FFCP PHASE1:Hg19::chr3:68053515..68053522,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=407738 | |EntrezGene=407738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21587 | |HGNC=21587 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_uc003dne.2_5end | |association_with_transcript=61bp_to_uc003dne.2_5end | ||
|cluster_id=chr3:68053515..68053522,+ | |||
|coexpression_cluster_id=C376 | |coexpression_cluster_id=C376 | ||
|description=CAGE_peak_5_at_FAM19A1_5end | |description=CAGE_peak_5_at_FAM19A1_5end | ||
Latest revision as of 11:04, 19 September 2015
| Short description: | p5@FAM19A1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_FAM19A1_5end |
| Coexpression cluster: | C376_brain_temporal_insula_frontal_occipital_postcentral_paracentral |
| Association with transcript: | 61bp_to_uc003dne.2_5end |
| EntrezGene: | FAM19A1 |
| HGNC: | 21587 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p5@FAM19A1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 2.74e-32 | 5 |
| Ammon's horn | 4.66e-21 | 2 |
| lobe parts of cerebral cortex | 4.66e-21 | 2 |
| hippocampal formation | 4.66e-21 | 2 |
| limbic lobe | 4.66e-21 | 2 |
| regional part of cerebral cortex | 3.17e-16 | 22 |
| brain | 9.02e-15 | 68 |
| future brain | 9.02e-15 | 68 |
| pons | 1.40e-14 | 3 |
| cerebral cortex | 1.86e-14 | 25 |
Showing 1 to 10 of 34 entries
