FFCP PHASE1:Hg19::chr19:50168861..50168873,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:50168861..50168873,-
|short_description=p3@IRF3
|description=CAGE_peak_3_at_IRF3_5end
|association_with_transcript=240bp_to_uc002pox.1,uc002poy.1,uc002poz...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3661 | |EntrezGene=3661 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6118 | |HGNC=6118 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=240bp_to_uc002pox.1,uc002poy.1,uc002poz.1,uc010end.1_5end | |||
|cluster_id=chr19:50168861..50168873,- | |||
|description=CAGE_peak_3_at_IRF3_5end | |||
|id=chr19:50168861..50168873,- | |||
|ontology_enrichment_celltype=CL:0000542!2.15e-12!53;CL:0000051!2.15e-12!53;CL:0000838!3.02e-12!52;CL:0000037!1.18e-08!172;CL:0000566!1.18e-08!172;CL:0002032!5.79e-08!165;CL:0000837!5.79e-08!165;CL:0000988!3.25e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.23e-08;53!CL:0000084;1.28e-07;25!CL:0000791;3.83e-07;18!CL:0000789;3.83e-07;18!CL:0002419;3.83e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.06e-14,53;CL:0000051,2.06e-14,53;CL:0000838,3.29e-14,52;CL:0000037,3.34e-11,168;CL:0002032,3.43e-10,161;CL:0000837,3.43e-10,161;CL:0000988,9.51e-10,177;CL:0000738,5.43e-08,136;CL:0000084,7.15e-08,25;CL:0000827,7.15e-08,25;CL:0000791,1.39e-07,18;CL:0000789,1.39e-07,18;CL:0002420,1.39e-07,18;CL:0002419,1.39e-07,18;CL:0000790,1.39e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;2.23e-08;53!CL:0000790;3.83e-07;18 | |||
|ontology_enrichment_disease=DOID:0050686!9.14e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.07e-07,51;DOID:0060083,3.07e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.68e-07!15;UBERON:0000179!3.68e-07!15;UBERON:0000463!3.68e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.50e-07;15!UBERON:0000179;1.50e-07;15!UBERON:0000463;1.50e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.75e-08,15;UBERON:0000179,4.75e-08,15;UBERON:0000463,4.75e-08,15 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.422863212287913,0,0.446961094427288,0,0,0,0,0.491467873003018,2.09340350391728,1.09220686065086,1.31883489114227,0.247532705920093,0.662794751455832,0,0,0,0,0.246242116153576,0,0,0.572471974262113,0.136874425072884,0.125542639594803,1.98674854944673,1.64201178899891,2.44003422072406,3.54027849164014,1.53531759238885,0.309632246632152,0.919421224478927,1.8072355126695,2.9580320813343,2.63388481973026,1.27952309238679,0.587200878669695,2.21598163412751,2.20598892217156,1.51907609501096,0.671746422719773,0.971680998056939,1.03030227053675,0.436194716338694,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0.845021145247767,0.637812899895131,0.419317291016752,0.22465726229299,0.300353785683013,0,1.14005097496499,0.59675003159727,1.27864907635244,0,2.18455444504853,0.889509253863555,3.41384178053206,0.400395987036012,2.29900975981793,2.64417949113945,0.954053754535364,3.41527781465669,1.76171156811282,1.52909291250092,0,0.560508562981536,2.10707267820062,4.13090517239049,3.93010762749165,6.99045096598331,2.84217042164153,0.977766799900771,0.946895611469467,1.94826728407911,2.33961959458865,1.47302953737419,3.1014745241707,3.5204502289452,2.5618263945135,2.60118695119756,1.64437904603676,0.829050053357545,1.44901542867526,1.92772532110679,0.802622484269139,3.1360657141493,1.92625882585863,1.14966148080576,1.71813722741315,4.30133476433155,1.59282707162048,1.95325036156926,0.950452044448374,2.86092726247768,3.19966527886046,0,3.31488152861624,4.10563998460523,2.62088766192152,4.81392352410313,1.73789284659359,0,0,0.511450247374121,0.361439152384566,0,0,0,0,0.283604451492204,0.443458794925128,0.351339142772504,0.982343066232845,3.27865759463288,2.22470665670658,3.24547393654683,3.30846500868608,3.32394901297163,2.8618874916641,0,1.48583000531826,0,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0.258416759169329,1.42306505074684,0.33472061276467,0.805658634218294,0,0.732186172644509,0,0.81014194788176,0.0892997282840798,0.898117490504679,0.563057402416