FFCP PHASE1:Hg19::chr15:80469741..80469772,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2184 | |EntrezGene=2184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3579 | |HGNC=3579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000559217_5end | |association_with_transcript=0bp_to_ENST00000559217_5end | ||
|cluster_id=chr15:80469741..80469772,+ | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_6_at_FAH_5end | |description=CAGE_peak_6_at_FAH_5end | ||
|id=chr15:80469741..80469772,+ | |id=chr15:80469741..80469772,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.21e-14!180;CL:0000359!1.97e-11!32;CL:0000192!2.06e-11!42;CL:0000514!2.06e-11!42;CL:0000680!8.77e-11!57;CL:0000056!8.77e-11!57;CL:0000355!8.77e-11!57;CL:0000222!4.22e-10!119;CL:0000048!4.29e-09!430;CL:0002551!4.57e-09!6;CL:0000723!5.79e-09!436;CL:0000187!6.94e-09!54;CL:0000034!2.52e-08!444;CL:0000183!2.94e-08!59;CL:0000057!5.22e-08!75;CL:0002595!1.18e-07!5;CL:0000393!2.56e-07!60;CL:0000211!2.56e-07!60;CL:0002552!4.29e-07!5;CL:0002371!6.80e-07!591 | |ontology_enrichment_celltype=CL:0000055!6.21e-14!180;CL:0000359!1.97e-11!32;CL:0000192!2.06e-11!42;CL:0000514!2.06e-11!42;CL:0000680!8.77e-11!57;CL:0000056!8.77e-11!57;CL:0000355!8.77e-11!57;CL:0000222!4.22e-10!119;CL:0000048!4.29e-09!430;CL:0002551!4.57e-09!6;CL:0000723!5.79e-09!436;CL:0000187!6.94e-09!54;CL:0000034!2.52e-08!444;CL:0000183!2.94e-08!59;CL:0000057!5.22e-08!75;CL:0002595!1.18e-07!5;CL:0000393!2.56e-07!60;CL:0000211!2.56e-07!60;CL:0002552!4.29e-07!5;CL:0002371!6.80e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.77e-17;6!CL:0000359;1.10e-12;32!CL:0002551;1.22e-11;6!CL:0002561;3.05e-09;2!CL:0000192;2.16e-08;43!CL:0002595;4.56e-08;5!CL:0002552;8.89e-08;5!CL:0000840;4.49e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.53e-17,6;CL:0000359,4.12e-13,32;CL:0002551,1.21e-11,6;CL:0000192,3.42e-09,43;CL:0000514,3.42e-09,43;CL:0002561,3.67e-09,2;CL:0002595,5.80e-08,5;CL:0002552,1.05e-07,5;CL:0000840,4.23e-07,5;CL:0001029,4.23e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;2.16e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!3.60e-15!42;UBERON:0003509!3.60e-15!42;UBERON:0004572!3.60e-15!42;UBERON:0000914!1.22e-13!83;UBERON:0002329!1.22e-13!83;UBERON:0003077!1.22e-13!83;UBERON:0003059!1.22e-13!83;UBERON:0007282!1.22e-13!83;UBERON:0009618!1.22e-13!83;UBERON:0007285!1.22e-13!83;UBERON:0004290!4.78e-13!70;UBERON:0000055!5.52e-13!69;UBERON:0001981!7.63e-13!60;UBERON:0007500!7.63e-13!60;UBERON:0004537!7.63e-13!60;UBERON:0006965!7.63e-13!60;UBERON:0004573!2.99e-12!33;UBERON:0004571!2.99e-12!33;UBERON:0000486!5.04e-12!82;UBERON:0004872!4.03e-11!84;UBERON:0002049!7.05e-11!79;UBERON:0007798!7.05e-11!79;UBERON:0002204!1.49e-09!167;UBERON:0001134!1.50e-09!61;UBERON:0002036!1.50e-09!61;UBERON:0003082!1.50e-09!61;UBERON:0002385!5.36e-09!63;UBERON:0001015!5.36e-09!63;UBERON:0000383!5.36e-09!63;UBERON:0004535!1.14e-08!110;UBERON:0001009!3.68e-08!113;UBERON:0003834!1.18e-07!5;UBERON:0001533!1.18e-07!5;UBERON:0002298!1.54e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.05e-12;33!UBERON:0004571;7.05e-12;33!UBERON:0005933;3.05e-09;2!UBERON:0005942;3.05e-09;2!UBERON:0005932;3.05