FFCP PHASE1:Hg19::chr12:57480468..57480488,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:57480468..57480488,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr12:57480468..57480488,+ | |description=CAGE_peak_at_chr12:57480468..57480488,+ | ||
|id=chr12:57480468..57480488,+ | |id=chr12:57480468..57480488,+ | ||
|ontology_enrichment_celltype=CL:0000860!3.07e-26!45;CL:0002057!2.71e-25!42;CL:0002009!4.16e-18!65;CL:0000557!1.11e-16!71;CL:0002194!2.20e-16!63;CL:0000576!2.20e-16!63;CL:0000040!2.20e-16!63;CL:0000559!2.20e-16!63;CL:0000839!1.06e-14!70;CL:0000766!6.96e-14!76;CL:0002031!7.25e-11!124;CL:0002087!1.90e-10!119;CL:0000738!3.10e-10!140;CL:0000763!1.81e-09!112;CL:0000049!1.81e-09!112;CL:0002032!2.66e-07!165;CL:0000837!2.66e-07!165;CL:0000037!4.59e-07!172;CL:0000566!4.59e-07!172;CL:0000988!5.73e-07!182 | |ontology_enrichment_celltype=CL:0000860!3.07e-26!45;CL:0002057!2.71e-25!42;CL:0002009!4.16e-18!65;CL:0000557!1.11e-16!71;CL:0002194!2.20e-16!63;CL:0000576!2.20e-16!63;CL:0000040!2.20e-16!63;CL:0000559!2.20e-16!63;CL:0000839!1.06e-14!70;CL:0000766!6.96e-14!76;CL:0002031!7.25e-11!124;CL:0002087!1.90e-10!119;CL:0000738!3.10e-10!140;CL:0000763!1.81e-09!112;CL:0000049!1.81e-09!112;CL:0002032!2.66e-07!165;CL:0000837!2.66e-07!165;CL:0000037!4.59e-07!172;CL:0000566!4.59e-07!172;CL:0000988!5.73e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.76e-58;33!CL:0002057;9.76e-58;33!CL:0000473;4.04e-40;39!CL:0000234;4.04e-40;39!CL:0000576;4.10e-29;48!CL:0000766;4.10e-18;69!CL:0002087;6.92e-12;104!CL:0000763;2.56e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.31e-61,42;CL:0002057,7.31e-61,42;CL:0000473,7.83e-53,48;CL:0000234,7.83e-53,48;CL:0002194,1.39e-41,59;CL:0000576,1.39e-41,59;CL:0000040,1.39e-41,59;CL:0000559,1.39e-41,59;CL:0002009,3.94e-40,61;CL:0000766,2.03e-37,72;CL:0000839,7.03e-37,66;CL:0000557,2.76e-36,67;CL:0000763,7.31e-24,108;CL:0000049,7.31e-24,108;CL:0002087,8.06e-20,115;CL:0002031,7.44e-19,120;CL:0000738,3.12e-18,136;CL:0002032,7.62e-15,161;CL:0000837,7.62e-15,161;CL:0000037,4.48e-14,168;CL:0000988,3.57e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.35e-40;42!UBERON:0003099;1.59e-08;1!UBERON:0003852;1.59e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.17e-15!80;UBERON:0001474!7.15e-15!86;UBERON:0004765!1.54e-12!101;UBERON:0001434!1.54e-12!101;UBERON:0002193!6.22e-11!112;UBERON:0002390!9.39e-11!102;UBERON:0003061!9.39e-11!102;UBERON:0002405!3.67e-10!115;UBERON:0002204!1.13e-08!167;UBERON:0003081!6.31e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!1.17e-15!80;UBERON:0001474!7.15e-15!86;UBERON:0004765!1.54e-12!101;UBERON:0001434!1.54e-12!101;UBERON:0002193!6.22e-11!112;UBERON:0002390!9.39e-11!102;UBERON:0003061!9.39e-11!102;UBERON:0002405!3.67e-10!115;UBERON:0002204!1.13e-08!167;UBERON:0003081!6.31e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0005705;1.59e-08;1!UBERON:0008193;1.59e-08;1!UBERON:0010912;1.59e-08;1!UBERON:0002514;1.59e-08;1!UBERON:0003457;1.59e-08;1!UBERON:0008907;1.59e-08;1!UBERON:0008001;1.59e-08;1!UBERON:0007213;1.59e-08;1!UBERON:0009891;1.59e-08;1!UBERON:0007914;1.59e-08;1!UBERON:0007375;1.59e-08;1!UBERON:0003323;1.59e-08;1!UBERON:0010258;1.59e-08;1!UBERON:0005253;1.59e-08;1!UBERON:0007842;1.59e-08;1!UBERON:0002397;1.59e-08;1!UBERON:0003113;1.59e-08;1!UBERON:0003277;1.59e-08;1!UBERON:0001709;1.59e-08;1!UBERON:0002244;1.59e-08;1!UBERON:0005620;1.59e-08;1!UBERON:0010364;1.59e-08;1!UBERON:0004288;1.59e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.20e-32,82;UBERON:0002371,1.22e-31,76;UBERON:0004765,3.22e-29,90;UBERON:0001434,5.76e-26,100;UBERON:0002405,2.76e-25,93;UBERON:0002390,7.87e-24,98;UBERON:0003061,7.87e-24,98;UBERON:0002193,2.55e-21,108;UBERON:0002204,3.89e-14,167;UBERON:0003081,2.34e-12,203;UBERON:0005705,1.91e-08,1;UBERON:0008193,1.91e-08,1;UBERON:0010912,1.91e-08,1;UBERON:0002514,1.91e-08,1;UBERON:0003457,1.91e-08,1;UBERON:0008907,1.91e-08,1;UBERON:0008001,1.91e-08,1;UBERON:0007213,1.91e-08,1;UBERON:0009891,1.91e-08,1;UBERON:0007914,1.91e-08,1;UBERON:0009292,1.91e-08,1;UBERON:0003099,1.91e-08,1;UBERON:0007375,1.91e-08,1;UBERON:0003323,1.91e-08,1;UBERON:0010258,1.91e-08,1;UBERON:0007842,1.91e-08,1;UBERON:0009494,1.91e-08,1;UBERON:0010042,1.91e-08,1;UBERON:0010045,1.91e-08,1;UBERON:0010259,1.91e-08,1;UBERON:0010359,1.91e-08,1;UBERON:0009526,1.91e-08,1;UBERON:0002397,1.91e-08,1;UBERON:0003113,1.91e-08,1;UBERON:0003277,1.91e-