FFCP PHASE1:Hg19::chr4:95375884..95375900,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10611 | |EntrezGene=10611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17468 | |HGNC=17468 | ||
|TSSclassifier=strong | |||
|UniProt=D6RB78 | |UniProt=D6RB78 | ||
|association_with_transcript=-495bp_to_ENST00000508216,ENST00000514743_5end | |association_with_transcript=-495bp_to_ENST00000508216,ENST00000514743_5end | ||
|cluster_id=chr4:95375884..95375900,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_15_at_PDLIM5_5end | |description=CAGE_peak_15_at_PDLIM5_5end | ||
|id=chr4:95375884..95375900,+ | |id=chr4:95375884..95375900,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.92e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.73e-08,5;CL:0002028,5.73e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.84e-34;1!UBERON:0010227;7.05e-34;1!UBERON:0010226;7.05e-34;1!UBERON:0005062;1.57e-09;4!UBERON:0007284;1.57e-09;4 | |||
|ontology_enrichment_disease=DOID:4362!1.04e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.03e-11!9;UBERON:0007100!1.80e-07!27;UBERON:0000002!2.90e-07!6;UBERON:0001560!2.90e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.38e-44;3!UBERON:0002084;7.05e-34;1!UBERON:0002079;7.05e-34;1!UBERON:0002146;7.05e-34;1!UBERON:0002082;7.05e-34;1!UBERON:0005623;7.05e-34;1!UBERON:0007100;3.03e-33;25!UBERON:0000948;1.93e-24;22!UBERON:0002081;1.07e-17;2!UBERON:0003978;2.89e-12;3!UBERON:0000946;2.89e-12;3!UBERON:0003103;1.88e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.38e-44,3;UBERON:0002084,5.05e-34,1;UBERON:0002082,5.05e-34,1;UBERON:0010226,5.05e-34,1;UBERON:0002146,7.06e-34,1;UBERON:0005623,7.06e-34,1;UBERON:0002079,9.85e-34,1;UBERON:0007100,8.03e-31,27;UBERON:0000948,1.82e-22,24;UBERON:0005498,1.82e-22,24;UBERON:0004140,1.82e-22,24;UBERON:0009881,1.82e-22,24;UBERON:0004141,1.82e-22,24;UBERON:0003084,1.82e-22,24;UBERON:0007005,1.82e-22,24;UBERON:0004139,1.82e-22,24;UBERON:0004291,1.82e-22,24;UBERON:0002081,1.27e-17,2;UBERON:0010227,1.27e-17,2;UBERON:0003103,1.39e-12,68;UBERON:0003978,2.89e-12,3;UBERON:0009751,2.89e-12,3;UBERON:0000946,2.89e-12,3;UBERON:0002523,2.89e-12,3;UBERON:0005983,2.89e-12,3;UBERON:0002165,2.89e-12,3;UBERON:0002062,2.89e-12,3;UBERON:0007280,2.89e-12,3;UBERON:0001009,8.45e-08,112;UBERON:0004872,6.74e-07,83 | |||
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| ||
|short_description=p15@PDLIM5 | |short_description=p15@PDLIM5 | ||
}} | }} |
Latest revision as of 10:14, 19 September 2015
Short description: | p15@PDLIM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PDLIM5_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -495bp_to_ENST00000508216, ENST00000514743_5end |
EntrezGene: | PDLIM5 |
HGNC: | 17468 |
UniProt: | D6RB78 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.73e-08 | 5 |
basophil mast progenitor cell | 5.73e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 2.38e-44 | 3 |
heart left ventricle | 5.05e-34 | 1 |
cardiac ventricle | 5.05e-34 | 1 |
future cardiac ventricle | 5.05e-34 | 1 |
pulmonary valve | 7.06e-34 | 1 |
semi-lunar valve | 7.06e-34 | 1 |
left cardiac atrium | 9.85e-34 | 1 |
primary circulatory organ | 8.03e-31 | 27 |
heart | 1.82e-22 | 24 |
primitive heart tube | 1.82e-22 | 24 |
primary heart field | 1.82e-22 | 24 |
anterior lateral plate mesoderm | 1.82e-22 | 24 |
heart tube | 1.82e-22 | 24 |
heart primordium | 1.82e-22 | 24 |
cardiac mesoderm | 1.82e-22 | 24 |
cardiogenic plate | 1.82e-22 | 24 |
heart rudiment | 1.82e-22 | 24 |
cardiac atrium | 1.27e-17 | 2 |
future cardiac atrium | 1.27e-17 | 2 |
compound organ | 1.39e-12 | 68 |
valve | 2.89e-12 | 3 |
cardiac mesenchyme | 2.89e-12 | 3 |
cardial valve | 2.89e-12 | 3 |
tunica intima | 2.89e-12 | 3 |
heart layer | 2.89e-12 | 3 |
endocardium | 2.89e-12 | 3 |
endocardial cushion | 2.89e-12 | 3 |
presumptive endocardium | 2.89e-12 | 3 |
circulatory system | 8.45e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 6.74e-07 | 83 |