FFCP PHASE1:Hg19::chr4:95373080..95373104,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:95373080..95373104,+
|short_description=p1@PDLIM5
|description=CAGE_peak_1_at_PDLIM5_5end
|association_with_transcript=0bp_to_ENST00000503974,ENST000005044...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10611 | |EntrezGene=10611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17468 | |HGNC=17468 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBF5,D6RAA1,F5H7Y0 | |UniProt=E9PBF5,D6RAA1,F5H7Y0 | ||
|association_with_transcript=0bp_to_ENST00000503974,ENST00000504489,ENST00000542407_5end | |||
|cluster_id=chr4:95373080..95373104,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_PDLIM5_5end | |||
|id=chr4:95373080..95373104,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.99e-09!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.44e-09,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.16e-16!659;UBERON:0000926!5.22e-16!448;UBERON:0004120!5.22e-16!448;UBERON:0006603!5.22e-16!448;UBERON:0004872!1.44e-15!84;UBERON:0000467!8.74e-14!625;UBERON:0000480!1.80e-13!626;UBERON:0000055!3.82e-13!69;UBERON:0001981!4.14e-13!60;UBERON:0007500!4.14e-13!60;UBERON:0004537!4.14e-13!60;UBERON:0006965!4.14e-13!60;UBERON:0002049!5.11e-13!79;UBERON:0007798!5.11e-13!79;UBERON:0001009!2.45e-12!113;UBERON:0003914!5.39e-12!118;UBERON:0004535!4.93e-11!110;UBERON:0003081!3.20e-10!216;UBERON:0000923!3.58e-10!604;UBERON:0005291!3.58e-10!604;UBERON:0006598!3.58e-10!604;UBERON:0002532!3.58e-10!604;UBERON:0002050!4.45e-10!605;UBERON:0005423!4.45e-10!605;UBERON:0002204!1.27e-09!167;UBERON:0001637!1.45e-09!42;UBERON:0003509!1.45e-09!42;UBERON:0004572!1.45e-09!42;UBERON:0000922!2.18e-09!612;UBERON:0007100!3.33e-09!27;UBERON:0000490!2.49e-08!138;UBERON:0000948!1.84e-07!24;UBERON:0005498!1.84e-07!24;UBERON:0004140!1.84e-07!24;UBERON:0009881!1.84e-07!24;UBERON:0004141!1.84e-07!24;UBERON:0003084!1.84e-07!24;UBERON:0007005!1.84e-07!24;UBERON:0004139!1.84e-07!24;UBERON:0004291!1.84e-07!24;UBERON:0004573!2.36e-07!33;UBERON:0004571!2.36e-07!33;UBERON:0002385!5.19e-07!63;UBERON:0001015!5.19e-07!63;UBERON:0000383!5.19e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.23e-09;25!UBERON:0001637;1.19e-07;42!UBERON:0003509;1.19e-07;42!UBERON:0004572;1.19e-07;42!UBERON:0000948;4.64e-07;22!UBERON:0004573;9.23e-07;33!UBERON:0004571;9.23e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.07e-17,315;UBERON:0004120,2.07e-17,315;UBERON:0006603,2.07e-17,315;UBERON:0004872,4.50e-15,83;UBERON:0002050,3.04e-13,564;UBERON:0000923,1.13e-12,560;UBERON:0010316,1.13e-12,560;UBERON:0005291,1.13e-12,560;UBERON:0006598,1.13e-12,560;UBERON:0010317,1.13e-12,560;UBERON:0002532,1.13e-12,560;UBERON:0000055,1.17e-12,68;UBERON:0007500,1.32e-12,59;UBERON:0001981,1.32e-12,59;UBERON:0004537,1.32e-12,59;UBERON:0006965,1.32e-12,59;UBERON:0002049,1.50e-12,78;UBERON:0007798,1.50e-12,78;UBERON:0003081,3.20e-12,203;UBERON:0003914,3.65e-12,117;UBERON:0001009,6.35e-12,112;UBERON:0005423,5.94e-11,581;UBERON:0004535,1.23e-10,109;UBERON:0002204,2.34e-10,167;UBERON:0000922,9.91e-10,592;UBERON:0001637,1.45e-09,42;UBERON:0003509,1.45e-09,42;UBERON:0004572,1.45e-09,42;UBERON:0007100,3.33e-09,27;UBERON:0000948,1.84e-07,24;UBERON:0005498,1.84e-07,24;UBERON:0004140,1.84e-07,24;UBERON:0009881,1.84e-07,24;UBERON:0004141,1.84e-07,24;UBERON:0003084,1.84e-07,24;UBERON:0007005,1.84e-07,24;UBERON:0004139,1.84e-07,24;UBERON:0004291,1.84e-07,24;UBERON:0004573,2.36e-07,33;UBERON:0004571,2.36e-07,33;UBERON:0000490,4.28e-07,148;UBERON:0002385,7.62e-07,64;UBERON:0001015,7.62e-07,64;UBERON:0000383,7.62e-07,64 | |||
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10458907 | ||
|short_description=p1@PDLIM5 | |||
}} | }} |
Latest revision as of 10:12, 19 September 2015
Short description: | p1@PDLIM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDLIM5_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000503974, ENST00000504489, ENST00000542407_5end |
EntrezGene: | PDLIM5 |
HGNC: | 17468 |
UniProt: | E9PBF5D6RAA1F5H7Y0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.44e-09 | 121 |