FFCP PHASE1:Hg19::chr4:87857491..87857519,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7135 | |||
|TSSclassifier=strong | |||
|UniProt=D6RIZ5 | |||
|association_with_transcript=-42bp_to_ENST00000511442,uc003hqi.1_5end | |||
|cluster_id=chr4:87857491..87857519,+ | |||
|coexpression_cluster_id=C4438 | |||
|description=CAGE_peak_10_at_AFF1_5end | |||
|id=chr4:87857491..87857519,+ | |||
|ontology_enrichment_celltype=CL:0002032!9.83e-25!165;CL:0000837!9.83e-25!165;CL:0000037!1.13e-24!172;CL:0000566!1.13e-24!172;CL:0000988!2.02e-20!182;CL:0002031!2.27e-19!124;CL:0000763!1.69e-18!112;CL:0000049!1.69e-18!112;CL:0000738!1.20e-17!140;CL:0002087!3.66e-17!119;CL:0000557!5.13e-15!71;CL:0000839!2.10e-13!70;CL:0002009!3.28e-12!65;CL:0002194!2.57e-11!63;CL:0000576!2.57e-11!63;CL:0000040!2.57e-11!63;CL:0000559!2.57e-11!63;CL:0000766!5.89e-11!76;CL:0000860!1.99e-10!45;CL:0002057!4.02e-09!42;CL:0000945!1.39e-07!24;CL:0000826!1.39e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-11;33!CL:0002057;2.04e-11;33!CL:0000473;8.47e-08;39!CL:0000234;8.47e-08;39!CL:0000945;2.22e-07;24!CL:0000576;2.40e-07;48!CL:0000763;3.98e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,8.25e-25,161;CL:0000837,8.25e-25,161;CL:0000037,5.02e-24,168;CL:0000988,4.74e-21,177;CL:0000763,2.19e-18,108;CL:0000049,2.19e-18,108;CL:0002031,1.73e-17,120;CL:0000738,7.82e-16,136;CL:0002087,1.18e-14,115;CL:0000557,1.07e-13,67;CL:0000839,3.62e-11,66;CL:0002009,2.45e-10,61;CL:0000766,1.21e-09,72;CL:0002194,2.70e-09,59;CL:0000576,2.70e-09,59;CL:0000040,2.70e-09,59;CL:0000559,2.70e-09,59;CL:0000860,4.74e-09,42;CL:0002057,4.74e-09,42;CL:0000945,1.42e-07,24;CL:0000826,1.42e-07,24;CL:0000473,2.08e-07,48;CL:0000234,2.08e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;2.74e-07;42 | |||
|ontology_enrichment_disease=DOID:14566!1.11e-12!239;DOID:162!1.48e-12!235;DOID:2531!7.25e-09!51;DOID:0060083!7.25e-09!51;DOID:8692!4.73e-08!31;DOID:305!5.38e-08!106;DOID:1240!1.04e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.08e-10;31!DOID:1240;7.22e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.50e-11,51;DOID:0060083,4.50e-11,51;DOID:8692,9.16e-11,31;DOID:1240,2.71e-10,39;DOID:14566,8.17e-08,239;DOID:162,8.21e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.10e-11!80;UBERON:0002405!3.04e-11!115;UBERON:0002193!5.51e-11!112;UBERON:0001474!2.07e-10!86;UBERON:0002390!5.71e-10!102;UBERON:0003061!5.71e-10!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,7.59e-13,93;UBERON:0002371,9.65e-12,76;UBERON:0001474,2.89e-10,82;UBERON:0002193,9.43e-10,108;UBERON:0002390,1.06e-09,98;UBERON:0003061,1.06e-09,98;UBERON:0004765,5.13e-09,90;UBERON:0001434,9.51e-07,100 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.263766978228454,0,0,0,0,0.730310090387373,0,0.246242116153576,0,0,0,0,0,7.25927354605537,5.25443772479653,4.95877922276179,0.393364276848904,1.15148819429164,0.928896739896456,0,0.6024118375565,0,1.62681121218633,7.39280008934592,3.52320527201817,2.21598163412751,0.401088894940283,0.217010870715852,0.895661896959697,2.91504299417082,1.54545340580512,3.05336301437086,1.51150377475524,3.63876091781724,2.09186133215116,1.23350366406548,2.16794459626573,1.7261543539329,2.0492856522328,4.49316236788312,3.10271112662957,4.51839278508678,2.70852973188684,1.12945403725563,3.27487380069415,3.14612878223118,1.53041946185451,3.20929027076094,3.19668562899521,2.96866170168044,2.79249120670285,3.83602275479425,1.16083695451434,0,3.11411124497787,1.7587406567972,5.21482918420201,4.34377689410233,2.42159801053347,2.94622108790052,0.949387162322653,0.422510572623884,1.06302149982522,0.419317291016752,0.898629049171961,0.450530678524519,0.64290234678832,