FFCP PHASE1:Hg19::chr2:87018281..87018294,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=925 | |EntrezGene=925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1706 | |HGNC=1706 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETP4 | |UniProt=E7ETP4 | ||
|association_with_transcript=-214bp_to_ENST00000442577_5end | |association_with_transcript=-214bp_to_ENST00000442577_5end | ||
|cluster_id=chr2:87018281..87018294,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_5_at_CD8A_5end | |description=CAGE_peak_5_at_CD8A_5end | ||
|id=chr2:87018281..87018294,- | |id=chr2:87018281..87018294,- | ||
|ontology_enrichment_celltype=CL:0000625!1.03e-44!11;CL:0000791!1.39e-26!18;CL:0000789!1.39e-26!18;CL:0002420!1.39e-26!18;CL:0002419!1.39e-26!18;CL:0000790!1.39e-26!18;CL:0000084!1.25e-22!25;CL:0000827!1.25e-22!25;CL:0000838!1.27e-11!52;CL:0000542!2.35e-11!53;CL:0000051!2.35e-11!53;CL:0000453!1.25e-09!5;CL:0000738!1.31e-09!140;CL:0000842!1.99e-07!3;CL:0002087!3.67e-07!119;CL:0000037!4.82e-07!172;CL:0000566!4.82e-07!172 | |ontology_enrichment_celltype=CL:0000625!1.03e-44!11;CL:0000791!1.39e-26!18;CL:0000789!1.39e-26!18;CL:0002420!1.39e-26!18;CL:0002419!1.39e-26!18;CL:0000790!1.39e-26!18;CL:0000084!1.25e-22!25;CL:0000827!1.25e-22!25;CL:0000838!1.27e-11!52;CL:0000542!2.35e-11!53;CL:0000051!2.35e-11!53;CL:0000453!1.25e-09!5;CL:0000738!1.31e-09!140;CL:0000842!1.99e-07!3;CL:0002087!3.67e-07!119;CL:0000037!4.82e-07!172;CL:0000566!4.82e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.67e-49;11!CL:0000791;3.94e-30;18!CL:0000789;3.94e-30;18!CL:0002419;3.94e-30;18!CL:0000084;2.62e-29;25!CL:0000542;1.35e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.68e-49,11;CL:0000791,3.95e-30,18;CL:0000789,3.95e-30,18;CL:0002420,3.95e-30,18;CL:0002419,3.95e-30,18;CL:0000790,3.95e-30,18;CL:0000084,2.63e-29,25;CL:0000827,2.63e-29,25;CL:0000838,6.59e-14,52;CL:0000542,1.23e-13,53;CL:0000051,1.23e-13,53 | |||
|ontology_enrichment_development_v019=CL:0000790;3.94e-30;18!UBERON:0004872;1.13e-09;7!UBERON:0006965;5.93e-09;2!CL:0000051;1.35e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.16e-15!15;UBERON:0000179!2.16e-15!15;UBERON:0000463!2.16e-15!15;UBERON:0004177!4.32e-12!7;UBERON:0002106!1.22e-07!3;UBERON:0004854!1.22e-07!3;UBERON:0009034!1.22e-07!3;UBERON:0002095!1.22e-07!3;UBERON:0004782!1.22e-07!3;UBERON:0003281!1.22e-07!3;UBERON:0009664!1.22e-07!3;UBERON:0002296!1.22e-07!3;UBERON:0005602!1.22e-07!3;UBERON:0001179!1.22e-07!3;UBERON:0006293!1.22e-07!3;UBERON:0007023!2.13e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.34e-32;2!UBERON:0005058;3.34e-32;2!UBERON:0009113;3.34e-32;2!UBERON:0004177;1.74e-28;5!UBERON:0005057;1.74e-28;5!UBERON:0002390;1.38e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.37e-20,7;UBERON:0005057,1.37e-20,7;UBERON:0002370,1.21e-16,4;UBERON:0005058,1.21e-16,4;UBERON:0009113,1.21e-16,4;UBERON:0003295,1.21e-16,4;UBERON:0005562,1.21e-16,4;UBERON:0003351,2.02e-11,6;UBERON:0000974,3.33e-07,10;UBERON:0003408,3.33e-07,10;UBERON:0001042,3.33e-07,10;UBERON:0009145,3.33e-07,10 | |||
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|short_description=p5@CD8A | |short_description=p5@CD8A | ||
}} | }} |
Latest revision as of 19:45, 18 September 2015
Short description: | p5@CD8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CD8A_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -214bp_to_ENST00000442577_5end |
EntrezGene: | CD8A |
HGNC: | 1706 |
UniProt: | E7ETP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.68e-49 | 11 |
mature alpha-beta T cell | 3.95e-30 | 18 |
alpha-beta T cell | 3.95e-30 | 18 |
immature T cell | 3.95e-30 | 18 |
mature T cell | 3.95e-30 | 18 |
immature alpha-beta T cell | 3.95e-30 | 18 |
T cell | 2.63e-29 | 25 |
pro-T cell | 2.63e-29 | 25 |
lymphoid lineage restricted progenitor cell | 6.59e-14 | 52 |
lymphocyte | 1.23e-13 | 53 |
common lymphoid progenitor | 1.23e-13 | 53 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.37e-20 | 7 |
immune organ | 1.37e-20 | 7 |
thymus | 1.21e-16 | 4 |
hemolymphoid system gland | 1.21e-16 | 4 |
thymic region | 1.21e-16 | 4 |
pharyngeal gland | 1.21e-16 | 4 |
thymus primordium | 1.21e-16 | 4 |
pharyngeal epithelium | 2.02e-11 | 6 |
neck | 3.33e-07 | 10 |
gland of gut | 3.33e-07 | 10 |
chordate pharynx | 3.33e-07 | 10 |
pharyngeal region of foregut | 3.33e-07 | 10 |