FFCP PHASE1:Hg19::chrX:119694573..119694611,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8450 | |EntrezGene=8450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2555 | |HGNC=2555 | ||
|TSSclassifier=strong | |||
|UniProt=Q13620 | |UniProt=Q13620 | ||
|association_with_transcript=-18bp_to_ENST00000371322_5end | |association_with_transcript=-18bp_to_ENST00000371322_5end | ||
|cluster_id=chrX:119694573..119694611,- | |||
|coexpression_cluster_id=C964 | |||
|description=CAGE_peak_2_at_CUL4B_5end | |description=CAGE_peak_2_at_CUL4B_5end | ||
|id=chrX:119694573..119694611,- | |id=chrX:119694573..119694611,- | ||
|ontology_enrichment_celltype=CL:0000055!2.04e-15!180;CL:0000222!4.21e-12!119;CL:0000057!3.59e-10!75;CL:0000213!1.35e-07!57;CL:0000215!1.35e-07!57;CL:0000077!2.03e-07!19 | |ontology_enrichment_celltype=CL:0000055!2.04e-15!180;CL:0000222!4.21e-12!119;CL:0000057!3.59e-10!75;CL:0000213!1.35e-07!57;CL:0000215!1.35e-07!57;CL:0000077!2.03e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.48e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.10e-12,121;CL:0000057,2.45e-10,76;CL:0000213,1.14e-07,58;CL:0000215,1.14e-07,58;CL:0000077,1.98e-07,19;CL:0000680,7.82e-07,58;CL:0000056,7.82e-07,58;CL:0000355,7.82e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.40e-16!365;UBERON:0000481!2.76e-14!347;UBERON:0000477!1.02e-12!286;UBERON:0000483!9.67e-11!309;UBERON:0000119!1.03e-10!312;UBERON:0004111!2.55e-10!241;UBERON:0000468!1.64e-09!659;UBERON:0000490!8.77e-09!138;UBERON:0002049!2.28e-08!79;UBERON:0007798!2.28e-08!79;UBERON:0002100!3.66e-08!216;UBERON:0000025!5.94e-08!194;UBERON:0002385!2.12e-07!63;UBERON:0001015!2.12e-07!63;UBERON:0000383!2.12e-07!63;UBERON:0000914!2.22e-07!83;UBERON:0002329!2.22e-07!83;UBERON:0003077!2.22e-07!83;UBERON:0003059!2.22e-07!83;UBERON:0007282!2.22e-07!83;UBERON:0009618!2.22e-07!83;UBERON:0007285!2.22e-07!83;UBERON:0004535!3.11e-07!110;UBERON:0001009!3.40e-07!113;UBERON:0001134!3.70e-07!61;UBERON:0002036!3.70e-07!61;UBERON:0003082!3.70e-07!61;UBERON:0000055!8.09e-07!69 | |ontology_enrichment_uberon=UBERON:0000475!7.40e-16!365;UBERON:0000481!2.76e-14!347;UBERON:0000477!1.02e-12!286;UBERON:0000483!9.67e-11!309;UBERON:0000119!1.03e-10!312;UBERON:0004111!2.55e-10!241;UBERON:0000468!1.64e-09!659;UBERON:0000490!8.77e-09!138;UBERON:0002049!2.28e-08!79;UBERON:0007798!2.28e-08!79;UBERON:0002100!3.66e-08!216;UBERON:0000025!5.94e-08!194;UBERON:0002385!2.12e-07!63;UBERON:0001015!2.12e-07!63;UBERON:0000383!2.12e-07!63;UBERON:0000914!2.22e-07!83;UBERON:0002329!2.22e-07!83;UBERON:0003077!2.22e-07!83;UBERON:0003059!2.22e-07!83;UBERON:0007282!2.22e-07!83;UBERON:0009618!2.22e-07!83;UBERON:0007285!2.22e-07!83;UBERON:0004535!3.11e-07!110;UBERON:0001009!3.40e-07!113;UBERON:0001134!3.70e-07!61;UBERON:0002036!3.70e-07!61;UBERON:0003082!3.70e-07!61;UBERON:0000055!8.09e-07!69 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,3.33e-10,306;UBERON:0000119,3.55e-10,309;UBERON:0004111,5.58e-10,240;UBERON:0003104,1.64e-09,160;UBERON:0009142,1.64e-09,160;UBERON:0000490,1.99e-08,148;UBERON:0002049,3.08e-08,78;UBERON:0007798,3.08e-08,78;UBERON:0000025,1.38e-07,192;UBERON:0002385,1.55e-07,64;UBERON:0001015,1.55e-07,64;UBERON:0000383,1.55e-07,64;UBERON:0010314,2.70e-07,132;UBERON:0001134,2.71e-07,62;UBERON:0002036,2.71e-07,62;UBERON:0003082,2.71e-07,62;UBERON:0005256,3.42e-07,122;UBERON:0004535,4.61e-07,109;UBERON:0001009,5.03e-07,112;UBERON:0007524,9.14e-07,73;UBERON:0003077,9.98e-07,72;UBERON:0007285,9.98e-07,72 | |||
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| ||
|short_description=p2@CUL4B | |short_description=p2@CUL4B | ||
}} | }} |
Latest revision as of 06:33, 19 September 2015
Short description: | p2@CUL4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CUL4B_5end |
Coexpression cluster: | C964_Nucleus_Anulus_meningioma_large_Olfactory_Chondrocyte_Mesothelial |
Association with transcript: | -18bp_to_ENST00000371322_5end |
EntrezGene: | CUL4B |
HGNC: | 2555 |
UniProt: | Q13620 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.10e-12 | 121 |
fibroblast | 2.45e-10 | 76 |
lining cell | 1.14e-07 | 58 |
barrier cell | 1.14e-07 | 58 |
mesothelial cell | 1.98e-07 | 19 |
muscle precursor cell | 7.82e-07 | 58 |
myoblast | 7.82e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.82e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelium | 3.33e-10 | 306 |
cell layer | 3.55e-10 | 309 |
anatomical conduit | 5.58e-10 | 240 |
mesenchyme | 1.64e-09 | 160 |
entire embryonic mesenchyme | 1.64e-09 | 160 |
unilaminar epithelium | 1.99e-08 | 148 |
vasculature | 3.08e-08 | 78 |
vascular system | 3.08e-08 | 78 |
tube | 1.38e-07 | 192 |
muscle tissue | 1.55e-07 | 64 |
musculature | 1.55e-07 | 64 |
musculature of body | 1.55e-07 | 64 |
structure with developmental contribution from neural crest | 2.70e-07 | 132 |
skeletal muscle tissue | 2.71e-07 | 62 |
striated muscle tissue | 2.71e-07 | 62 |
myotome | 2.71e-07 | 62 |
trunk mesenchyme | 3.42e-07 | 122 |
cardiovascular system | 4.61e-07 | 109 |
circulatory system | 5.03e-07 | 112 |
dense mesenchyme tissue | 9.14e-07 | 73 |
paraxial mesoderm | 9.98e-07 | 72 |
presumptive paraxial mesoderm | 9.98e-07 | 72 |