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,5.9742231159311,4.40435585739614,0.574752439954483,0.661044872784862,0.954053754535364,5.12291672198504,2.93618594685469,4.58727873750275,2.64342657158052,2.24203425192614,2.37045676297569,3.540775862049,2.75107533924415,0.616804496998528,1.5046784585161,1.62961133316795,2.36723902867367,1.94826728407911,2.1167986808183,1.17842362989935,1.55073726208535,4.06205795647523,1.79327847615945,1.1705341280389,0.822189523018381,0.276350017785848,0.289803085735052,0.889719378972363,1.33770414044857,0,0.679856056185397,0.766440987203842,1.37450978193052,1.01207876807801,0,0,0,1.20460095262218,0.895906278080929,0,0,0,3.42731463482045,1.06976078313403,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.982343066232845,1.09288586487763,0.370784442784429,1.29818957461873,3.30846500868608,1.59549552622638,0.715471872916026,0.571994910780128,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0,0.275118041940067,0.208994966536811,1.03366703667732,2.13459757612026,1.00416183829401,0,0,0.24406205754817,0,0,0.982297011124877,0.898117490504679,1.23872628531654,1.53316637465883,0,0.916008719652036,0,0,1.74437620857014,0,0.25326102332916,0.264818361626438,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0.312160076830321,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,1.82032272387605,0.718618141816238,0,0,0.277064115484183,0,0,0,0.226864366320042,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,2.12586938479627,1.36373060295417,0.860413786167011,3.17131635936948,4.10842281796604,4.76395165765025,3.83545903556871,3.5324919122588,0.72995471815166,0,0,0,0,0,0.354920400119532,1.01150814046861,1.20505514941741,0.661763836394364,0.871517776369625,0.949082476444386,1.75280700608214,1.37355025587742,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0.737930631258681,0.171567810298526,1.20725313949488,0,0.703702806881416,1.01847289674383,0,0,0,0,0,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0.246217006087397,0.702012795417713,0.743155811443641,0,1.51183915378974,1.13420077793909,0.626909658919938,0,0.383382679165211,12.3165809473986,1.14462964217194,8.70778085271243,12.2501960404417,5.55466707076072,0.063497894292169,0.381988425558278,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,2.1100756394171,2.61460037580088,2.89921674427965,0,1.50677127429638,0,0,0,0,0.289562613335158,0,0,0.336255431980582,3.34952292343276,1.94064817373566,1.41177339907723,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.35142424497814,0,0,0,0,0,0,0,0,2.48121631347465,0.862856803274467,0.74709290462411,0.303127571446259,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0.116210378459959,0.846016147141356,1.00253235151642,0.0920809889358963,0.34444334449382,0,0.393373244878272,0,1.46329140498388,1.56869953835371,0,2.32213583564327,1.13733384070897,0.170093705276516,0.431831832204279,0,0.270946437543853,0,1.01950509218015,2.49322802678617,0.223874754722178,0.438519753291869,0.522870902049801,0,0.328014645699706,0,6.07941968721561,0.54941678891006,1.07262349896764,1.14853107599234,0,0,0,0.154048617114644,0,0,0.429680979473094,0,0.0852266274161009,0.356128142586949,0.826424576804891,0.384380134730212,5.99779748724545,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0.379473173765715,0,0.48111056362756,1.34060455107157,1.08890984861323,6.49592225359776,0.43050537267123,1.68471475667626,1.33029046061003,1.37834040124176,0,0.764637207142375,0,1.42939065274673,0.822724546172388,0,0,0,0,0,1.22520107990516,2.78704762688578,4.76088402822268,1.13826949357463,0.318852545457645,2.99369057149225,0.383010740264733,4.23347165447766,0,1.68478306868075,4.10822422259746,1.09675927041116