FFCP PHASE1:Hg19::chr2:182756633..182756698,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6744 | |EntrezGene=6744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11319 | |HGNC=11319 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000320370_5end | |association_with_transcript=0bp_to_ENST00000320370_5end | ||
|cluster_id=chr2:182756633..182756698,+ | |||
|description=CAGE_peak_1_at_SSFA2_5end | |description=CAGE_peak_1_at_SSFA2_5end | ||
|id=chr2:182756633..182756698,+ | |id=chr2:182756633..182756698,+ | ||
|ontology_enrichment_celltype=CL:0000766!3.66e-18!76;CL:0000557!4.32e-17!71;CL:0000860!2.98e-15!45;CL:0002057!1.23e-14!42;CL:0000839!2.23e-14!70;CL:0002009!3.59e-14!65;CL:0002194!1.25e-13!63;CL:0000576!1.25e-13!63;CL:0000040!1.25e-13!63;CL:0000559!1.25e-13!63;CL:0000763!3.07e-11!112;CL:0000049!3.07e-11!112 | |ontology_enrichment_celltype=CL:0000766!3.66e-18!76;CL:0000557!4.32e-17!71;CL:0000860!2.98e-15!45;CL:0002057!1.23e-14!42;CL:0000839!2.23e-14!70;CL:0002009!3.59e-14!65;CL:0002194!1.25e-13!63;CL:0000576!1.25e-13!63;CL:0000040!1.25e-13!63;CL:0000559!1.25e-13!63;CL:0000763!3.07e-11!112;CL:0000049!3.07e-11!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.98e-12;33!CL:0002057;1.98e-12;33!CL:0000473;8.68e-10;39!CL:0000234;8.68e-10;39!CL:0000576;2.54e-09;48!CL:0000766;1.17e-08;69 | |ontology_enrichment_celltype_v019=CL:0000860;1.98e-12;33!CL:0002057;1.98e-12;33!CL:0000473;8.68e-10;39!CL:0000234;8.68e-10;39!CL:0000576;2.54e-09;48!CL:0000766;1.17e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.06e-17,72;CL:0000557,5.83e-16,67;CL:0000860,1.23e-14,42;CL:0002057,1.23e-14,42;CL:0000473,6.94e-14,48;CL:0000234,6.94e-14,48;CL:0000839,2.77e-13,66;CL:0002009,4.47e-13,61;CL:0002194,1.54e-12,59;CL:0000576,1.54e-12,59;CL:0000040,1.54e-12,59;CL:0000559,1.54e-12,59;CL:0000763,2.67e-10,108;CL:0000049,2.67e-10,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.81e-11;42 | |ontology_enrichment_development_v019=CL:0002057;6.81e-11;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.13e-18!625;UBERON:0000480!1.51e-18!626;UBERON:0000062!3.53e-17!511;UBERON:0000468!5.60e-15!659;UBERON:0002050!6.40e-15!605;UBERON:0005423!6.40e-15!605;UBERON:0000923!9.75e-15!604;UBERON:0005291!9.75e-15!604;UBERON:0006598!9.75e-15!604;UBERON:0002532!9.75e-15!604;UBERON:0002371!5.29e-14!80;UBERON:0000922!1.73e-13!612;UBERON:0004765!1.97e-12!101;UBERON:0001434!1.97e-12!101;UBERON:0001474!2.39e-12!86;UBERON:0002405!2.76e-11!115;UBERON:0000926!1.12e-09!448;UBERON:0004120!1.12e-09!448;UBERON:0006603!1.12e-09!448;UBERON:0002390!4.92e-09!102;UBERON:0003061!4.92e-09!102;UBERON:0002193!1.00e-08!112;UBERON:0004119!2.55e-08!169;UBERON:0000925!2.55e-08!169;UBERON:0006595!2.55e-08!169;UBERON:0003081!3.37e-08!216;UBERON:0001007!5.30e-08!155;UBERON:0001555!5.30e-08!155;UBERON:0007026!5.30e-08!155;UBERON:0002204!9.64e-08!167 | |ontology_enrichment_uberon=UBERON:0000467!1.13e-18!625;UBERON:0000480!1.51e-18!626;UBERON:0000062!3.53e-17!511;UBERON:0000468!5.60e-15!659;UBERON:0002050!6.40e-15!605;UBERON:0005423!6.40e-15!605;UBERON:0000923!9.75e-15!604;UBERON:0005291!9.75e-15!604;UBERON:0006598!9.75e-15!604;UBERON:0002532!9.75e-15!604;UBERON:0002371!5.29e-14!80;UBERON:0000922!1.73e-13!612;UBERON:0004765!1.97e-12!101;UBERON:0001434!1.97e-12!101;UBERON:0001474!2.39e-12!86;UBERON:0002405!2.76e-11!115;UBERON:0000926!1.12e-09!448;UBERON:0004120!1.12e-09!448;UBERON:0006603!1.12e-09!448;UBERON:0002390!4.92e-09!102;UBERON:0003061!4.92e-09!102;UBERON:0002193!1.00e-08!112;UBERON:0004119!2.55e-08!169;UBERON:0000925!2.55e-08!169;UBERON:0006595!2.55e-08!169;UBERON:0003081!3.37e-08!216;UBERON:0001007!5.30e-08!155;UBERON:0001555!5.30e-08!155;UBERON:0007026!5.30e-08!155;UBERON:0002204!9.64e-08!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,2.48e-14,564;UBERON:0000923,1.47e-13,560;UBERON:0010316,1.47e-13,560;UBERON:0005291,1.47e-13,560;UBERON:0006598,1.47e-13,560;UBERON:0010317,1.47e-13,560;UBERON:0002532,1.47e-13,560;UBERON:0002371,6.22e-13,76;UBERON:0005423,7.23e-13,581;UBERON:0000922,8.57e-13,592;UBERON:0004765,2.03e-11,90;UBERON:0001474,2.50e-11,82;UBERON:0001434,2.75e-11,100;UBERON:0002405,4.74e-10,93;UBERON:0003081,1.98e-08,203;UBERON:0002390,3.75e-08,98;UBERON:0003061,3.75e-08,98;UBERON:0002193,7.07e-08,108;UBERON:0004119,3.93e-07,160;UBERON:0000925,3.93e-07,160;UBERON:0006595,3.93e-07,160;UBERON:0002204,6.11e-07,167;UBERON:0001007,6.85e-07,145;UBERON:0001555,6.85e-07,145;UBERON:0007026,6.85e-07,145 | |||
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| ||
|short_description=p1@SSFA2 | |short_description=p1@SSFA2 | ||
}} | }} |
Latest revision as of 21:36, 18 September 2015
Short description: | p1@SSFA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SSFA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000320370_5end |
EntrezGene: | SSFA2 |
HGNC: | 11319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.06e-17 | 72 |
granulocyte monocyte progenitor cell | 5.83e-16 | 67 |
classical monocyte | 1.23e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-14 | 42 |
defensive cell | 6.94e-14 | 48 |
phagocyte | 6.94e-14 | 48 |
myeloid lineage restricted progenitor cell | 2.77e-13 | 66 |
macrophage dendritic cell progenitor | 4.47e-13 | 61 |
monopoietic cell | 1.54e-12 | 59 |
monocyte | 1.54e-12 | 59 |
monoblast | 1.54e-12 | 59 |
promonocyte | 1.54e-12 | 59 |
myeloid cell | 2.67e-10 | 108 |
common myeloid progenitor | 2.67e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
embryonic structure | 2.48e-14 | 564 |
germ layer | 1.47e-13 | 560 |
germ layer / neural crest | 1.47e-13 | 560 |
embryonic tissue | 1.47e-13 | 560 |
presumptive structure | 1.47e-13 | 560 |
germ layer / neural crest derived structure | 1.47e-13 | 560 |
epiblast (generic) | 1.47e-13 | 560 |
bone marrow | 6.22e-13 | 76 |
developing anatomical structure | 7.23e-13 | 581 |
embryo | 8.57e-13 | 592 |
skeletal element | 2.03e-11 | 90 |
bone element | 2.50e-11 | 82 |
skeletal system | 2.75e-11 | 100 |
immune system | 4.74e-10 | 93 |
lateral plate mesoderm | 1.98e-08 | 203 |
hematopoietic system | 3.75e-08 | 98 |
blood island | 3.75e-08 | 98 |
hemolymphoid system | 7.07e-08 | 108 |
endoderm-derived structure | 3.93e-07 | 160 |
endoderm | 3.93e-07 | 160 |
presumptive endoderm | 3.93e-07 | 160 |
musculoskeletal system | 6.11e-07 | 167 |
digestive system | 6.85e-07 | 145 |
digestive tract | 6.85e-07 | 145 |
primitive gut | 6.85e-07 | 145 |