FFCP PHASE1:Hg19::chr12:54379011..54379016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3226 | |EntrezGene=3226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5122 | |HGNC=5122 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYD6 | |UniProt=Q9NYD6 | ||
|association_with_transcript=41bp_to_ENST00000303460_5end | |||
|cluster_id=chr12:54379011..54379016,+ | |||
|coexpression_cluster_id=C321 | |||
|description=CAGE_peak_15_at_HOXC10_5end | |||
|id=chr12:54379011..54379016,+ | |||
|ontology_enrichment_celltype=CL:0000594!2.32e-10!3;CL:0000188!5.64e-09!9;CL:0000515!1.89e-08!4;CL:0002588!1.27e-07!2;CL:0002583!4.13e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000228;2.55e-98;1!CL:0002372;2.55e-98;1!CL:0000214;4.27e-34;3!CL:0000056;7.14e-26;4!CL:0000737;7.14e-26;4!CL:0000680;1.91e-15;7!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000188;2.45e-12;9!CL:0000327;5.55e-08;15!CL:0002321;5.93e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,2.55e-98,1;CL:0002372,2.55e-98,1;CL:0000214,4.27e-34,3;CL:0000737,7.14e-26,4;CL:0000515,7.14e-26,4;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000188,2.45e-12,9;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019=CL:0000515;7.14e-26;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.40e-08!27;UBERON:0003918!1.40e-08!27;UBERON:0005095!1.40e-08!27;UBERON:0007687!1.40e-08!27;UBERON:0003586!5.22e-07!5;UBERON:0000489!5.59e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;4.27e-34;3!UBERON:0007616;4.27e-34;3!UBERON:0002217;4.27e-34;3!UBERON:0002018;4.27e-34;3!UBERON:0004905;9.39e-14;8!UBERON:0000982;9.39e-14;8!UBERON:0004770;9.39e-14;8!UBERON:0004457;2.19e-12;9!UBERON:0000042;2.19e-12;9!UBERON:0000486;1.22e-09;12!UBERON:0001134;1.54e-07;16!UBERON:0002036;1.54e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.27e-34,3;UBERON:0007616,4.27e-34,3;UBERON:0002217,4.27e-34,3;UBERON:0002018,4.27e-34,3;UBERON:0004905,9.39e-14,8;UBERON:0000982,9.39e-14,8;UBERON:0004770,9.39e-14,8;UBERON:0004457,1.22e-09,12;UBERON:0000042,1.22e-09,12 | |||
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| ||
|short_description=p15@HOXC10 | |||
}} | }} |
Latest revision as of 04:30, 19 September 2015
Short description: | p15@HOXC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_HOXC10_5end |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | 41bp_to_ENST00000303460_5end |
EntrezGene: | HOXC10 |
HGNC: | 5122 |
UniProt: | Q9NYD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 2.55e-98 | 1 |
myotube | 2.55e-98 | 1 |
synovial cell | 4.27e-34 | 3 |
striated muscle cell | 7.14e-26 | 4 |
skeletal muscle myoblast | 7.14e-26 | 4 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
cell of skeletal muscle | 2.45e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 4.27e-34 | 3 |
layer of synovial tissue | 4.27e-34 | 3 |
synovial joint | 4.27e-34 | 3 |
synovial membrane of synovial joint | 4.27e-34 | 3 |
articulation | 9.39e-14 | 8 |
skeletal joint | 9.39e-14 | 8 |
articular system | 9.39e-14 | 8 |
cavity lining | 1.22e-09 | 12 |
serous membrane | 1.22e-09 | 12 |