FFCP PHASE1:Hg19::chr1:67217919..67217946,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200132 | |EntrezGene=200132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26882 | |HGNC=26882 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N7M0 | |UniProt=Q8N7M0 | ||
|association_with_transcript=-193bp_to_NM_152665,uc001dcv.2,uc009wau.2,uc009wav.2_5end | |association_with_transcript=-193bp_to_NM_152665,uc001dcv.2,uc009wau.2,uc009wav.2_5end | ||
|cluster_id=chr1:67217919..67217946,+ | |||
|coexpression_cluster_id=C237 | |coexpression_cluster_id=C237 | ||
|description=CAGE_peak_3_at_TCTEX1D1_5end | |description=CAGE_peak_3_at_TCTEX1D1_5end | ||
|id=chr1:67217919..67217946,+ | |id=chr1:67217919..67217946,+ | ||
|ontology_enrichment_celltype=CL:0000763!2.31e-26!112;CL:0000049!2.31e-26!112;CL:0000766!5.49e-16!76;CL:0000557!8.45e-16!71;CL:0002057!4.16e-15!42;CL:0000839!6.55e-15!70;CL:0000860!1.52e-13!45;CL:0002194!7.82e-13!63;CL:0000576!7.82e-13!63;CL:0000040!7.82e-13!63;CL:0000559!7.82e-13!63;CL:0000037!3.02e-12!172;CL:0000566!3.02e-12!172;CL:0002009!3.78e-12!65;CL:0002032!3.94e-12!165;CL:0000837!3.94e-12!165;CL:0000988!1.16e-10!182 | |ontology_enrichment_celltype=CL:0000763!2.31e-26!112;CL:0000049!2.31e-26!112;CL:0000766!5.49e-16!76;CL:0000557!8.45e-16!71;CL:0002057!4.16e-15!42;CL:0000839!6.55e-15!70;CL:0000860!1.52e-13!45;CL:0002194!7.82e-13!63;CL:0000576!7.82e-13!63;CL:0000040!7.82e-13!63;CL:0000559!7.82e-13!63;CL:0000037!3.02e-12!172;CL:0000566!3.02e-12!172;CL:0002009!3.78e-12!65;CL:0002032!3.94e-12!165;CL:0000837!3.94e-12!165;CL:0000988!1.16e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000763;3.36e-19;100!CL:0000097;4.92e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.23e-37,108;CL:0000049,3.23e-37,108;CL:0000037,2.05e-23,168;CL:0002032,7.35e-23,161;CL:0000837,7.35e-23,161;CL:0000988,6.93e-22,177;CL:0000557,1.97e-09,67;CL:0000097,3.76e-09,5;CL:0002028,3.76e-09,5;CL:0000766,1.56e-08,72;CL:0000134,2.41e-08,354;CL:0002320,4.76e-08,361;CL:0000839,4.87e-08,66;CL:0000034,2.58e-07,441;CL:0000219,5.21e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000049;5.82e-15;108 | |||
|ontology_enrichment_disease=DOID:8692!1.85e-17!31;DOID:1240!2.32e-12!39;DOID:2531!7.11e-08!51;DOID:0060083!7.11e-08!51 | |ontology_enrichment_disease=DOID:8692!1.85e-17!31;DOID:1240!2.32e-12!39;DOID:2531!7.11e-08!51;DOID:0060083!7.11e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.22e-58;31!DOID:1240;6.44e-35;39!DOID:2531;1.43e-22;51!DOID:0060083;1.43e-22;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.54e-61,31;DOID:1240,1.63e-47,39;DOID:2531,3.11e-35,51;DOID:0060083,3.11e-35,51;DOID:0050686,3.92e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.11e-23!115;UBERON:0002390!1.96e-15!102;UBERON:0003061!1.96e-15!102;UBERON:0002193!3.70e-15!112;UBERON:0002371!7.25e-14!80;UBERON:0001474!4.11e-12!86;UBERON:0002405!1.40e-10!115;UBERON:0001049!2.07e-10!57;UBERON:0005068!2.07e-10!57;UBERON:0006241!2.07e-10!57;UBERON:0007135!2.07e-10!57;UBERON:0004765!9.78e-09!101;UBERON:0001434!9.78e-09!101;UBERON:0002616!4.29e-08!59;UBERON:0003081!4.49e-08!216;UBERON:0002780!1.18e-07!41;UBERON:0001890!1.18e-07!41;UBERON:0006240!1.18e-07!41;UBERON:0003075!1.81e-07!86;UBERON:0007284!1.81e-07!86;UBERON:0002346!1.86e-07!90;UBERON:0003080!2.38e-07!42;UBERON:0002020!4.42e-07!34;UBERON:0003528!4.42e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!4.11e-23!115;UBERON:0002390!1.96e-15!102;UBERON:0003061!1.96e-15!102;UBERON:0002193!3.70e-15!112;UBERON:0002371!7.25e-14!80;UBERON:0001474!4.11e-12!86;UBERON:0002405!1.40e-10!115;UBERON:0001049!2.07e-10!57;UBERON:0005068!2.07e-10!57;UBERON:0006241!2.07e-10!57;UBERON:0007135!2.07e-10!57;UBERON:0004765!9.78e-09!101;UBERON:0001434!9.78e-09!101;UBERON:0002616!4.29e-08!59;UBERON:0003081!4.49e-08!216;UBERON:0002780!1.18e-07!41;UBERON:0001890!1.18e-07!41;UBERON:0006240!1.18e-07!41;UBERON:0003075!1.81e-07!86;UBERON:0007284!1.81e-07!86;UBERON:0002346!1.86e-07!90;UBERON:0003080!2.38e-07!42;UBERON:0002020!4.42e-07!34;UBERON:0003528!4.42e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002081;8.86e-11;2!UBERON:0004151;1.84e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,7.45e-11,2;UBERON:0010227,7.45e-11,2;UBERON:0002371,1.71e-09,76;UBERON:0001474,1.34e-08,82;UBERON:0002384,1.20e-07,371;UBERON:0004765,1.35e-07,90;UBERON:0004151,1.64e-07,3;UBERON:0002405,2.89e-07,93;UBERON:0002390,9.27e-07,98;UBERON:0003061,9.27e-07,98 | |||
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| ||
|short_description=p3@TCTEX1D1 | |short_description=p3@TCTEX1D1 | ||
}} | }} |
Latest revision as of 01:13, 19 September 2015
Short description: | p3@TCTEX1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TCTEX1D1_5end |
Coexpression cluster: | C237_acute_breast_testicular_hepatoblastoma_chronic_argyrophil_Bronchial |
Association with transcript: | -193bp_to_NM_152665, uc001dcv.2, uc009wau.2, uc009wav.2_5end |
EntrezGene: | TCTEX1D1 |
HGNC: | 26882 |
UniProt: | Q8N7M0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.23e-37 | 108 |
common myeloid progenitor | 3.23e-37 | 108 |
hematopoietic stem cell | 2.05e-23 | 168 |
hematopoietic oligopotent progenitor cell | 7.35e-23 | 161 |
hematopoietic multipotent progenitor cell | 7.35e-23 | 161 |
hematopoietic cell | 6.93e-22 | 177 |
granulocyte monocyte progenitor cell | 1.97e-09 | 67 |
mast cell | 3.76e-09 | 5 |
basophil mast progenitor cell | 3.76e-09 | 5 |
myeloid leukocyte | 1.56e-08 | 72 |
mesenchymal cell | 2.41e-08 | 354 |
connective tissue cell | 4.76e-08 | 361 |
myeloid lineage restricted progenitor cell | 4.87e-08 | 66 |
stem cell | 2.58e-07 | 441 |
motile cell | 5.21e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 7.45e-11 | 2 |
future cardiac atrium | 7.45e-11 | 2 |
bone marrow | 1.71e-09 | 76 |
bone element | 1.34e-08 | 82 |
connective tissue | 1.20e-07 | 371 |
skeletal element | 1.35e-07 | 90 |
cardiac chamber | 1.64e-07 | 3 |
immune system | 2.89e-07 | 93 |
hematopoietic system | 9.27e-07 | 98 |
blood island | 9.27e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.54e-61 | 31 |
leukemia | 1.63e-47 | 39 |
hematologic cancer | 3.11e-35 | 51 |
immune system cancer | 3.11e-35 | 51 |
organ system cancer | 3.92e-10 | 137 |