FFCP PHASE1:Hg19::chr17:25936882..25936893,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8844 | |EntrezGene=8844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6465 | |HGNC=6465 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_uc002gzn.2_5end | |association_with_transcript=-46bp_to_uc002gzn.2_5end | ||
|cluster_id=chr17:25936882..25936893,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_14_at_KSR1_5end | |description=CAGE_peak_14_at_KSR1_5end | ||
|id=chr17:25936882..25936893,+ | |id=chr17:25936882..25936893,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!1.73e-68!20;UBERON:0001869!8.40e-65!32;UBERON:0002619!2.33e-62!22;UBERON:0001893!5.89e-61!34;UBERON:0002791!3.52e-55!33;UBERON:0000956!6.23e-55!25;UBERON:0000203!6.23e-55!25;UBERON:0002020!1.55e-53!34;UBERON:0003528!1.55e-53!34;UBERON:0000200!2.42e-51!6;UBERON:0002780!2.24e-50!41;UBERON:0001890!2.24e-50!41;UBERON:0006240!2.24e-50!41;UBERON:0003080!3.80e-49!42;UBERON:0000955!3.36e-41!69;UBERON:0006238!3.36e-41!69;UBERON:0001049!1.89e-40!57;UBERON:0005068!1.89e-40!57;UBERON:0006241!1.89e-40!57;UBERON:0007135!1.89e-40!57;UBERON:0002616!5.20e-39!59;UBERON:0001017!2.28e-34!82;UBERON:0003056!2.71e-33!61;UBERON:0005743!1.14e-32!86;UBERON:0000073!2.32e-29!94;UBERON:0001016!2.32e-29!94;UBERON:0001872!1.25e-28!5;UBERON:0007023!3.88e-27!115;UBERON:0002771!2.93e-26!3;UBERON:0003075!4.79e-26!86;UBERON:0007284!4.79e-26!86;UBERON:0002346!8.88e-25!90;UBERON:0000033!1.02e-24!123;UBERON:0000153!1.93e-23!129;UBERON:0007811!1.93e-23!129;UBERON:0001870!1.00e-18!2;UBERON:0001871!1.77e-17!7;UBERON:0004121!3.25e-15!169;UBERON:0000924!8.50e-15!173;UBERON:0006601!8.50e-15!173;UBERON:0000025!1.82e-11!194;UBERON:0002902!1.65e-10!1;UBERON:0009899!1.65e-10!1;UBERON:0002022!2.37e-10!1;UBERON:0002581!2.59e-10!1;UBERON:0002702!2.84e-10!1;UBERON:0003112!6.33e-10!1;UBERON:0000032!6.33e-10!1;UBERON:0005253!6.33e-10!1;UBERON:0003128!6.33e-10!1;UBERON:0002241!6.33e-10!1;UBERON:0001703!6.33e-10!1;UBERON:0004761!6.33e-10!1;UBERON:0009617!6.33e-10!1;UBERON:0007190!7.55e-10!1;UBERON:0001882!9.82e-10!1;UBERON:0005403!9.82e-10!1;UBERON:0000369!2.54e-09!4;UBERON:0002435!2.54e-09!4;UBERON:0000204!2.54e-09!4;UBERON:0010082!2.54e-09!4;UBERON:0004111!1.23e-08!241;UBERON:0000064!1.52e-08!219;UBERON:0002021!3.24e-08!5;UBERON:0000475!3.97e-08!365;UBERON:0000477!8.47e-08!286 | |ontology_enrichment_uberon=UBERON:0001950!1.73e-68!20;UBERON:0001869!8.40e-65!32;UBERON:0002619!2.33e-62!22;UBERON:0001893!5.89e-61!34;UBERON:0002791!3.52e-55!33;UBERON:0000956!6.23e-55!25;UBERON:0000203!6.23e-55!25;UBERON:0002020!1.55e-53!34;UBERON:0003528!1.55e-53!34;UBERON:0000200!2.42e-51!6;UBERON:0002780!2.24e-50!41;UBERON:0001890!2.24e-50!41;UBERON:0006240!2.24e-50!41;UBERON:0003080!3.80e-49!42;UBERON:0000955!3.36e-41!69;UBERON:0006238!3.36e-41!69;UBERON:0001049!1.89e-40!57;UBERON:0005068!1.89e-40!57;UBERON:0006241!1.89e-40!57;UBERON:0007135!1.89e-40!57;UBERON:0002616!5.20e-39!59;UBERON:0001017!2.28e-34!82;UBERON:0003056!2.71e-33!61;UBERON:0005743!1.14e-32!86;UBERON:0000073!2.32e-29!94;UBERON:0001016!2.32e-29!94;UBERON:0001872!1.25e-28!5;UBERON:0007023!3.88e-27!115;UBERON:0002771!2.93e-26!3;UBERON:0003075!4.79e-26!86;UBERON:0007284!4.79e-26!86;UBERON:0002346!8.88e-25!90;UBERON:0000033!1.02e-24!123;UBERON:0000153!1.93e-23!129;UBERON:0007811!1.93e-23!129;UBERON:0001870!1.00e-18!2;UBERON:0001871!1.77e-17!7;UBERON:0004121!3.25e-15!169;UBERON:0000924!8.50e-15!173;UBERON:0006601!8.50e-15!173;UBERON:0000025!1.82e-11!194;UBERON:0002902!1.65e-10!1;UBERON:0009899!1.65e-10!1;UBERON:0002022!2.37e-10!1;UBERON:0002581!2.59e-10!1;UBERON:0002702!2.84e-10!1;UBERON:0003112!6.33e-10!1;UBERON:0000032!6.33e-10!1;UBERON:0005253!6.33e-10!1;UBERON:0003128!6.33e-10!1;UBERON:0002241!6.33e-10!1;UBERON:0001703!6.33e-10!1;UBERON:0004761!6.33e-10!1;UBERON:0009617!6.33e-10!1;UBERON:0007190!7.55e-10!1;UBERON:0001882!9.82e-10!1;UBERON:0005403!9.82e-10!1;UBERON:0000369!2.54e-09!4;UBERON:0002435!2.54e-09!4;UBERON:0000204!2.54e-09!4;UBERON:0010082!2.54e-09!4;UBERON:0004111!1.23e-08!241;UBERON:0000064!1.52e-08!219;UBERON:0002021!3.24e-08!5;UBERON:0000475!3.97e-08!365;UBERON:0000477!8.47e-08!