!4.97e-09!182;CL:0002057!2.42e-07!42;CL:0000766!3.25e-07!76;CL:0000838!5.25e-07!52;CL:0000623!6.42e-07!3;CL:0000825!6.42e-07!3;CL:0000542!8.66e-07!53;CL:0000051!8.66e-07!53 | |ontology_enrichment_celltype=CL:0000625!6.25e-22!11;CL:0000738!1.80e-15!140;CL:0000791!1.50e-14!18;CL:0000789!1.50e-14!18;CL:0002420!1.50e-14!18;CL:0002419!1.50e-14!18;CL:0000790!1.50e-14!18;CL:0002087!2.76e-13!119;CL:0000084!4.18e-13!25;CL:0000827!4.18e-13!25;CL:0000037!3.03e-10!172;CL:0000566!3.03e-10!172;CL:0002031!8.82e-10!124;CL:0002032!4.73e-09!165;CL:0000837!4.73e-09!165;CL:0000988!4.97e-09!182;CL:0002057!2.42e-07!42;CL:0000766!3.25e-07!76;CL:0000838!5.25e-07!52;CL:0000623!6.42e-07!3;CL:0000825!6.42e-07!3;CL:0000542!8.66e-07!53;CL:0000051!8.66e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.84e-46;11!CL:0000791;1.23e-32;18!CL:0000789;1.23e-32;18!CL:0002419;1.23e-32;18!CL:0000084;9.85e-31;25!CL:0000623;2.38e-13;3!CL:0000542;8.18e-11;53!CL:0000771;6.11e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.88e-46,11;CL:0000791,1.25e-32,18;CL:0000789,1.25e-32,18;CL:0002420,1.25e-32,18;CL:0002419,1.25e-32,18;CL:0000790,1.25e-32,18;CL:0000084,1.12e-30,25;CL:0000827,1.12e-30,25;CL:0000838,9.41e-20,52;CL:0000542,2.66e-19,53;CL:0000051,2.66e-19,53;CL:0000738,3.08e-14,136;CL:0002087,1.97e-13,115;CL:0000623,2.44e-13,3;CL:0000825,2.44e-13,3;CL:0000037,2.21e-10,168;CL:0002031,3.69e-10,120;CL:0000988,1.49e-09,177;CL:0002032,4.95e-09,161;CL:0000837,4.95e-09,161;CL:0000771,5.31e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.23e-32;18!CL:0000051;8.18e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.53e-25!115;UBERON:0000178!1.98e-16!15;UBERON:0000179!1.98e-16!15;UBERON:0000463!1.98e-16!15;UBERON:0002390!1.77e-13!102;UBERON:0003061!1.77e-13!102;UBERON:0002193!2.87e-13!112;UBERON:0004177!3.44e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.84e-30;15!UBERON:0000179;1.84e-30;15!UBERON:0000463;1.84e-30;15!UBERON:0002390;9.98e-23;32!UBERON:0002193;4.04e-16;42!UBERON:0004177;1.55e-13;5!UBERON:0005057;1.55e-13;5!UBERON:0002370;1.09e-09;2!UBERON:0005058;1.09e-09;2!UBERON:0009113;1.09e-09;2!UBERON:0002108;1.81e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.79e-30,15;UBERON:0000179,1.79e-30,15;UBERON:0000463,1.79e-30,15;UBERON:0004177,8.30e-15,7;UBERON:0005057,8.30e-15,7;UBERON:0002193,1.82e-12,108;UBERON:0002390,1.99e-11,98;UBERON:0003061,1.99e-11,98;UBERON:0002370,2.82e-10,4;UBERON:0005058,2.82e-10,4;UBERON:0009113,2.82e-10,4;UBERON:0003295,2.82e-10,4;UBERON:0005562,2.82e-10,4;UBERON:0002108,2.01e-07,4;UBERON:0003351,5.62e-07,6;UBERON:0001042,8.17e-07,10;UBERON:0009145,8.17e-07,10;UBERON:0000974,8.43e-07,10 | |||
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| ||
|short_description=p4@CD8A | |short_description=p4@CD8A | ||
}} | }} |
Latest revision as of 19:39, 18 September 2015
Short description: | p4@CD8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD8A_5end |
Coexpression cluster: | C1077_thymus_CD8_Natural_blood_NK_Peripheral_acute |
Association with transcript: | -23bp_to_ENST00000409781_5end |
EntrezGene: | CD8A |
HGNC: | 1706 |
UniProt: | B8ZZZ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.88e-46 | 11 |
mature alpha-beta T cell | 1.25e-32 | 18 |
alpha-beta T cell | 1.25e-32 | 18 |
immature T cell | 1.25e-32 | 18 |
mature T cell | 1.25e-32 | 18 |
immature alpha-beta T cell | 1.25e-32 | 18 |
T cell | 1.12e-30 | 25 |
pro-T cell | 1.12e-30 | 25 |
lymphoid lineage restricted progenitor cell | 9.41e-20 | 52 |
lymphocyte | 2.66e-19 | 53 |
common lymphoid progenitor | 2.66e-19 | 53 |
leukocyte | 3.08e-14 | 136 |
nongranular leukocyte | 1.97e-13 | 115 |
natural killer cell | 2.44e-13 | 3 |
pro-NK cell | 2.44e-13 | 3 |
hematopoietic stem cell | 2.21e-10 | 168 |
hematopoietic lineage restricted progenitor cell | 3.69e-10 | 120 |
hematopoietic cell | 1.49e-09 | 177 |
hematopoietic oligopotent progenitor cell | 4.95e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.95e-09 | 161 |
eosinophil | 5.31e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.79e-30 | 15 |
haemolymphatic fluid | 1.79e-30 | 15 |
organism substance | 1.79e-30 | 15 |
hemopoietic organ | 8.30e-15 | 7 |
immune organ | 8.30e-15 | 7 |
hemolymphoid system | 1.82e-12 | 108 |
hematopoietic system | 1.99e-11 | 98 |
blood island | 1.99e-11 | 98 |
thymus | 2.82e-10 | 4 |
hemolymphoid system gland | 2.82e-10 | 4 |
thymic region | 2.82e-10 | 4 |
pharyngeal gland | 2.82e-10 | 4 |
thymus primordium | 2.82e-10 | 4 |
small intestine | 2.01e-07 | 4 |
pharyngeal epithelium | 5.62e-07 | 6 |
chordate pharynx | 8.17e-07 | 10 |
pharyngeal region of foregut | 8.17e-07 | 10 |
neck | 8.43e-07 | 10 |