FFCP PHASE1:Hg19::chr6:6318851..6318869,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2162 | |EntrezGene=2162 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3531 | |HGNC=3531 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_AB590527,DQ893561,DQ894109,EU176539_5end | |association_with_transcript=27bp_to_AB590527,DQ893561,DQ894109,EU176539_5end | ||
|cluster_id=chr6:6318851..6318869,- | |||
|coexpression_cluster_id=C4620 | |||
|description=CAGE_peak_2_at_F13A1_5end | |description=CAGE_peak_2_at_F13A1_5end | ||
|id=chr6:6318851..6318869,- | |id=chr6:6318851..6318869,- | ||
|ontology_enrichment_celltype=CL:0002194!2.20e-12!63;CL:0000576!2.20e-12!63;CL:0000040!2.20e-12!63;CL:0000559!2.20e-12!63;CL:0000766!5.85e-12!76;CL:0002009!8.74e-12!65;CL:0000839!2.03e-11!70;CL:0000557!3.73e-11!71;CL:0000763!4.49e-09!112;CL:0000049!4.49e-09!112;CL:0002619!2.76e-07!3;CL:0002057!7.12e-07!42;CL:0000738!9.75e-07!140 | |ontology_enrichment_celltype=CL:0002194!2.20e-12!63;CL:0000576!2.20e-12!63;CL:0000040!2.20e-12!63;CL:0000559!2.20e-12!63;CL:0000766!5.85e-12!76;CL:0002009!8.74e-12!65;CL:0000839!2.03e-11!70;CL:0000557!3.73e-11!71;CL:0000763!4.49e-09!112;CL:0000049!4.49e-09!112;CL:0002619!2.76e-07!3;CL:0002057!7.12e-07!42;CL:0000738!9.75e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0002619;9.78e-29;3!CL:0000840;5.18e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,1.07e-28,3;CL:0000840,5.26e-07,5;CL:0001029,5.26e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010227;8.53e-11;1!UBERON:0010226;3.29e-10;1!UBERON:0010115;3.29e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.77e-29!115;UBERON:0002390!2.40e-16!102;UBERON:0003061!2.40e-16!102;UBERON:0002193!5.56e-15!112;UBERON:0000178!2.49e-11!15;UBERON:0000179!2.49e-11!15;UBERON:0000463!2.49e-11!15;UBERON:0002371!4.20e-09!80;UBERON:0001474!5.41e-08!86;UBERON:0003081!6.49e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.02e-15;15!UBERON:0000179;4.02e-15;15!UBERON:0000463;4.02e-15;15!UBERON:0004151;3.68e-13;3!UBERON:0002079;8.53e-11;1!UBERON:0007029;1.03e-10;1!UBERON:0001301;1.57e-10;1!UBERON:0002363;3.29e-10;1!UBERON:0000029;3.29e-10;1!UBERON:0002084;3.29e-10;1!UBERON:0002082;3.29e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.73e-15,15;UBERON:0000179,3.73e-15,15;UBERON:0000463,3.73e-15,15;UBERON:0004151,3.57e-13,3;UBERON:0002079,8.95e-11,1;UBERON:0007029,1.08e-10,1;UBERON:0001301,1.43e-10,1;UBERON:0000029,2.74e-10,1;UBERON:0002084,3.01e-10,1;UBERON:0002082,3.01e-10,1;UBERON:0010226,3.01e-10,1;UBERON:0002193,3.82e-10,108;UBERON:0002363,3.96e-10,1;UBERON:0007645,3.96e-10,1;UBERON:0007647,3.96e-10,1;UBERON:0010115,3.96e-10,1;UBERON:0007023,1.71e-09,114;UBERON:0002390,1.76e-09,98;UBERON:0003061,1.76e-09,98 | |||
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| ||
|short_description=p2@F13A1 | |short_description=p2@F13A1 | ||
}} | }} |
Latest revision as of 11:43, 19 September 2015
Short description: | p2@F13A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_F13A1_5end |
Coexpression cluster: | C4620_CD14_Dendritic_Whole_left_Monocytederived_lymph_skin |
Association with transcript: | 27bp_to_AB590527, DQ893561, DQ894109, EU176539_5end |
EntrezGene: | F13A1 |
HGNC: | 3531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 1.07e-28 | 3 |
immature conventional dendritic cell | 5.26e-07 | 5 |
common dendritic progenitor | 5.26e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood | 3.73e-15 | 15 |
haemolymphatic fluid | 3.73e-15 | 15 |
organism substance | 3.73e-15 | 15 |
cardiac chamber | 3.57e-13 | 3 |
left cardiac atrium | 8.95e-11 | 1 |
surface | 1.08e-10 | 1 |
epididymis | 1.43e-10 | 1 |
lymph node | 2.74e-10 | 1 |
heart left ventricle | 3.01e-10 | 1 |
cardiac ventricle | 3.01e-10 | 1 |
future cardiac ventricle | 3.01e-10 | 1 |
hemolymphoid system | 3.82e-10 | 108 |
dura mater | 3.96e-10 | 1 |
future meninx | 3.96e-10 | 1 |
ectomeninx | 3.96e-10 | 1 |
future dura mater | 3.96e-10 | 1 |
adult organism | 1.71e-09 | 114 |
hematopoietic system | 1.76e-09 | 98 |
blood island | 1.76e-09 | 98 |