FFCP PHASE1:Hg19::chr10:73472406..73472425,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100653137,64072 | |EntrezGene=100653137,64072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13733 | |HGNC=13733 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERT0,Q8N1Z7 | |UniProt=E7ERT0,Q8N1Z7 | ||
|association_with_transcript=45bp_to_ENST00000398792,ENST00000493280,uc001jsc.1_5end | |||
|cluster_id=chr10:73472406..73472425,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_2_at_CDH23_5end | |||
|id=chr10:73472406..73472425,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.87e-39!140;CL:0002087!7.60e-36!119;CL:0000037!9.46e-33!172;CL:0000566!9.46e-33!172;CL:0000988!3.29e-30!182;CL:0002057!4.16e-30!42;CL:0000860!1.18e-27!45;CL:0002031!3.89e-27!124;CL:0002032!8.54e-27!165;CL:0000837!8.54e-27!165;CL:0000766!3.05e-23!76;CL:0002194!4.22e-21!63;CL:0000576!4.22e-21!63;CL:0000040!4.22e-21!63;CL:0000559!4.22e-21!63;CL:0002009!3.00e-20!65;CL:0002393!2.37e-18!9;CL:0002397!2.37e-18!9;CL:0000839!2.47e-18!70;CL:0000557!5.55e-18!71;CL:0000791!3.19e-17!18;CL:0000789!3.19e-17!18;CL:0002420!3.19e-17!18;CL:0002419!3.19e-17!18;CL:0000790!3.19e-17!18;CL:0000625!7.28e-16!11;CL:0000763!9.71e-16!112;CL:0000049!9.71e-16!112;CL:0000084!5.77e-14!25;CL:0000827!5.77e-14!25;CL:0000542!1.05e-10!53;CL:0000051!1.05e-10!53;CL:0000838!1.15e-09!52;CL:0000784!1.33e-09!3;CL:0000875!4.66e-09!3;CL:0002396!4.66e-09!3;CL:0000134!6.35e-09!358;CL:0000842!6.64e-09!3;CL:0002320!1.63e-08!365;CL:0000219!4.31e-07!390;CL:0000224!9.17e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000784;7.19e-23;3!CL:0000791;5.90e-15;18!CL:0000789;5.90e-15;18!CL:0002419;5.90e-15;18!CL:0000625;4.22e-14;11!CL:0000084;7.30e-11;25!CL:0000771;9.46e-10;2!CL:0000815;1.44e-09;2!CL:0000792;1.44e-09;2!CL:0002677;1.44e-09;2!CL:0000451;6.35e-07;10!CL:0000898;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,7.20e-23,3;CL:0000791,7.08e-15,18;CL:0000789,7.08e-15,18;CL:0002420,7.08e-15,18;CL:0002419,7.08e-15,18;CL:0000790,7.08e-15,18;CL:0000625,5.29e-14,11;CL:0000084,8.31e-11,25;CL:0000827,8.31e-11,25;CL:0000771,9.46e-10,2;CL:0000815,1.44e-09,2;CL:0000792,1.44e-09,2;CL:0002677,1.44e-09,2;CL:0000738,4.24e-07,136;CL:0000451,6.35e-07,10;CL:0000898,8.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.90e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.63e-26!102;UBERON:0003061!2.63e-26!102;UBERON:0002193!4.33e-23!112;UBERON:0002371!3.17e-15!80;UBERON:0001474!1.03e-13!86;UBERON:0002405!8.72e-12!115;UBERON:0000178!8.19e-11!15;UBERON:0000179!8.19e-11!15;UBERON:0000463!8.19e-11!15;UBERON:0004765!9.71e-11!101;UBERON:0001434!9.71e-11!101;UBERON:0003081!2.87e-08!216;UBERON:0002384!5.82e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.11e-34;2!UBERON:0005058;1.11e-34;2!UBERON:0009113;1.11e-34;2!UBERON:0004177;1.61e-14;5!UBERON:0005057;1.61e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.79e-18,4;UBERON:0005058,6.79e-18,4;UBERON:0009113,6.79e-18,4;UBERON:0003295,6.79e-18,4;UBERON:0005562,6.79e-18,4;UBERON:0003351,2.91e-12,6;UBERON:0004177,1.21e-10,7;UBERON:0005057,1.21e-10,7;UBERON:0000974,1.02e-07,10;UBERON:0003408,1.02e-07,10;UBERON:0001042,1.02e-07,10;UBERON:0009145,1.02e-07,10;UBERON:0006562,4.30e-07,11;UBERON:0009722,4.30e-07,11;UBERON:0007690,4.30e-07,11 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,1.29096936716765,0,0.188242339542605,0.272906150057846,0.674170453335254,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0,0.521482918420201,0.217188844705117,0,0.736555271975129,0,0.633765858935825,0.212604299965044,0.838634582033504,0,0.150176892841506,0,0.285012743741249,0.59675003159727,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0,0,1.30368906653436,1.4203434172042,1.94826728407911,0,0,0,0.270803863765016,0,0,0,0,0,0.444859689486181,0.535081656179426,0,0,0,0.34362744548263,0,0,0.651083453856419,0,0.301150238155546,0.639933055772092,1.24930726552346,0.710331756132051,0,1.41124720257313,1.06976078313403,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.714695326373367,0.822724546172388,0.648473311192717,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.626719583092093,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,8.13820263933677,13.8426612879763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0.320568492303233 | ||
|short_description=p2@CDH23 | |||
}} | }} |
Latest revision as of 03:26, 19 September 2015
Short description: | p2@CDH23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH23_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 45bp_to_ENST00000398792, ENST00000493280, uc001jsc.1_5end |
EntrezGene: | 100653137,64072 |
HGNC: | 13733 |
UniProt: | E7ERT0Q8N1Z7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 7.20e-23 | 3 |
mature alpha-beta T cell | 7.08e-15 | 18 |
alpha-beta T cell | 7.08e-15 | 18 |
immature T cell | 7.08e-15 | 18 |
mature T cell | 7.08e-15 | 18 |
immature alpha-beta T cell | 7.08e-15 | 18 |
CD8-positive, alpha-beta T cell | 5.29e-14 | 11 |
T cell | 8.31e-11 | 25 |
pro-T cell | 8.31e-11 | 25 |
eosinophil | 9.46e-10 | 2 |
regulatory T cell | 1.44e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.44e-09 | 2 |
naive regulatory T cell | 1.44e-09 | 2 |
leukocyte | 4.24e-07 | 136 |
dendritic cell | 6.35e-07 | 10 |
naive T cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.79e-18 | 4 |
hemolymphoid system gland | 6.79e-18 | 4 |
thymic region | 6.79e-18 | 4 |
pharyngeal gland | 6.79e-18 | 4 |
thymus primordium | 6.79e-18 | 4 |
pharyngeal epithelium | 2.91e-12 | 6 |
hemopoietic organ | 1.21e-10 | 7 |
immune organ | 1.21e-10 | 7 |
neck | 1.02e-07 | 10 |
gland of gut | 1.02e-07 | 10 |
chordate pharynx | 1.02e-07 | 10 |
pharyngeal region of foregut | 1.02e-07 | 10 |
pharynx | 4.30e-07 | 11 |
entire pharyngeal arch endoderm | 4.30e-07 | 11 |
early pharyngeal endoderm | 4.30e-07 | 11 |