FFCP PHASE1:Hg19::chr21:46572430..46572455,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=104 | |EntrezGene=104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=226 | |HGNC=226 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_uc011afo.1_5end | |association_with_transcript=-67bp_to_uc011afo.1_5end | ||
|cluster_id=chr21:46572430..46572455,+ | |||
|coexpression_cluster_id=C237 | |coexpression_cluster_id=C237 | ||
|description=CAGE_peak_3_at_ADARB1_5end | |description=CAGE_peak_3_at_ADARB1_5end | ||
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|ontology_enrichment_celltype=CL:0000037!3.00e-28!172;CL:0000566!3.00e-28!172;CL:0000988!4.47e-26!182;CL:0002032!1.36e-23!165;CL:0000837!1.36e-23!165;CL:0000763!1.02e-17!112;CL:0000049!1.02e-17!112;CL:0000738!1.25e-12!140;CL:0002031!2.51e-11!124;CL:0002087!2.31e-09!119 | |ontology_enrichment_celltype=CL:0000037!3.00e-28!172;CL:0000566!3.00e-28!172;CL:0000988!4.47e-26!182;CL:0002032!1.36e-23!165;CL:0000837!1.36e-23!165;CL:0000763!1.02e-17!112;CL:0000049!1.02e-17!112;CL:0000738!1.25e-12!140;CL:0002031!2.51e-11!124;CL:0002087!2.31e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000235;5.27e-14;6!CL:0000784;1.06e-11;3!CL:0000097;6.29e-11;5!CL:0000763;7.70e-09;100!CL:0000451;1.49e-07;10 | |ontology_enrichment_celltype_v019=CL:0000235;5.27e-14;6!CL:0000784;1.06e-11;3!CL:0000097;6.29e-11;5!CL:0000763;7.70e-09;100!CL:0000451;1.49e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.64e-23,108;CL:0000049,2.64e-23,108;CL:0000037,3.12e-19,168;CL:0000988,5.81e-19,177;CL:0002032,3.49e-15,161;CL:0000837,3.49e-15,161;CL:0000235,5.01e-14,6;CL:0000784,1.01e-11,3;CL:0000097,4.80e-11,5;CL:0002028,4.80e-11,5;CL:0000451,1.40e-07,10;CL:0000557,1.91e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000049;5.60e-08;108 | |ontology_enrichment_development_v019=CL:0000049;5.60e-08;108 | ||
|ontology_enrichment_disease=DOID:8692!4.41e-21!31;DOID:1240!1.90e-19!39;DOID:2531!5.57e-16!51;DOID:0060083!5.57e-16!51 | |ontology_enrichment_disease=DOID:8692!4.41e-21!31;DOID:1240!1.90e-19!39;DOID:2531!5.57e-16!51;DOID:0060083!5.57e-16!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.15e-32;31!DOID:1240;8.94e-26;39!DOID:2531;3.66e-16;51!DOID:0060083;3.66e-16;51 | |ontology_enrichment_disease_v019=DOID:8692;1.15e-32;31!DOID:1240;8.94e-26;39!DOID:2531;3.66e-16;51!DOID:0060083;3.66e-16;51 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,2.90e-34,31;DOID:1240,3.34e-32,39;DOID:2531,7.00e-26,51;DOID:0060083,7.00e-26,51;DOID:0050686,5.59e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.77e-08!57;UBERON:0005068!9.77e-08!57;UBERON:0006241!9.77e-08!57;UBERON:0007135!9.77e-08!57;UBERON:0002616!3.34e-07!59 | |ontology_enrichment_uberon=UBERON:0001049!9.77e-08!57;UBERON:0005068!9.77e-08!57;UBERON:0006241!9.77e-08!57;UBERON:0007135!9.77e-08!57;UBERON:0002616!3.34e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;2.82e-10;3!UBERON:0005290;2.82e-10;3!UBERON:0002370;7.30e-08;2!UBERON:0001905;7.30e-08;2!UBERON:0002757;7.30e-08;2!UBERON:0010134;7.30e-08;2!UBERON:0005058;7.30e-08;2!UBERON:0005408;7.30e-08;2!UBERON:0001899;7.30e-08;2!UBERON:0009113;7.30e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0001896;2.82e-10;3!UBERON:0005290;2.82e-10;3!UBERON:0002370;7.30e-08;2!UBERON:0001905;7.30e-08;2!UBERON:0002757;7.30e-08;2!UBERON:0010134;7.30e-08;2!UBERON:0005058;7.30e-08;2!UBERON:0005408;7.30e-08;2!UBERON:0001899;7.30e-08;2!UBERON:0009113;7.30e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.92e-10,3;UBERON:0005290,2.92e-10,3;UBERON:0010096,2.92e-10,3;UBERON:0001905,1.04e-07,2;UBERON:0002757,1.04e-07,2;UBERON:0010134,1.04e-07,2;UBERON:0005408,1.04e-07,2;UBERON:0001899,1.04e-07,2;UBERON:0002371,3.09e-07,76;UBERON:0002405,4.43e-07,93 | |||
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| ||
|short_description=p3@ADARB1 | |short_description=p3@ADARB1 | ||
}} | }} |
Latest revision as of 20:36, 18 September 2015
Short description: | p3@ADARB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ADARB1_5end |
Coexpression cluster: | C237_acute_breast_testicular_hepatoblastoma_chronic_argyrophil_Bronchial |
Association with transcript: | -67bp_to_uc011afo.1_5end |
EntrezGene: | ADARB1 |
HGNC: | 226 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.64e-23 | 108 |
common myeloid progenitor | 2.64e-23 | 108 |
hematopoietic stem cell | 3.12e-19 | 168 |
hematopoietic cell | 5.81e-19 | 177 |
hematopoietic oligopotent progenitor cell | 3.49e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.49e-15 | 161 |
macrophage | 5.01e-14 | 6 |
plasmacytoid dendritic cell | 1.01e-11 | 3 |
mast cell | 4.80e-11 | 5 |
basophil mast progenitor cell | 4.80e-11 | 5 |
dendritic cell | 1.40e-07 | 10 |
granulocyte monocyte progenitor cell | 1.91e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.92e-10 | 3 |
myelencephalon | 2.92e-10 | 3 |
future myelencephalon | 2.92e-10 | 3 |
pineal body | 1.04e-07 | 2 |
regional part of epithalamus | 1.04e-07 | 2 |
secretory circumventricular organ | 1.04e-07 | 2 |
circumventricular organ | 1.04e-07 | 2 |
epithalamus | 1.04e-07 | 2 |
bone marrow | 3.09e-07 | 76 |
immune system | 4.43e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.90e-34 | 31 |
leukemia | 3.34e-32 | 39 |
hematologic cancer | 7.00e-26 | 51 |
immune system cancer | 7.00e-26 | 51 |
organ system cancer | 5.59e-07 | 137 |