FFCP PHASE1:Hg19::chr10:72977983..72978023,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=728978 | |EntrezGene=728978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_038453_5end | |association_with_transcript=0bp_to_NR_038453_5end | ||
|cluster_id=chr10:72977983..72978023,- | |||
|description=CAGE_peak_2_at_LOC728978_5end | |description=CAGE_peak_2_at_LOC728978_5end | ||
|id=chr10:72977983..72978023,- | |id=chr10:72977983..72978023,- | ||
|ontology_enrichment_celltype=CL:0000076!5.06e-09!62;CL:0002139!1.31e-08!24 | |ontology_enrichment_celltype=CL:0000076!5.06e-09!62;CL:0002139!1.31e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.52e-09;24!CL:0000115;8.46e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.00e-09,24;CL:0000115,1.19e-08,36;CL:0000076,3.81e-07,63;CL:0002078,4.26e-07,45;CL:0000213,9.33e-07,58;CL:0000215,9.33e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.96e-10!241;UBERON:0000468!6.52e-09!659;UBERON:0000483!1.21e-07!309;UBERON:0002619!2.20e-07!22;UBERON:0000119!3.27e-07!312;UBERON:0000477!7.47e-07!286 | |ontology_enrichment_uberon=UBERON:0004111!1.96e-10!241;UBERON:0000468!6.52e-09!659;UBERON:0000483!1.21e-07!309;UBERON:0002619!2.20e-07!22;UBERON:0000119!3.27e-07!312;UBERON:0000477!7.47e-07!286 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,3.98e-07,68 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.845726424575827,0,0,0,0,0,0,0,0,0,0.263766978228454,0.74259811776028,0.331397375727916,2.01697543935533,1.20538905604795,1.46062018077475,0,0.246242116153576,0,0.626909442956176,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0,0.175669571386252,0.327447688744282,1.09288586487763,0.741568885568859,0,0,0,0,0,0,0.993812036833525,0.860234595106124,1.38856200643038,0,2.09749718104953,2.75118041940067,1.67195973229448,1.29208379584664,0.35576626268671,0.33472061276467,10.0707329277287,1.52054421143703,10.9827925896676,0,4.0507097394088,0.17859945656816,0.22452937262617,0.675668882899933,0,1.89853131913626,0.732806975721629,0,0,0,0.993943903390637,0.759783069987479,0.397227542439656,0.286836620748814,1.06400514659507,0,0,5.92002116201184,0,0.538842688278752,0,0,0,0.234321431833797,0.624320153660641,0,0.149448680551801,0,0.161872944368132,0,0,0,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0.85422955527427,0.423863802319124,0,0.515262646192195,0.515281080091258,0.37223371266318,0,0.194874010322397,0,0.184099797284599,0,0.355009592516614,0.906768884048762,0.339121184620975,1.35282597214308,0.272746120590835,0,0,0.132529768321485,0.69716365721711,1.65857688024593,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,1.1240175325762,0.100528972411631,1.11106134190236,0,0,0,0.695582429850461,0.117408694235822,7.65142173133691,4.62985512576611,4.18559134916116,0,0,0,0,0,0,0.839910640994298,0.708875486211932,2.14940454486836,0.581267877027924,1.15014803749563,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23179289394444,0,0,0.26593811658487,2.08014873822732,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0.899756920638513,0,0,0,0.479249710983165,2.29723871668228,0,0,0,0,0,0,0,0,0.76228387266739,3.90419561572865,0.773288812777695,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0,0.902838299183157,4.5481500811197,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,1.48864684691266,0.767309866440312,0.280660094433074,1.40953064181271,0,0.804269605718038,1.48418066444991,0,0,0.0821271560138091,1.55776328755086,0,0,0,4.69613043573071,0.918515585316854,0.364182336013434,1.44236856455367,4.06079651616671,3.69673618101191,0,0,3.37765212457202,2.27466768141793,1.36074964221213,0.215915916102139,3.08454505380579,0.270946437543853,0,0,0,0,0,0,4.10320200186223,0.328014645699706,6.50756789328606,0.412164046590889,1.09883357782012,1.32015199872941,0,0,0,0.870036464629098,0,0,0,0.214840489736547,0.290033387828457,0,0.267096106940212,1.98341898433174,0.384380134730212,0.382838137483752,2.2254711788221,0.464845549297286,0,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0.855877976067841,0,0,0.359744915166629,0.274537029736055,0.589062011728432,0.