FFCP PHASE1:Hg19::chr10:64977081..64977097,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:64977081..64977097,-
|short_description=p9@JMJD1C
|description=CAGE_peak_9_at_JMJD1C_5end
|association_with_transcript=-90bp_to_BC156414_5end
|EntrezGene...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221037 | |EntrezGene=221037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12313 | |HGNC=12313 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-90bp_to_BC156414_5end | |||
|cluster_id=chr10:64977081..64977097,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_9_at_JMJD1C_5end | |||
|id=chr10:64977081..64977097,- | |||
|ontology_enrichment_celltype=CL:0002057!6.93e-20!42;CL:0000860!7.90e-19!45;CL:0002009!4.77e-15!65;CL:0002194!1.97e-14!63;CL:0000576!1.97e-14!63;CL:0000040!1.97e-14!63;CL:0000559!1.97e-14!63;CL:0000766!7.34e-14!76;CL:0000557!1.43e-12!71;CL:0002087!1.61e-12!119;CL:0000738!2.12e-12!140;CL:0000839!3.11e-12!70;CL:0000763!1.17e-11!112;CL:0000049!1.17e-11!112;CL:0002032!1.27e-11!165;CL:0000837!1.27e-11!165;CL:0000037!2.06e-11!172;CL:0000566!2.06e-11!172;CL:0002031!2.15e-11!124;CL:0000988!1.88e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.47e-29;33!CL:0002057;1.47e-29;33!CL:0000473;1.04e-21;39!CL:0000234;1.04e-21;39!CL:0000576;3.26e-15;48!CL:0000766;4.14e-11;69!CL:0002087;6.57e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.39e-30,42;CL:0002057,1.39e-30,42;CL:0000473,1.47e-27,48;CL:0000234,1.47e-27,48;CL:0000766,1.47e-22,72;CL:0002009,1.13e-21,61;CL:0002194,2.77e-21,59;CL:0000576,2.77e-21,59;CL:0000040,2.77e-21,59;CL:0000559,2.77e-21,59;CL:0000738,1.21e-19,136;CL:0002087,6.27e-19,115;CL:0000557,8.84e-19,67;CL:0000839,6.19e-18,66;CL:0002031,2.12e-17,120;CL:0002032,2.91e-16,161;CL:0000837,2.91e-16,161;CL:0000037,8.35e-16,168;CL:0000763,2.17e-15,108;CL:0000049,2.17e-15,108;CL:0000988,3.59e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.72e-09!80;UBERON:0001474!6.21e-08!86;UBERON:0002390!6.83e-08!102;UBERON:0003061!6.83e-08!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.50e-15,76;UBERON:0001474,1.81e-13,82;UBERON:0002390,2.35e-13,98;UBERON:0003061,2.35e-13,98;UBERON:0002193,5.45e-12,108;UBERON:0002405,1.22e-11,93;UBERON:0004765,2.11e-11,90;UBERON:0001434,4.94e-10,100 | |||
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| ||
|short_description=p9@JMJD1C | |||
}} | }} |
Latest revision as of 20:20, 18 September 2015
Short description: | p9@JMJD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_JMJD1C_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -90bp_to_BC156414_5end |
EntrezGene: | JMJD1C |
HGNC: | 12313 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.39e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-30 | 42 |
defensive cell | 1.47e-27 | 48 |
phagocyte | 1.47e-27 | 48 |
myeloid leukocyte | 1.47e-22 | 72 |
macrophage dendritic cell progenitor | 1.13e-21 | 61 |
monopoietic cell | 2.77e-21 | 59 |
monocyte | 2.77e-21 | 59 |
monoblast | 2.77e-21 | 59 |
promonocyte | 2.77e-21 | 59 |
leukocyte | 1.21e-19 | 136 |
nongranular leukocyte | 6.27e-19 | 115 |
granulocyte monocyte progenitor cell | 8.84e-19 | 67 |
myeloid lineage restricted progenitor cell | 6.19e-18 | 66 |
hematopoietic lineage restricted progenitor cell | 2.12e-17 | 120 |
hematopoietic oligopotent progenitor cell | 2.91e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.91e-16 | 161 |
hematopoietic stem cell | 8.35e-16 | 168 |
myeloid cell | 2.17e-15 | 108 |
common myeloid progenitor | 2.17e-15 | 108 |
hematopoietic cell | 3.59e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.50e-15 | 76 |
bone element | 1.81e-13 | 82 |
hematopoietic system | 2.35e-13 | 98 |
blood island | 2.35e-13 | 98 |
hemolymphoid system | 5.45e-12 | 108 |
immune system | 1.22e-11 | 93 |
skeletal element | 2.11e-11 | 90 |
skeletal system | 4.94e-10 | 100 |