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0002902;1.46e-50;1!UBERON:0009899;1.46e-50;1!UBERON:0002021;2.22e-40;5!UBERON:0001950;4.76e-22;20!UBERON:0002619;3.18e-20;22!UBERON:0000956;5.19e-18;25!UBERON:0000203;5.19e-18;25!UBERON:0001893;1.64e-12;34!UBERON:0002791;1.65e-12;32!UBERON:0001869;1.65e-12;32!UBERON:0003528;1.06e-11;34!UBERON:0002020;1.06e-11;34!UBERON:0001872;3.26e-11;5!UBERON:0001017;6.12e-09;75!UBERON:0002780;1.24e-07;41!UBERON:0001890;1.24e-07;41!UBERON:0000955;1.68e-07;68!UBERON:0000073;7.98e-07;53!UBERON:0002616;7.98e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,1.46e-50,1;UBERON:0009899,1.46e-50,1;UBERON:0002021,2.22e-40,5;UBERON:0001950,5.11e-22,20;UBERON:0002619,3.39e-20,22;UBERON:0000956,5.50e-18,25;UBERON:0000203,5.50e-18,25;UBERON:0002791,2.21e-14,32;UBERON:0001869,2.21e-14,32;UBERON:0003528,1.29e-13,34;UBERON:0002020,1.29e-13,34;UBERON:0001893,1.29e-13,34;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0002780,1.67e-11,41;UBERON:0001890,1.67e-11,41;UBERON:0003080,1.67e-11,41;UBERON:0006240,1.67e-11,41;UBERON:0001872,3.60e-11,5;UBERON:0001017,2.17e-10,81;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.82e-09,53;UBERON:0002616,3.82e-09,53;UBERON:0001049,1.04e-08,56;UBERON:0005068,1.04e-08,56;UBERON:0006241,1.04e-08,56;UBERON:0007135,1.04e-08,56;UBERON:0003056,4.50e-08,61;UBERON:0007023,8.86e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.500763722825999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.11743701340006,0,0,2.42050383624763,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,1.03343398250592,0.634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.920818829879887,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.500763722825999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.11743701340006,0,0,2.42050383624763,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,1.03343398250592,0.634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.920818829879887,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p14@KSR1 | |short_description=p14@KSR1 | ||
}} | }} |
Latest revision as of 04:08, 19 September 2015
Short description: | p14@KSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KSR1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -46bp_to_uc002gzn.2_5end |
EntrezGene: | KSR1 |
HGNC: | 6465 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital pole | 1.46e-50 | 1 |
pole of cerebral hemisphere | 1.46e-50 | 1 |
occipital lobe | 2.22e-40 | 5 |
neocortex | 5.11e-22 | 20 |
regional part of cerebral cortex | 3.39e-20 | 22 |
cerebral cortex | 5.50e-18 | 25 |
pallium | 5.50e-18 | 25 |
regional part of telencephalon | 2.21e-14 | 32 |
cerebral hemisphere | 2.21e-14 | 32 |
brain grey matter | 1.29e-13 | 34 |
gray matter | 1.29e-13 | 34 |
telencephalon | 1.29e-13 | 34 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
regional part of forebrain | 1.67e-11 | 41 |
forebrain | 1.67e-11 | 41 |
anterior neural tube | 1.67e-11 | 41 |
future forebrain | 1.67e-11 | 41 |
parietal lobe | 3.60e-11 | 5 |
central nervous system | 2.17e-10 | 81 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.82e-09 | 53 |
regional part of brain | 3.82e-09 | 53 |
neural tube | 1.04e-08 | 56 |
neural rod | 1.04e-08 | 56 |
future spinal cord | 1.04e-08 | 56 |
neural keel | 1.04e-08 | 56 |
pre-chordal neural plate | 4.50e-08 | 61 |
adult organism | 8.86e-08 | 114 |