202182481573316,0,0,0,0,0,0.545999645631943,0.848432591722276,0,0,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0.281695602532241,0.717056761020258,0,0,0.354761064070598,0,0,0,0,0.673554789078584,0.670302275535787,0,0.188287601553558,1.29151611801369,1.68471475667626,0.886860307073351,2.06751060186264,0,0,0,0,0,0,0,0,0.427296284509893,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,12.6602474769461,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0.311039587661807,0.179736702294654,0.179021174675609,0,1.7755813014648,0,0,0,2.41197055220813,0,0.520855522170466,0.699679999969566,0,0.455173793141999,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0.886642856860642,1.09692698576986,0,21.1924091303477,0.0769502585037971,0,0,0,0,0,0.457987967009312,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,1.83309043480088,0,0,0,0.134802265961354,0,0,0,0.978323094660449,0,0,0,0,0,3.30711522711884,1.34794648816421,0,0,0,0,0,0,0.347119476670262,1.66587075604442,0.783532859223623,0.52418000472609,10.4911479807686,0,0,0,1.16386819786103,0,0.451961481561065,0,0,0.886351143382302,0.977756913674015,0,0.426905989478705,0.39961921916426,1.72908500584927,0,0.686379991447858,0,0,0.707082103850386,0.407712618220842,0.523014231561666,0,3.17845648891671,0,0,0,0,0,21.7840272992358,9.16641696046735,0.717873024576814,8.18683902045863,34.3380838509257,7.81100101046554,9.87597045554876,0,0,0,0.0824158583811665,0.0674035438541849,0,0,2.38568906942791,0.817220436669454,0.160753148465019,0.137539436597234,0.415440338029185,0.674921674654501,1.5476039091159,1.70098758642469,1.0063040627978,0,0.314727528809989,0,0,0.575745591958336,20.7261644648276,3.97255182219259,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0.704815022316672,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,6.38341257770182,0,0,0,0,2.66991963625398,0.886068179966986,2.92863035764712,2.8793914062495,0.573409195690071,0.110929051536852,0,0,0.124980407962107,0.151649117541648,0.570930667089935,5.88164549245429,0,0.144921028610825,0.298509605773748,0,0.554805861502613,1.32582103692562,0.50313580350515,0,1.83072054717539,0.151230923763239,0.621748802331122,0,0.159296767163702,0,0.310525913752519,0.829412415681711,3.19010057469594,0.521745061811734,2.55437935295271,0.761610424337591,0.813741466409323,0.181848659202559,2.90008504014719,0.928067519756987,0.796191777397232,0.400027764663154,0.686791410365586,0.336749488765919,0,0,2.57329909649911,1.56596575179127,0,0,0,0.537266523244462,0.926404341482917,0.877136198314828,1.76689145945881,0.192914038270915,0,0.256241518587947,1.0362910251936,0,2.90342715918635,0.194860308839388,0,0.327130788511688,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0.699397538597222,1.24415452006595,1.15104934173287,2.26432103933032,0,0.327628914576042,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0.899209151350433,1.41696576325585,1.27707087245721,0.615349092722265,0,0.691572524642179,3.06803726700517,0,4.31849961404513,0.471878893390961,3.66857197043358,1.27078232765372,9.53455238667918,1.3807198521202,0.397832444232549,0.0752103283492573,0.20170506870352,0,0,0,1.6264169483875,0.472763092328763,0.781078098613847,2.06686796501184,0.570742291745161,1.09394961803644,0.548257766857182,1.48863353516788,23.9184892329084,0.383287282918786,1.07140367175657,0,0,0,0.354809480650555,0,0.342976018874837,0.135939465953663,0.789273282754189,0.118193840883968,0.111231401892069,0.470958557103084,0.314231179832004,0.840816489941367,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0.414432328326074,1.19502933965765,0.691259661814092,0.430227358820278,1.41998400876678,0.937347452350735,0,0.4582137370881,0,0,0,6.08531448414506,0.121917924982269,0.647428837187895,1.23195368227496,0,0.485710993059139,0,0.198950775161368,0,0.33883824611688,0.109940516745429,15.3982100438007,0,0.437119121007915,0,0,0.942706188406504,0.196308467114945,0,0,0,0,0.0644578879735772,0,0.892769693028288,0,0,0,0,0,0.473314686579554,1.56380427439104,0.872701380680755,0,0.371995018166751,0,0,0,0,0,1.52983244612973,1.06886962106224,6.61643276650