FFCP PHASE2:Hg19::chr14:23876391..23876406,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4624 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:7576 |TSSclassifier=strong ...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=7576 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P13533 | ||
|association_with_transcript=25bp_to_D00943_5end | |association_with_transcript=25bp_to_D00943_5end | ||
|cluster_id=chr14:23876391..23876406,- | |cluster_id=chr14:23876391..23876406,- | ||
Latest revision as of 10:34, 19 September 2015
| Short description: | p4@MYH6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_MYH6_5end |
| Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
| Association with transcript: | 25bp_to_D00943_5end |
| EntrezGene: | MYH6 |
| HGNC: | 7576 |
| UniProt: | P13533 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@MYH6 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| left cardiac atrium | 2.42e-50 | 1 |
| mitral valve | 3.99e-50 | 1 |
| primary circulatory organ | 5.44e-30 | 27 |
| cardiac atrium | 5.56e-26 | 2 |
| future cardiac atrium | 5.56e-26 | 2 |
| atrioventricular valve | 7.14e-26 | 2 |
| cardiac chamber | 8.00e-18 | 3 |
| valve | 9.46e-18 | 3 |
| cardiac mesenchyme | 9.46e-18 | 3 |
| cardial valve | 9.46e-18 | 3 |
Showing 1 to 10 of 28 entries
| Ontology term | p-value | n |
|---|---|---|
| heart disease | 1.55e-98 | 2 |
| cardiovascular system disease | 5.14e-50 | 4 |
| vascular disease | 6.58e-50 | 1 |
| ischemia | 6.58e-50 | 1 |
| extrinsic cardiomyopathy | 6.58e-50 | 1 |
| myocardial ischemia | 6.58e-50 | 1 |
| myocardial infarction | 6.58e-50 | 1 |
Showing 1 to 7 of 7 entries
