FFCP PHASE1:Hg19::chr1:63989004..63989077,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:63989004..63989077,+ to FFCP PHASE1:Hg19::chr1:63989004..63989077,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84455 | |EntrezGene=84455 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29379 | |HGNC=29379 | ||
|TSSclassifier=strong | |||
|UniProt=A8K855 | |UniProt=A8K855 | ||
|association_with_transcript=0bp_to_ENST00000371088,ENST00000480886,NM_032437,uc001dbf.2_5end | |||
|cluster_id=chr1:63989004..63989077,+ | |||
|description=CAGE_peak_2_at_EFCAB7_5end | |||
|id=chr1:63989004..63989077,+ | |||
|ontology_enrichment_celltype=CL:0000542!5.11e-21!53;CL:0000051!5.11e-21!53;CL:0000838!1.63e-20!52;CL:0000084!4.52e-11!25;CL:0000827!4.52e-11!25;CL:0000791!2.73e-10!18;CL:0000789!2.73e-10!18;CL:0002420!2.73e-10!18;CL:0002419!2.73e-10!18;CL:0000790!2.73e-10!18;CL:0000945!7.61e-10!24;CL:0000826!7.61e-10!24;CL:0000236!2.16e-08!14;CL:0000625!9.71e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.42e-13;53!CL:0000084;2.90e-11;25!CL:0000791;1.26e-10;18!CL:0000789;1.26e-10;18!CL:0002419;1.26e-10;18!CL:0000945;5.60e-10;24!CL:0000236;5.15e-08;13!CL:0000625;5.62e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.26e-21,53;CL:0000051,2.26e-21,53;CL:0000838,7.34e-21,52;CL:0000084,3.03e-11,25;CL:0000827,3.03e-11,25;CL:0000791,1.90e-10,18;CL:0000789,1.90e-10,18;CL:0002420,1.90e-10,18;CL:0002419,1.90e-10,18;CL:0000790,1.90e-10,18;CL:0000945,5.37e-10,24;CL:0000826,5.37e-10,24;CL:0000236,1.62e-08,14;CL:0000625,7.81e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;6.42e-13;53!CL:0000790;1.26e-10;18 | |||
|ontology_enrichment_disease=DOID:162!1.20e-16!235;DOID:14566!8.95e-16!239;DOID:0050687!7.31e-11!143;DOID:0050686!1.92e-09!137;DOID:2531!2.82e-07!51;DOID:0060083!2.82e-07!51;DOID:305!5.38e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.99e-16,235;DOID:14566,3.65e-15,239;DOID:0050687,1.52e-10,143;DOID:0050686,5.29e-09,137;DOID:2531,2.84e-07,51;DOID:0060083,2.84e-07,51;DOID:305,9.37e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.26e-09!115;UBERON:0001049!4.35e-07!57;UBERON:0005068!4.35e-07!57;UBERON:0006241!4.35e-07!57;UBERON:0007135!4.35e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.61e-09,114;UBERON:0001049,8.83e-07,56;UBERON:0005068,8.83e-07,56;UBERON:0006241,8.83e-07,56;UBERON:0007135,8.83e-07,56 | |||
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| ||
|short_description=p2@EFCAB7 | |||
}} | }} |
Latest revision as of 20:52, 18 September 2015
Short description: | p2@EFCAB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EFCAB7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371088, ENST00000480886, NM_032437, uc001dbf.2_5end |
EntrezGene: | EFCAB7 |
HGNC: | 29379 |
UniProt: | A8K855 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.26e-21 | 53 |
common lymphoid progenitor | 2.26e-21 | 53 |
lymphoid lineage restricted progenitor cell | 7.34e-21 | 52 |
T cell | 3.03e-11 | 25 |
pro-T cell | 3.03e-11 | 25 |
mature alpha-beta T cell | 1.90e-10 | 18 |
alpha-beta T cell | 1.90e-10 | 18 |
immature T cell | 1.90e-10 | 18 |
mature T cell | 1.90e-10 | 18 |
immature alpha-beta T cell | 1.90e-10 | 18 |
lymphocyte of B lineage | 5.37e-10 | 24 |
pro-B cell | 5.37e-10 | 24 |
B cell | 1.62e-08 | 14 |
CD8-positive, alpha-beta T cell | 7.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.61e-09 | 114 |
neural tube | 8.83e-07 | 56 |
neural rod | 8.83e-07 | 56 |
future spinal cord | 8.83e-07 | 56 |
neural keel | 8.83e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.99e-16 | 235 |
disease of cellular proliferation | 3.65e-15 | 239 |
cell type cancer | 1.52e-10 | 143 |
organ system cancer | 5.29e-09 | 137 |
hematologic cancer | 2.84e-07 | 51 |
immune system cancer | 2.84e-07 | 51 |
carcinoma | 9.37e-07 | 106 |