883,0,0,0,0,0.103432995861895,1.0661699095049,0.714193294391221,0.0645889098360061,0.124149428591716,0.448527450322454,0.12729431655633,0.404234377916439,0.435433495793923,1.36893320434112,0.471464371102113,0.215166616178029,0.99798106963804,2.52350132694021,0,0,0.0898252021065869,9.38563769613817,0.244482888365733,0,0,0.603821380773079,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.845726424575827,0,0,0,0,0,0,0,0,0,0.263766978228454,0.74259811776028,0.331397375727916,2.01697543935533,1.20538905604795,1.46062018077475,0,0.246242116153576,0,0.626909442956176,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0,0.175669571386252,0.327447688744282,1.09288586487763,0.741568885568859,0,0,0,0,0,0,0.993812036833525,0.860234595106124,1.38856200643038,0,2.09749718104953,2.75118041940067,1.67195973229448,1.29208379584664,0.35576626268671,0.33472061276467,10.0707329277287,1.52054421143703,10.9827925896676,0,4.0507097394088,0.17859945656816,0.22452937262617,0.675668882899933,0,1.89853131913626,0.732806975721629,0,0,0,0.993943903390637,0.759783069987479,0.397227542439656,0.286836620748814,1.06400514659507,0,0,5.92002116201184,0,0.538842688278752,0,0,0,0.234321431833797,0.624320153660641,0,0.149448680551801,0,0.161872944368132,0,0,0,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0.85422955527427,0.423863802319124,0,0.515262646192195,0.515281080091258,0.37223371266318,0,0.194874010322397,0,0.184099797284599,0,0.355009592516614,0.906768884048762,0.339121184620975,1.35282597214308,0.272746120590835,0,0,0.132529768321485,0.69716365721711,1.65857688024593,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,1.1240175325762,0.100528972411631,1.11106134190236,0,0,0,0.695582429850461,0.117408694235822,7.65142173133691,4.62985512576611,4.18559134916116,0,0,0,0,0,0,0.839910640994298,0.708875486211932,2.14940454486836,0.581267877027924,1.15014803749563,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23179289394444,0,0,0.26593811658487,2.08014873822732,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0.899756920638513,0,0,0,0.479249710983165,2.29723871668228,0,0,0,0,0,0,0,0,0.76228387266739,3.90419561572865,0.773288812777695,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0,0.902838299183157,4.5481500811197,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,1.48864684691266,0.767309866440312,0.280660094433074,1.40953064181271,0,0.804269605718038,1.48418066444991,0,0,0.0821271560138091,1.55776328755086,0,0,0,4.69613043573071,0.918515585316854,0.364182336013434,1.44236856455367,4.06079651616671,3.69673618101191,0,0,3.37765212457202,2.27466768141793,1.36074964221213,0.215915916102139,3.08454505380579,0.270946437543853,0,0,0,0,0,0,4.10320200186223,0.328014645699706,6.50756789328606,0.412164046590889,1.09883357782012,1.32015199872941,0,0,0,0.870036464629098,0,0,0,0.214840489736547,0.290033387828457,0,0.267096106940212,1.98341898433174,0.384380134730212,0.382838137483752,2.2254711788221,0.464845549297286,0,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0.855877976067841,0,0,0.359744915166629,0.274537029736055,0.589062011728432,0.202182481573316,0,0,0,0,0,0.545999645631943,0.848432591722276,0,0,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0.281695602532241,0.717056761020258,0,0,0.354761064070598,0,0,0,0,0.673554789078584,0.670302275535787,0,0.188287601553558,1.29151611801369,1.68471475667626,0.886860307073351,2.06751060186264,0,0,0,0,0,0,0,0,0.427296284509893,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,12.6602474769461,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0.311039587661807,0.179736702294654,0.179021174675609,0,1.7755813014648,0,0,0,2.41197055220813,0,0.520855522170466,0.699679999969566,0,0.455173793141999,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0.886642856860642,1.09692698576986,0,21.1924091303477,0.0769502585037971,0,0,0,0,0,0.457987967009312,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,1.83309043480088,0,0,0,0.134802265961354,0,0,0,0.978323094660449,0,0,0,0,0,3.30711522711884,1.34794648816421,0,0,0,0,0,0,0.347119476670262,1.66587075604442