FFCP PHASE1:Hg19::chr19:48673532..48673543,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3978 | |EntrezGene=3978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6598 | |HGNC=6598 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000544761_5end | |association_with_transcript=0bp_to_ENST00000544761_5end | ||
|cluster_id=chr19:48673532..48673543,- | |||
|description=CAGE_peak_3_at_LIG1_5end | |description=CAGE_peak_3_at_LIG1_5end | ||
|id=chr19:48673532..48673543,- | |id=chr19:48673532..48673543,- | ||
|ontology_enrichment_celltype=CL:0002139;2.34e-07;24!CL:0000071;8.22e-07;18!CL:0000115;9.03e-07;36 | |ontology_enrichment_celltype=CL:0000066!1.26e-08!254;CL:0000003!9.22e-08!722;CL:0000213!3.59e-07!57;CL:0000215!3.59e-07!57;CL:0000063!5.04e-07!578;CL:0000012!6.06e-07!682;CL:0000115!6.96e-07!35;CL:0000548!8.73e-07!679;CL:0000004!8.73e-07!679;CL:0000255!8.73e-07!679;CL:0002139!9.63e-07!24 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;2.34e-07;24!CL:0000071;8.22e-07;18!CL:0000115;9.03e-07;36 | ||
|ontology_enrichment_disease=DOID:1240;3.82e-13;39!DOID:2531;1.60e-12;51!DOID:0060083;1.60e-12;51!DOID:8692;1.14e-11;31!DOID:0060058;8.21e-08;10 | |ontology_enrichment_celltype_v019_2=CL:0000115,1.34e-07,36;CL:0002139,4.23e-07,24;CL:0000071,9.97e-07,18;CL:0002546,9.97e-07,18 | ||
|ontology_enrichment_uberon=UBERON:0001737;5.05e-07;9!UBERON:0001557;5.05e-07;9!UBERON:0004638;8.22e-07;18!UBERON:0001986;8.22e-07;18!UBERON:0004852;8.22e-07;18 | |ontology_enrichment_development_v019=CL:0002546;8.22e-07;18 | ||
|ontology_enrichment_disease=DOID:162!3.65e-17!235;DOID:2531!9.71e-17!51;DOID:0060083!9.71e-17!51;DOID:14566!3.33e-16!239;DOID:1240!5.65e-14!39;DOID:8692!6.59e-11!31;DOID:0050686!1.28e-10!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.82e-13;39!DOID:2531;1.60e-12;51!DOID:0060083;1.60e-12;51!DOID:8692;1.14e-11;31!DOID:0060058;8.21e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.10e-20,51;DOID:0060083,3.10e-20,51;DOID:162,1.05e-16,235;DOID:1240,2.25e-16,39;DOID:14566,4.04e-16,239;DOID:8692,5.36e-12,31;DOID:0050686,2.06e-09,137;DOID:0060058,4.81e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.05e-07;9!UBERON:0001557;5.05e-07;9!UBERON:0004638;8.22e-07;18!UBERON:0001986;8.22e-07;18!UBERON:0004852;8.22e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.47e-07,9;UBERON:0004638,9.97e-07,18;UBERON:0001986,9.97e-07,18;UBERON:0004852,9.97e-07,18 | |||
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| ||
|short_description=p3@LIG1 | |short_description=p3@LIG1 | ||
}} | }} |
Latest revision as of 01:31, 19 September 2015
Short description: | p3@LIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LIG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000544761_5end |
EntrezGene: | LIG1 |
HGNC: | 6598 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.34e-07 | 36 |
endothelial cell of vascular tree | 4.23e-07 | 24 |
blood vessel endothelial cell | 9.97e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.97e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.47e-07 | 9 |
blood vessel endothelium | 9.97e-07 | 18 |
endothelium | 9.97e-07 | 18 |
cardiovascular system endothelium | 9.97e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.10e-20 | 51 |
immune system cancer | 3.10e-20 | 51 |
cancer | 1.05e-16 | 235 |
leukemia | 2.25e-16 | 39 |
disease of cellular proliferation | 4.04e-16 | 239 |
myeloid leukemia | 5.36e-12 | 31 |
organ system cancer | 2.06e-09 | 137 |
lymphoma | 4.81e-08 | 10 |