FFCP PHASE1:Hg19::chr6:45390343..45390388,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=860 | |EntrezGene=860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10472 | |HGNC=10472 | ||
|TSSclassifier=strong | |||
|UniProt=Q32MY8 | |UniProt=Q32MY8 | ||
|association_with_transcript=29bp_to_BC108919,BC108920,BC160022_5end | |association_with_transcript=29bp_to_BC108919,BC108920,BC160022_5end | ||
|cluster_id=chr6:45390343..45390388,+ | |||
|coexpression_cluster_id=C2860 | |||
|description=CAGE_peak_10_at_RUNX2_5end | |description=CAGE_peak_10_at_RUNX2_5end | ||
|id=chr6:45390343..45390388,+ | |id=chr6:45390343..45390388,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.06e-09!140;CL:0000791!8.45e-09!18;CL:0000789!8.45e-09!18;CL:0002420!8.45e-09!18;CL:0002419!8.45e-09!18;CL:0000790!8.45e-09!18;CL:0000766!1.55e-08!76;CL:0000084!2.87e-08!25;CL:0000827!2.87e-08!25;CL:0000988!5.43e-08!182;CL:0000625!1.10e-07!11;CL:0000037!1.23e-07!172;CL:0000566!1.23e-07!172 | |ontology_enrichment_celltype=CL:0000738!1.06e-09!140;CL:0000791!8.45e-09!18;CL:0000789!8.45e-09!18;CL:0002420!8.45e-09!18;CL:0002419!8.45e-09!18;CL:0000790!8.45e-09!18;CL:0000766!1.55e-08!76;CL:0000084!2.87e-08!25;CL:0000827!2.87e-08!25;CL:0000988!5.43e-08!182;CL:0000625!1.10e-07!11;CL:0000037!1.23e-07!172;CL:0000566!1.23e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.33e-12;18!CL:0000789;3.33e-12;18!CL:0002419;3.33e-12;18!CL:0000625;1.31e-11;11!CL:0000084;2.13e-11;25!CL:0000094;1.10e-09;8!CL:0000081;2.75e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.78e-14,136;CL:0000988,5.49e-14,177;CL:0000037,1.87e-12,168;CL:0000791,2.23e-12,18;CL:0000789,2.23e-12,18;CL:0002420,2.23e-12,18;CL:0002419,2.23e-12,18;CL:0000790,2.23e-12,18;CL:0000625,8.01e-12,11;CL:0000084,2.27e-11,25;CL:0000827,2.27e-11,25;CL:0002032,8.33e-10,161;CL:0000837,8.33e-10,161;CL:0000094,8.37e-10,8;CL:0000766,9.52e-09,72;CL:0002087,1.13e-08,115;CL:0000081,2.28e-08,11;CL:0002031,4.89e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.33e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.19e-10!102;UBERON:0003061!2.19e-10!102;UBERON:0002193!1.09e-08!112;UBERON:0000178!1.44e-08!15;UBERON:0000179!1.44e-08!15;UBERON:0000463!1.44e-08!15;UBERON:0007023!4.90e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!2.19e-10!102;UBERON:0003061!2.19e-10!102;UBERON:0002193!1.09e-08!112;UBERON:0000178!1.44e-08!15;UBERON:0000179!1.44e-08!15;UBERON:0000463!1.44e-08!15;UBERON:0007023!4.90e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.18e-13;15!UBERON:0000179;1.18e-13;15!UBERON:0000463;1.18e-13;15!UBERON:0002390;6.71e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.04e-14,15;UBERON:0000179,5.04e-14,15;UBERON:0000463,5.04e-14,15;UBERON:0002390,3.41e-11,98;UBERON:0003061,3.41e-11,98;UBERON:0002193,2.75e-10,108 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.422863212287913,0,0.446961094427288,0,0,0,0.261185628199839,0.491467873003018,0,0.436882744260345,0.263766978228454,0.618831764800233,0.331397375727916,0.672325146451775,0,0,0.487932798790507,3.0780264519197,2.04000691244253,2.5076377718247,0.85870796139317,1.09499540058307,0.376627918784408,0,0,0,1.57345710739562,3.83829398097213,2.16742572642506,0,0,0,0,0,3.81680571135301,2.21598163412751,3.20871115952227,1.95309783644267,0.447830948479849,1.94336199611388,1.28787783817093,0.726991193897824,1.13362783106643,1.69808842831471,1.39457422143411,1.6446715520873,0.929119112685311,0.863077176966451,0.512321413058201,0.709446689665756,0.344745680736619,1.93645405075148,0,0.564727018627814,0,0.449446968890169,0.306083892370903,1.28371610830437,0.639337125799041,0.659702600373432,0.398927315243264,1.70489900213078,0.580418477257168,1.70215567407342,0,0.75374599577023,0.521482918420201,1.08594422352558,0,1.47311054395026,1.26584954976354,0.422510572623884,0.850417199860174,0,0.898629049171961,1.50176892841506,1.6072558669708,0,0,0.365328307529268,0,0,0.889509253863555,0,0,0,0.661044872784862,0,0,0,0,5.28685314316103,2.80254281490768,2.89722493252585,3.34406609193516,4.32311839024081,4.31763147898969,1.00311897234407,0,0,0,4.01077644786625,0.589211814949674,1.55073726208535,2.43723477388514,1.15282187753108,1.30059347559878,2.13769275984779,1.93445012450094,0.289803085735052,0.14828656316206,1.07016331235885,0,4.87230173599535,3.83220493601921,3.4362744548263,4.55435445635105,1.91139248594458,3.90650072313851,3.8018081777935,2.55977702432214,2.68771883424279,1.24930726552346,3.78843603270427,3.28451198768419,9.07230344511296,8.82552646085574,4.48955652036677,2.43806866313962,1.34140171940727,0.255725123687061,0,0,0,0.795285947051099,0,1.79616152611729,1.