,0.783532859223623,0.52418000472609,10.4911479807686,0,0,0,1.16386819786103,0,0.451961481561065,0,0,0.886351143382302,0.977756913674015,0,0.426905989478705,0.39961921916426,1.72908500584927,0,0.686379991447858,0,0,0.707082103850386,0.407712618220842,0.523014231561666,0,3.17845648891671,0,0,0,0,0,21.7840272992358,9.16641696046735,0.717873024576814,8.18683902045863,34.3380838509257,7.81100101046554,9.87597045554876,0,0,0,0.0824158583811665,0.0674035438541849,0,0,2.38568906942791,0.817220436669454,0.160753148465019,0.137539436597234,0.415440338029185,0.674921674654501,1.5476039091159,1.70098758642469,1.0063040627978,0,0.314727528809989,0,0,0.575745591958336,20.7261644648276,3.97255182219259,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0.704815022316672,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,6.38341257770182,0,0,0,0,2.66991963625398,0.886068179966986,2.92863035764712,2.8793914062495,0.573409195690071,0.110929051536852,0,0,0.124980407962107,0.151649117541648,0.570930667089935,5.88164549245429,0,0.144921028610825,0.298509605773748,0,0.554805861502613,1.32582103692562,0.50313580350515,0,1.83072054717539,0.151230923763239,0.621748802331122,0,0.159296767163702,0,0.310525913752519,0.829412415681711,3.19010057469594,0.521745061811734,2.55437935295271,0.761610424337591,0.813741466409323,0.181848659202559,2.90008504014719,0.928067519756987,0.796191777397232,0.400027764663154,0.686791410365586,0.336749488765919,0,0,2.57329909649911,1.56596575179127,0,0,0,0.537266523244462,0.926404341482917,0.877136198314828,1.76689145945881,0.192914038270915,0,0.256241518587947,1.0362910251936,0,2.90342715918635,0.194860308839388,0,0.327130788511688,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0.699397538597222,1.24415452006595,1.15104934173287,2.26432103933032,0,0.327628914576042,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0.899209151350433,1.41696576325585,1.27707087245721,0.615349092722265,0,0.691572524642179,3.06803726700517,0,4.31849961404513,0.471878893390961,3.66857197043358,1.27078232765372,9.53455238667918,1.3807198521202,0.397832444232549,0.0752103283492573,0.20170506870352,0,0,0,1.6264169483875,0.472763092328763,0.781078098613847,2.06686796501184,0.570742291745161,1.09394961803644,0.548257766857182,1.48863353516788,23.9184892329084,0.383287282918786,1.07140367175657,0,0,0,0.354809480650555,0,0.342976018874837,0.135939465953663,0.789273282754189,0.118193840883968,0.111231401892069,0.470958557103084,0.314231179832004,0.840816489941367,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0.414432328326074,1.19502933965765,0.691259661814092,0.430227358820278,1.41998400876678,0.937347452350735,0,0.4582137370881,0,0,0,6.08531448414506,0.121917924982269,0.647428837187895,1.23195368227496,0,0.485710993059139,0,0.198950775161368,0,0.33883824611688,0.109940516745429,15.3982100438007,0,0.437119121007915,0,0,0.942706188406504,0.196308467114945,0,0,0,0,0.0644578879735772,0,0.892769693028288,0,0,0,0,0,0.473314686579554,1.56380427439104,0.872701380680755,0,0.371995018166751,0,0,0,0,0,1.52983244612973,1.06886962106224,6.61643276650883,0,0,0,0,0.103432995861895,1.0661699095049,0.714193294391221,0.0645889098360061,0.124149428591716,0.448527450322454,0.12729431655633,0.404234377916439,0.435433495793923,1.36893320434112,0.471464371102113,0.215166616178029,0.99798106963804,2.52350132694021,0,0,0.0898252021065869,9.38563769613817,0.244482888365733,0,0,0.603821380773079,0 | ||
|short_description=p2@LOC728978 | |short_description=p2@LOC728978 | ||
}} | }} |
Latest revision as of 03:11, 19 September 2015
Short description: | p2@LOC728978 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC728978_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_038453_5end |
EntrezGene: | LOC728978 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.00e-09 | 24 |
endothelial cell | 1.19e-08 | 36 |
squamous epithelial cell | 3.81e-07 | 63 |
meso-epithelial cell | 4.26e-07 | 45 |
lining cell | 9.33e-07 | 58 |
barrier cell | 9.33e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
compound organ | 3.98e-07 | 68 |