08,1;UBERON:0001709,1.91e-08,1;UBERON:0004066,1.91e-08,1;UBERON:0002244,1.91e-08,1;UBERON:0005620,1.91e-08,1;UBERON:0004362,1.91e-08,1;UBERON:0010364,1.91e-08,1;UBERON:0010046,1.91e-08,1;UBERON:0005868,1.91e-08,1;UBERON:0007238,1.91e-08,1;UBERON:0004288,1.91e-08,1;UBERON:0004068,1.91e-08,1;UBERON:0010334,1.91e-08,1;UBERON:0003852,1.91e-08,1;UBERON:0010253,1.91e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,1.10799081706375,1.00272223735071,0.434021741431704,0,0,0,0,0,0.242584061187816,0.464858073811369,0,2.47765096716083,6.04154023876516,2.0492856522328,3.31075121844019,11.0318617835718,10.973239620925,6.77132432971709,0.376484679085209,0.272906150057846,0.674170453335254,19.5893691117378,17.6510964891852,21.7374622771674,0.329851300186716,0,0.426224750532694,3.48251086354301,8.5107783703671,7.4738669879469,1.00499466102697,0,0.434377689410233,4.23779651843358,6.2607198117886,4.43047342417238,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0.174129737299267,0,0,0,0,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0,0,1.53316637465883,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.508189248444927,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0.451199612907412,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0,1.52581736317083,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.19351266257817,0.146178634172371,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,1.24632101408756,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0.121792598380896,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.247871528518004,0,0,0,0.80057074828547,1.05802783107205,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0.316027223465453,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0.633492505057185,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,1.10799081706375,1.00272223735071,0.434021741431704,0,0,0,0,0,0.242584061187816,0.464858073811369,0,2.47765096716083,6.04154023876516,2.0492856522328,3.31075121844019,11.0318617835718,10.973239620925,6.77132432971709,0.376484679085209,0.272906150057846,0.674170453335254,19.5893691117378,17.6510964891852,21.7374622771674,0.329851300186716,0,0.426224750532694,3.48251086354301,8.5107783703671,7.4738669879469,1.00499466102697,0,0.434377689410233,4.23779651843358,6.2607198117886,4.43047342417238,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0.174129737299267,0,0,0,0,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0,0,1.53316637465883,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.508189248444927,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0.451199612907412,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0,1.52581736317083,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.19351266257817,0.146178634172371,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,1.24632101408756,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0.121792598380896,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.247871528518004,0,0,0,0.80057074828547,1.05802783107205,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0.316027223465453,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0.633492505057185,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:57480468..57480488,+ | |short_description=p@chr12:57480468..57480488,+ | ||
}} | }} |
Latest revision as of 12:46, 19 September 2015
Short description: | p@chr12:57480468..57480488, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57480468..57480488, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.31e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.31e-61 | 42 |
defensive cell | 7.83e-53 | 48 |
phagocyte | 7.83e-53 | 48 |
monopoietic cell | 1.39e-41 | 59 |
monocyte | 1.39e-41 | 59 |
monoblast | 1.39e-41 | 59 |
promonocyte | 1.39e-41 | 59 |
macrophage dendritic cell progenitor | 3.94e-40 | 61 |
myeloid leukocyte | 2.03e-37 | 72 |
myeloid lineage restricted progenitor cell | 7.03e-37 | 66 |
granulocyte monocyte progenitor cell | 2.76e-36 | 67 |
myeloid cell | 7.31e-24 | 108 |
common myeloid progenitor | 7.31e-24 | 108 |
nongranular leukocyte | 8.06e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 7.44e-19 | 120 |
leukocyte | 3.12e-18 | 136 |
hematopoietic oligopotent progenitor cell | 7.62e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.62e-15 | 161 |
hematopoietic stem cell | 4.48e-14 | 168 |
hematopoietic cell | 3.57e-13 | 177 |