FFCP PHASE1:Hg19::chrX:130423225..130423228,-: Difference between revisions
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|id=chrX:130423225..130423228,-
|short_description=p5@IGSF1
|description=CAGE_peak_5_at_IGSF1_5end
|association_with_transcript=23bp_to_ENST00000370910_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3547 | |EntrezGene=3547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5948 | |HGNC=5948 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000370910_5end | |||
|cluster_id=chrX:130423225..130423228,- | |||
|coexpression_cluster_id=C155 | |||
|description=CAGE_peak_5_at_IGSF1_5end | |||
|id=chrX:130423225..130423228,- | |||
|ontology_enrichment_celltype=CL:0002322!3.86e-15!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.73e-29;1!UBERON:0003056;1.04e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.35e-08;4!DOID:1612;2.35e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.11e-08,4;DOID:1612,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.50e-16!94;UBERON:0001016!1.50e-16!94;UBERON:0007023!4.63e-15!115;UBERON:0001049!5.10e-15!57;UBERON:0005068!5.10e-15!57;UBERON:0006241!5.10e-15!57;UBERON:0007135!5.10e-15!57;UBERON:0005743!1.87e-14!86;UBERON:0001017!4.66e-14!82;UBERON:0003075!6.74e-13!86;UBERON:0007284!6.74e-13!86;UBERON:0002346!4.52e-12!90;UBERON:0002616!3.77e-11!59;UBERON:0003080!4.13e-10!42;UBERON:0003056!2.59e-09!61;UBERON:0004121!2.81e-09!169;UBERON:0000924!6.76e-09!173;UBERON:0006601!6.76e-09!173;UBERON:0002780!8.78e-09!41;UBERON:0001890!8.78e-09!41;UBERON:0006240!8.78e-09!41;UBERON:0000955!9.01e-09!69;UBERON:0006238!9.01e-09!69;UBERON:0003296!3.90e-08!4;UBERON:0010133!3.90e-08!4;UBERON:0000007!6.90e-08!2;UBERON:0001894!1.59e-07!7;UBERON:0006222!1.59e-07!7;UBERON:0005162!3.44e-07!2;UBERON:0000122!3.44e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0000941;2.73e-29;1!UBERON:0001785;2.73e-29;1!UBERON:0002464;2.73e-29;1!UBERON:0004904;2.73e-29;1!UBERON:0001021;2.73e-29;1!UBERON:0001894;2.46e-17;7!UBERON:0003714;2.21e-15;2!UBERON:0005162;2.21e-15;2!UBERON:0000122;2.21e-15;2!UBERON:0002368;2.41e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.13e-57,2;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0000941,2.37e-29,1;UBERON:0001785,2.37e-29,1;UBERON:0002464,2.37e-29,1;UBERON:0004904,2.37e-29,1;UBERON:0001021,2.37e-29,1;UBERON:0003902,2.37e-29,1;UBERON:0005425,2.37e-29,1;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0003714,2.05e-15,2;UBERON:0005162,2.05e-15,2;UBERON:0000122,2.05e-15,2;UBERON:0001781,2.26e-08,4;UBERON:0002368,5.08e-08,35 | |||
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| ||
|short_description=p5@IGSF1 | |||
}} | }} |
Latest revision as of 10:36, 19 September 2015
Short description: | p5@IGSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IGSF1_5end |
Coexpression cluster: | C155_pituitary_placenta_nonsmall_cervical_smallcell_choriocarcinoma_epitheloid |
Association with transcript: | 23bp_to_ENST00000370910_5end |
EntrezGene: | IGSF1 |
HGNC: | 5948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.13e-57 | 2 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
cranial nerve II | 2.37e-29 | 1 |
cranial nerve | 2.37e-29 | 1 |
nerve trunk | 2.37e-29 | 1 |
nerve connecting eye with brain | 2.37e-29 | 1 |
nerve | 2.37e-29 | 1 |
retinal neural layer | 2.37e-29 | 1 |
presumptive neural retina | 2.37e-29 | 1 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
neural tissue | 2.05e-15 | 2 |
multi cell component structure | 2.05e-15 | 2 |
neuron projection bundle | 2.05e-15 | 2 |
layer of retina | 2.26e-08 | 4 |
endocrine gland | 5.08e-08 | 35 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.11e-08 | 4 |
breast cancer | 2.11e-08 | 4 |