,0,2.03150133361924,9.79587258132567,4.84319297258514,11.0720021799485,3.09154810280188,3.99412993600995,5.81557880520281,3.67068111766199,1.17232857241224,0.278406173895242,1.23087398947712,1.6227340708559,0,2.81974010175699,0.37428108081644,3.95572084034114,0,2.11742430127209,0.568272293612826,5.01363417949149,0.593929361665277,2.15012491469462,0,0.281338832821026,1.33570446027487,0.16480387422676,0,0.597743964753209,2.48655523978033,0,0.102268682502155,8.36976677135272,0,1.97710372524119,3.9384658428634,1.02314474045374,2.26879832964947,0,0,0,0,0,0.260427761085233,1.39935999993913,0.724999575434793,0.227586896570999,4.32231205497703,1.18193840883968,0,0.583209226766509,0,0,0.241192877250816,0,0.221158519862449,0,0.219385397153973,1.41620002574687,0,3.92446318369365,0.797594390929008,0.23056390438806,2.33369875465408,1.08647371922008,12.4410452295449,0.915975934018623,10.6606955203727,0,0.156980256395025,6.31604391220594,1.35357396370308,2.54881294613061,2.51732380463764,3.41556718903533,10.0130044757639,1.89898258075224,4.57051862845614,0.565412285735763,0.649165919226273,0.995261931078505,3.27292988662355,2.4441205797345,0,0,0,0.337005664903385,0.802577647298789,0,14.5963831372533,0.978323094660449,0.485560759068186,1.57833761139756,0,0,1.45329133145522,2.40517471063188,3.21433393331466,0,0,0.313932918407225,0,2.27687636823834,0.138674673013139,0,3.33174151208884,1.13176968554523,0.17472666824203,0.51595809741485,3.57998425769615,4.01991243974021,2.95615645391553,1.16386819786103,0,0.451961481561065,0.548167698587004,0.19871461170299,0.0633107959558787,0.586654148204409,1.84365286578528,1.28071796843612,1.39866726707491,0.288180834308212,0.114536596165916,0.343189995723929,0.864328787928898,2.85780831800495,0,0.815425236441684,0.941425616810999,0.101998217636322,0.288950589901519,0,0.547621515567972,5.10986352267889,0.429765441419957,0,0.558564802544508,0.687481272035051,0.717873024576814,0,0.429226048136571,0,0.53746777989381,0,1.16495949527454,0.787831823072237,0.494495150286999,1.14586024552114,1.67326718575073,1.1007533168552,0,0.272406812223151,3.05430982083536,3.71356478812531,2.07720169014593,2.92466059016951,8.51182150013745,0.0607495566580247,0.335434687599266,3.38864541386552,2.20309270166992,1.16160370171347,0,0.191915197319445,0,0,0,1.62899880526114,1.72844298240254,0.979762080328227,1.19730191562487,3.3657933507229,0.340776043570843,0.453248366080503,0.58620893471233,0,0.387848869084652,0.13223260174269,2.05304205461195,5.63852017853338,2.66968531419237,0.943225830597996,0.828478110694391,0.992332043623902,8.89252343540749,1.82688897571344,8.93677760878255,1.08803560673895,2.506898940227,3.36980134439808,1.96723578425883,2.35581144375351,0,0.122026264901963,0.3755727921195,0.573409195690071,0.110929051536852,0.248385611765534,0.276697269872462,0.249960815924213,0,0.285465333544967,0.705797459094515,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.318593534327405,4.49803112163605,0.155262956876259,0.414706207840855,0,2.08698024724694,0.450772826991655,5.71207818253193,0.406870733204662,0.363697318405119,0.751873899297419,1.39210127963548,1.19428766609585,0,0,0,0,0.192619830407303,6.6476893326227,0,0.680117776536817,0.231522474323834,0.489473409012935,0.537266523244462,0.308801447160972,1.09642024789354,0.883445729729405,6.17324922466927,1.52048196587765,2.81865670446741,1.38172136692479,1.21543982470953,0,2.72804432375144,2.65729680626726,0.490696182767533,0,1.72041036127604,0.211312123358627,0.39997479170986,4.16097745807149,1.37771983728653,0,0,0,0,0,0,2.51625506969434,0,1.01839517972415,1.48802444071178,1.48722917110803,0.558644917973244,0,1.1829261750188,0,0,0.3062454773532,0,0,0.319267718114302,0,0,0,0,0,2.94443155503077,0.471878893390961,0.917142992608395,0.693153996902029,0.762764190934334,0.690359926060101,0,0.676892955143315,0.20170506870352,0.781514011233092,0,1.31017534008077,3.69640215542613,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,1.98484471355718,4.22090986463089,0.511049710558381,0.535701835878287,0.336283722218824,0,0,14.1036768558596,0.921871900446234,1.37190407549935,0,0.0657727735628491,0.590969204419841,1.11231401892069,3.9246546425257,0,2.80272163313789,1.82631744101899,4.53447941559105,9.07728206985395,0.214429632529969,0.316027223465453,0.23248285073625,0.173858272302579,0,1.65772931330429,0.17071847709395,1.38251932362818,1.29068207646083,0,0.0852134047591577,1.27016115057279,0.4582137370881,0.31020638566432,0,0.782988022584546,0.785201868921944,0.853425474875886,2.58971534875158,2.46390736454993,0,0,0,0.198950775161368,0,1.24240690242856,0.769583617218004,0,1.54348316215889,0.437119121007915,2.82190377816914,0.490296643507811,1.17838273550813,0.196308467114945,0,0.4226557275834,0,1.87967835959707,1.80482086326016,4.4973520166218,0.357107877211315,0.705789743431384,2.40724100067505,0.730336388246517,1.83491713361816,0.143339583151451,0,0,0,1.5870805215462,0.371995018166751,0,0,3.53265989538221,3.49649830283826,0.633492505057185,4.07955318967927,14.4297398843403,7.35159196278759,17.5495277504663,0.757786982182394,0,0,0.310298987585686,0.213233981900981,0,1.29177819672012,4.2831552864142,0.448527450322454,0.381882949668989,0.202117188958219,0.653150243690884,0,3.30025059771479,2.79716601031438,0.665320713092027,1.54666210360852,2.13454691755431,0,1.07790242527904,0,3.54500188130313,0,0.665756774185513,0.805095174364105,5.44966436915496 | |||
|short_description=p10@AFF1 | |||
}} |
Latest revision as of 04:38, 19 September 2015
Short description: | p10@AFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_AFF1_5end |
Coexpression cluster: | C4438_Mast_placenta_chorionic_mesenchymal_chronic_testicular_mesothelioma |
Association with transcript: | -42bp_to_ENST00000511442, uc003hqi.1_5end |
EntrezGene: | AFF1 |
HGNC: | 7135 |
UniProt: | D6RIZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 8.25e-25 | 161 |
hematopoietic multipotent progenitor cell | 8.25e-25 | 161 |
hematopoietic stem cell | 5.02e-24 | 168 |
hematopoietic cell | 4.74e-21 | 177 |
myeloid cell | 2.19e-18 | 108 |
common myeloid progenitor | 2.19e-18 | 108 |
hematopoietic lineage restricted progenitor cell | 1.73e-17 | 120 |
leukocyte | 7.82e-16 | 136 |
nongranular leukocyte | 1.18e-14 | 115 |
granulocyte monocyte progenitor cell | 1.07e-13 | 67 |
myeloid lineage restricted progenitor cell | 3.62e-11 | 66 |
macrophage dendritic cell progenitor | 2.45e-10 | 61 |
myeloid leukocyte | 1.21e-09 | 72 |
monopoietic cell | 2.70e-09 | 59 |
monocyte | 2.70e-09 | 59 |
monoblast | 2.70e-09 | 59 |
promonocyte | 2.70e-09 | 59 |
classical monocyte | 4.74e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.74e-09 | 42 |
lymphocyte of B lineage | 1.42e-07 | 24 |
pro-B cell | 1.42e-07 | 24 |
defensive cell | 2.08e-07 | 48 |
phagocyte | 2.08e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
immune system | 7.59e-13 | 93 |
bone marrow | 9.65e-12 | 76 |
bone element | 2.89e-10 | 82 |
hemolymphoid system | 9.43e-10 | 108 |
hematopoietic system | 1.06e-09 | 98 |
blood island | 1.06e-09 | 98 |
skeletal element | 5.13e-09 | 90 |
skeletal system | 9.51e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.50e-11 | 51 |
immune system cancer | 4.50e-11 | 51 |
myeloid leukemia | 9.16e-11 | 31 |
leukemia | 2.71e-10 | 39 |
disease of cellular proliferation | 8.17e-08 | 239 |
cancer | 8.21e-08 | 235 |