99556457716308,2.54720878510066,0.523916301990851,0,0,0.649094787309367,0.870648686496336,0.26591592103773,24.8030249277556,13.1558829479429,13.0010125465348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,3.87780264148325,0,0,0.12663051166458,0.662045904066094,0.573673241497627,0.354668382198357,0.560677600142307,0,1.2333377420858,0.622422070799533,0.404132016209064,0.326923806226917,0.756787138224657,0.576175924479999,0.234321431833797,0.312160076830321,0,0.149448680551801,0.822041490506354,0.809364721840658,0.421352420106746,0.408308342509787,0.491337269247072,0.929932030581889,0,0.989067717114227,0,0.718618141816238,0.841680569770331,1.37630371859161,0.831192346452549,3.07284334616587,1.83892677479412,0.300476117813194,0.453728732640084,0.717558542755448,0.640672166455702,1.05965950579781,0.600182192168805,0.618315175430633,0,0.18611685633159,0.506328996723799,0.487185025805993,0.757301322732344,0.920498986422993,0,0,0.705264687593482,0.339121184620975,0,0.272746120590835,0,0,0,0,0,0,0,3.12899064659632,2.57296375277154,1.38134921352481,1.39310378409594,0,0,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,0,0,0.982827216677626,0,0,0,0.857839051492628,0,0,0.201057944823262,0.185176890317059,0.651616610620649,0,0,1.27523445472584,1.05667824812239,0,0,0,0,0,1.23108503043699,0.234004265139238,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0.492663237895943,0.264145302039678,8.08579650609011,25.3651118013852,10.6043644078159,0.253991577168676,0.763976851116555,0,0,0.205654985406647,0,0,0.448524337381443,0,0.36669142910475,0,0,2.535908257668,0.531876233169741,1.04007436911366,0.771622122786426,0,1.0656887160644,0,1.08524321078289,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0.579125226670317,0.61642896765115,0.716243852959582,0.784596007954691,5.12279976525011,5.17506179662842,2.95188983443421,0,0,0,0,0,20.2231896465739,23.932916736322,24.0360997792901,0.981531933753119,0.500170521059677,0.271265023699736,0.831883446123229,1.60586089917446,0.630809660135739,0.234282829985426,0,0,0,1.99267679560631,0.184369168541703,0.781952530212746,0.391602314925481,0,2.27444828735176,1.50999940573032,6.08347079479633,0,0,0.30239029332968,0.496215615637554,1.07423381301644,0.561320188866147,0.512556597022804,0.511707249066704,0,1.48418066444991,0.771048469013278,0,0.657017248110473,0,0.464841513839837,0,0.40101294060657,0.184161977871793,1.03333003348146,0.364182336013434,0.393373244878272,0,0.0770153371044148,2.35304930753057,0,0.844413031143006,0,0,0.431831832204279,1.54227252690289,1.08378575017541,3.51182841698397,0.254876273045038,0,1.56712328305525,0,0,0,0,0,0.515205058238611,2.1060976908219,2.31026599777646,0,0,0,0.773365746336976,0.616194468458578,0.15350367472613,0.551346289938122,2.57808587683857,0.870100163485371,0.767039646744908,0.712256285173899,0.165284915360978,0.192190067365106,0.510450849978337,0,0,0,0,0.616067160352178,0,0,0,0,0.744316738719335,0.316379424718726,1.71567174531442,0.767693373934002,0.42793898803392,0.636406495851874,0,1.61885211824983,1.37268514868027,1.06031162111118,0.202182481573316,0,0,0.48763373908959,0.243713489631284,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| ||
|short_description=p10@RUNX2 | |short_description=p10@RUNX2 | ||
}} | }} |
Latest revision as of 01:28, 19 September 2015
Short description: | p10@RUNX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RUNX2_5end |
Coexpression cluster: | C2860_Dendritic_Mast_granulocyte_Neutrophils_gall_anaplastic_pagetoid |
Association with transcript: | 29bp_to_BC108919, BC108920, BC160022_5end |
EntrezGene: | RUNX2 |
HGNC: | 10472 |
UniProt: | Q32MY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.78e-14 | 136 |
hematopoietic cell | 5.49e-14 | 177 |
hematopoietic stem cell | 1.87e-12 | 168 |
mature alpha-beta T cell | 2.23e-12 | 18 |
alpha-beta T cell | 2.23e-12 | 18 |
immature T cell | 2.23e-12 | 18 |
mature T cell | 2.23e-12 | 18 |
immature alpha-beta T cell | 2.23e-12 | 18 |
CD8-positive, alpha-beta T cell | 8.01e-12 | 11 |
T cell | 2.27e-11 | 25 |
pro-T cell | 2.27e-11 | 25 |
hematopoietic oligopotent progenitor cell | 8.33e-10 | 161 |
hematopoietic multipotent progenitor cell | 8.33e-10 | 161 |
granulocyte | 8.37e-10 | 8 |
myeloid leukocyte | 9.52e-09 | 72 |
nongranular leukocyte | 1.13e-08 | 115 |
blood cell | 2.28e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 4.89e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 5.04e-14 | 15 |
haemolymphatic fluid | 5.04e-14 | 15 |
organism substance | 5.04e-14 | 15 |
hematopoietic system | 3.41e-11 | 98 |
blood island | 3.41e-11 | 98 |
hemolymphoid system | 2.75e-10 | 108 |