FFCP PHASE1:Hg19::chr6:56819522..56819652,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:56819522..56819652,-
|short_description=p3@DST
|description=CAGE_peak_3_at_DST_5end
|association_with_transcript=-96bp_to_ENST00000449297_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100652766,667 | |EntrezGene=100652766,667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1090 | |HGNC=1090 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T0V7 | |UniProt=Q5T0V7 | ||
|association_with_transcript=-96bp_to_ENST00000449297_5end | |||
|cluster_id=chr6:56819522..56819652,- | |||
|coexpression_cluster_id=C2866 | |||
|description=CAGE_peak_3_at_DST_5end | |||
|id=chr6:56819522..56819652,- | |||
|ontology_enrichment_celltype=CL:0000055!7.34e-29!180;CL:0000057!1.33e-20!75;CL:0002620!4.45e-11!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.00e-11;23!CL:0000057;3.35e-08;73!CL:0002320;7.40e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.62e-21,76;CL:0002620,2.72e-11,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.63e-17!365;UBERON:0001017!9.47e-14!82;UBERON:0000955!6.93e-13!69;UBERON:0006238!6.93e-13!69;UBERON:0005743!1.50e-12!86;UBERON:0000073!2.56e-12!94;UBERON:0001016!2.56e-12!94;UBERON:0000033!6.81e-12!123;UBERON:0001049!1.66e-11!57;UBERON:0005068!1.66e-11!57;UBERON:0006241!1.66e-11!57;UBERON:0007135!1.66e-11!57;UBERON:0002616!1.02e-10!59;UBERON:0004121!2.31e-10!169;UBERON:0000153!5.19e-10!129;UBERON:0007811!5.19e-10!129;UBERON:0003075!5.75e-10!86;UBERON:0007284!5.75e-10!86;UBERON:0000924!1.78e-09!173;UBERON:0006601!1.78e-09!173;UBERON:0000914!5.15e-09!83;UBERON:0002329!5.15e-09!83;UBERON:0003077!5.15e-09!83;UBERON:0003059!5.15e-09!83;UBERON:0007282!5.15e-09!83;UBERON:0009618!5.15e-09!83;UBERON:0007285!5.15e-09!83;UBERON:0002346!1.04e-08!90;UBERON:0000481!3.15e-08!347;UBERON:0002199!1.76e-07!45;UBERON:0002416!1.76e-07!45;UBERON:0002097!1.76e-07!40;UBERON:0002780!4.07e-07!41;UBERON:0001890!4.07e-07!41;UBERON:0006240!4.07e-07!41;UBERON:0003102!4.26e-07!95;UBERON:0003080!7.90e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001434;1.68e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.90e-14,81;UBERON:0010314,4.99e-14,132;UBERON:0001016,8.04e-14,89;UBERON:0000955,2.11e-13,68;UBERON:0006238,2.11e-13,68;UBERON:0001049,4.28e-12,56;UBERON:0005068,4.28e-12,56;UBERON:0006241,4.28e-12,56;UBERON:0007135,4.28e-12,56;UBERON:0000073,5.89e-11,53;UBERON:0002616,5.89e-11,53;UBERON:0003075,5.95e-10,82;UBERON:0007284,5.95e-10,82;UBERON:0004121,7.07e-09,171;UBERON:0000924,7.07e-09,171;UBERON:0006601,7.07e-09,171;UBERON:0002346,1.61e-08,86;UBERON:0002199,1.21e-07,46;UBERON:0002416,1.21e-07,46;UBERON:0002097,1.49e-07,41;UBERON:0007524,2.46e-07,73;UBERON:0002780,3.05e-07,41;UBERON:0001890,3.05e-07,41;UBERON:0003080,3.05e-07,41;UBERON:0006240,3.05e-07,41;UBERON:0010371,4.14e-07,104;UBERON:0003077,4.19e-07,72;UBERON:0007285,4.19e-07,72;UBERON:0002329,6.01e-07,71;UBERON:0003059,6.01e-07,71;UBERON:0007282,6.01e-07,71;UBERON:0004290,6.01e-07,71;UBERON:0009618,6.01e-07,71;UBERON:0003076,9.15e-07,15;UBERON:0003057,9.15e-07,15 | |||
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| ||
|short_description=p3@DST | |||
}} | }} |
Latest revision as of 10:19, 19 September 2015
Short description: | p3@DST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DST_5end |
Coexpression cluster: | C2866_Fibroblast_Preadipocyte_rhabdomyosarcoma_Myoblast_mesenchymal_Smooth_liposarcoma |
Association with transcript: | -96bp_to_ENST00000449297_5end |
EntrezGene: | 100652766,667 |
HGNC: | 1090 |
UniProt: | Q5T0V7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.62e-21 | 76 |
skin fibroblast | 2.72e-11 | 23 |