611,0,0,0.183201743930407,0,0,1.3082821564276,0,0.379891534993739,0.397227542439656,1.14734648299525,0,0,0,0.24666754841716,0,0.942974704487816,0,0.302714855289863,0.576175924479999,0.70296429550139,0,0,0.448346041655403,0.469737994575059,0.323745888736263,0.421352420106746,0.204154171254893,0.368502951935304,0.309977343527296,0,0.247266929278557,1.82032272387605,0.718618141816238,0,0.500474079487857,0.277064115484183,0,0,0,0.453728732640084,0.538168907066586,0.85422955527427,0.423863802319124,1.20036438433761,0.103052529238439,0.257640540045629,0.37223371266318,0.843881661206331,0.194874010322397,1.7670364197088,0.276149695926898,0.80823028409406,0,0.302256294682921,0.169560592310488,1.54608682530637,0.818238361772504,0.860413786167011,0.609868530647977,0.662648841607426,0.464775771478074,0.518305275076852,0.252320850875628,0.72995471815166,0,1.92972281457866,0,0,0.721879481669586,0.591534000199219,0.842923450390509,0.241011029883482,0.772057809126758,0.653638332277218,1.18635309555548,2.02246962240247,0.784885860501384,1.53898862778556,0.738155454624648,1.40241773803446,0.4115740113314,0,2.53510069643662,0.982827216677626,1.18157981336281,2.20731549707325,0.737930631258681,0.514703430895577,1.31700342490351,0,1.10581869652794,0.370353780634118,0.651616610620649,0,0,0.34779121492523,0,0.144366447761074,0,0.570762456703795,2.37061319387782,1.71697232418975,1.23108503043699,0.468008530278475,1.33768046059855,0,1.00789276919316,1.70130116690864,2.14940454486836,0.581267877027924,1.53353071666084,3.94130590316755,2.0251139823042,1.65862492432618,11.9619561336078,3.53478813593864,0.444485260045183,0.381988425558278,0,0,0.925447434329912,1.20137223137567,0.857479297891735,0.112131084345361,0,0.07333828582095,0.904902010304444,0,0,0.26593811658487,1.04007436911366,0.257207374262142,1.41849132023278,0.266422179016099,0.428933980974443,1.08524321078289,0.823240336780769,0.325736184293735,0,0.791951872933429,0.301439377059586,0,1.19967589418468,0,0,2.10833939483032,0,0,2.85273810081437,0.289562613335158,1.64381058040307,0.179060963239896,2.69004345584465,3.54655368363469,3.23441362289276,3.46526197955321,0,0,0,0.335032530668698,0,0.749007023947182,2.99161459204025,0.414415513436035,0.49076596687656,0,0,1.03985430765404,0.713715955188647,0.630809660135739,0.117141414992713,0,0,0,0,0.368738337083406,0.347534457872331,0.195801157462741,0.686286847621712,2.89475236572042,1.72571360654893,1.81436848265855,1.5156378572313,4.99306318531491,0.604780586659361,0.992431231275107,0.460385919864187,0.280660094433074,0.384417447767103,1.02341449813341,0,1.48418066444991,0.154209693802656,0.355123450626254,0.328508624055237,0.519254429183621,0.464841513839837,2.1754700926492,0.601519410909855,1.381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| ||
|short_description=p3@IRF3 | |||
}} | }} |
Latest revision as of 08:35, 19 September 2015
Short description: | p3@IRF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IRF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 240bp_to_uc002pox.1, uc002poy.1, uc002poz.1, uc010end.1_5end |
EntrezGene: | IRF3 |
HGNC: | 6118 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.06e-14 | 53 |
common lymphoid progenitor | 2.06e-14 | 53 |
lymphoid lineage restricted progenitor cell | 3.29e-14 | 52 |
hematopoietic stem cell | 3.34e-11 | 168 |
hematopoietic oligopotent progenitor cell | 3.43e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.43e-10 | 161 |
hematopoietic cell | 9.51e-10 | 177 |
leukocyte | 5.43e-08 | 136 |
T cell | 7.15e-08 | 25 |
pro-T cell | 7.15e-08 | 25 |
mature alpha-beta T cell | 1.39e-07 | 18 |
alpha-beta T cell | 1.39e-07 | 18 |
immature T cell | 1.39e-07 | 18 |
mature T cell | 1.39e-07 | 18 |
immature alpha-beta T cell | 1.39e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
blood | 4.75e-08 | 15 |
haemolymphatic fluid | 4.75e-08 | 15 |
organism substance | 4.75e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.07e-07 | 51 |
immune system cancer | 3.07e-07 | 51 |