e-09;2!UBERON:0001637;9.85e-09;42!UBERON:0003509;9.85e-09;42!UBERON:0004572;9.85e-09;42!UBERON:0003834;4.56e-08;5!UBERON:0001533;4.56e-08;5!UBERON:0002067;9.15e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.38e-12,33;UBERON:0004571,1.38e-12,33;UBERON:0001637,2.55e-11,42;UBERON:0003509,2.55e-11,42;UBERON:0004572,2.55e-11,42;UBERON:0000055,2.85e-11,68;UBERON:0007500,3.60e-10,59;UBERON:0001981,3.60e-10,59;UBERON:0004537,3.60e-10,59;UBERON:0006965,3.60e-10,59;UBERON:0002329,1.42e-09,71;UBERON:0003059,1.42e-09,71;UBERON:0007282,1.42e-09,71;UBERON:0004290,1.42e-09,71;UBERON:0009618,1.42e-09,71;UBERON:0003077,2.15e-09,72;UBERON:0007285,2.15e-09,72;UBERON:0002049,2.24e-09,78;UBERON:0007798,2.24e-09,78;UBERON:0007524,3.20e-09,73;UBERON:0005933,3.67e-09,2;UBERON:0005942,3.67e-09,2;UBERON:0005932,3.67e-09,2;UBERON:0007503,2.01e-08,78;UBERON:0003834,5.80e-08,5;UBERON:0001533,5.80e-08,5;UBERON:0003498,7.73e-08,5;UBERON:0005985,7.73e-08,5;UBERON:0002067,9.08e-08,9;UBERON:0004016,9.08e-08,9;UBERON:0010083,9.08e-08,9;UBERON:0000486,1.01e-07,83;UBERON:0004872,1.64e-07,83 | |||
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| ||
|short_description=p6@FAH | |short_description=p6@FAH | ||
}} | }} |
Latest revision as of 08:59, 19 September 2015
Short description: | p6@FAH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAH_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | 0bp_to_ENST00000559217_5end |
EntrezGene: | FAH |
HGNC: | 3579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.53e-17 | 6 |
vascular associated smooth muscle cell | 4.12e-13 | 32 |
fibroblast of dermis | 1.21e-11 | 6 |
smooth muscle cell | 3.42e-09 | 43 |
smooth muscle myoblast | 3.42e-09 | 43 |
outer root sheath cell | 3.67e-09 | 2 |
smooth muscle cell of the subclavian artery | 5.80e-08 | 5 |
fibroblast of gingiva | 1.05e-07 | 5 |
immature conventional dendritic cell | 4.23e-07 | 5 |
common dendritic progenitor | 4.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 1.38e-12 | 33 |
systemic arterial system | 1.38e-12 | 33 |
artery | 2.55e-11 | 42 |
arterial blood vessel | 2.55e-11 | 42 |
arterial system | 2.55e-11 | 42 |
vessel | 2.85e-11 | 68 |
epithelial tube open at both ends | 3.60e-10 | 59 |
blood vessel | 3.60e-10 | 59 |
blood vasculature | 3.60e-10 | 59 |
vascular cord | 3.60e-10 | 59 |
somite | 1.42e-09 | 71 |
presomitic mesoderm | 1.42e-09 | 71 |
presumptive segmental plate | 1.42e-09 | 71 |
dermomyotome | 1.42e-09 | 71 |
trunk paraxial mesoderm | 1.42e-09 | 71 |
paraxial mesoderm | 2.15e-09 | 72 |
presumptive paraxial mesoderm | 2.15e-09 | 72 |
vasculature | 2.24e-09 | 78 |
vascular system | 2.24e-09 | 78 |
dense mesenchyme tissue | 3.20e-09 | 73 |
hair root sheath | 3.67e-09 | 2 |
hair outer root sheath | 3.67e-09 | 2 |
bulb of hair follicle | 3.67e-09 | 2 |
epithelial vesicle | 2.01e-08 | 78 |
thoracic segment blood vessel | 5.80e-08 | 5 |
subclavian artery | 5.80e-08 | 5 |
heart blood vessel | 7.73e-08 | 5 |
coronary vessel | 7.73e-08 | 5 |
dermis | 9.08e-08 | 9 |
dermatome | 9.08e-08 | 9 |
future dermis | 9.08e-08 | 9 |
multilaminar epithelium | 1.01e-07 | 83 |
splanchnic layer of lateral plate mesoderm | 1.64e-07 | 83 |