FFCP PHASE1:Hg19::chr11:65788650..65788665,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:65788650..65788665,- to FFCP PHASE1:Hg19::chr11:65788650..65788665,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=117144 | |EntrezGene=117144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17116 | |HGNC=17116 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000529244_5end | |||
|cluster_id=chr11:65788650..65788665,- | |||
|description=CAGE_peak_2_at_CATSPER1_5end | |||
|id=chr11:65788650..65788665,- | |||
|ontology_enrichment_celltype=CL:0000766!3.37e-23!76;CL:0000839!3.95e-23!70;CL:0000557!1.37e-21!71;CL:0002194!2.39e-21!63;CL:0000576!2.39e-21!63;CL:0000040!2.39e-21!63;CL:0000559!2.39e-21!63;CL:0002009!4.39e-20!65;CL:0000763!5.34e-20!112;CL:0000049!5.34e-20!112;CL:0000860!4.34e-18!45;CL:0002057!4.06e-16!42;CL:0000063!9.48e-10!578;CL:0002032!1.93e-09!165;CL:0000837!1.93e-09!165;CL:0000548!2.74e-09!679;CL:0000004!2.74e-09!679;CL:0000255!2.74e-09!679;CL:0000988!2.82e-09!182;CL:0000012!6.17e-09!682;CL:0000037!6.98e-09!172;CL:0000566!6.98e-09!172;CL:0002320!1.44e-08!365;CL:0002031!1.86e-08!124;CL:0000738!1.01e-07!140;CL:0002087!1.57e-07!119;CL:0000134!1.59e-07!358;CL:0000003!3.68e-07!722;CL:0000219!6.89e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.49e-09;5!CL:0000163;1.03e-07;9!CL:0000860;1.38e-07;33!CL:0002057;1.38e-07;33!CL:0000766;2.11e-07;69!CL:0000576;3.88e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,5.12e-11,66;CL:0000766,5.36e-11,72;CL:0000557,8.67e-11,67;CL:0000097,3.08e-09,5;CL:0002028,3.08e-09,5;CL:0000763,1.48e-08,108;CL:0000049,1.48e-08,108;CL:0000163,1.20e-07,9;CL:0002194,1.33e-07,59;CL:0000576,1.33e-07,59;CL:0000040,1.33e-07,59;CL:0000559,1.33e-07,59;CL:0000860,1.71e-07,42;CL:0002057,1.71e-07,42;CL:0002009,2.99e-07,61;CL:0000650,9.55e-07,2;CL:1000500,9.55e-07,2;CL:1000618,9.55e-07,2;CL:1001318,9.55e-07,2;CL:0002173,9.55e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;4.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.53e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!8.72e-19!80;UBERON:0002390!1.91e-18!102;UBERON:0003061!1.91e-18!102;UBERON:0001474!1.45e-17!86;UBERON:0002193!6.54e-17!112;UBERON:0004765!1.73e-15!101;UBERON:0001434!1.73e-15!101;UBERON:0002405!1.56e-11!115;UBERON:0002384!8.34e-09!375;UBERON:0003081!7.40e-08!216;UBERON:0002204!2.59e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;5.57e-08;10!UBERON:0003891;5.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.30e-09,76;UBERON:0002390,1.35e-08,98;UBERON:0003061,1.35e-08,98;UBERON:0001474,4.90e-08,82;UBERON:0001264,5.10e-08,10;UBERON:0004765,7.98e-08,90;UBERON:0001434,1.91e-07,100;UBERON:0002193,2.38e-07,108;UBERON:0003891,6.71e-07,4;UBERON:0003567,9.55e-07,2;UBERON:0003838,9.55e-07,2;UBERON:0003586,9.55e-07,2;UBERON:0005169,9.55e-07,2;UBERON:0002321,9.55e-07,2;UBERON:0005215,9.55e-07,2;UBERON:0002303,9.55e-07,2;UBERON:0002319,9.55e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,0.263766978228454,0.247532705920093,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,1.57345710739562,0.383829398097213,0.619264493264304,0,0,0,0,0,0,1.66198622559563,0.802177789880567,0.651032612147555,0.223915474239924,0,0.257575567634187,1.89017710413434,1.13362783106643,0.970336244751265,0.929716147622738,1.6446715520873,0.619412741790207,0.575384784644301,0,1.18241114944293,1.03423704220986,0,0,2.07066573496865,1.36453075028923,0.674170453335254,0.918251677112708,0.320929027076094,0,1.31940520074686,0.997318288108159,0.426224750532694,1.7412554317715,0,0,0.251248665256743,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0.632924774881769,0.633765858935825,0.212604299965044,0.628975936525128,2.58355851636939,2.4028302854641,0.964353520182481,0,0.39783335439818,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0.486634870302636,0.189069634328136,0.221729397462564,0.263504357079378,0,0,0,0,0.348259474598534,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0.404132016209064,0.326923806226917,0,0,0.234321431833797,0,0,0.298897361103602,0.822041490506354,0.485618833104395,0.421352420106746,0.408308342509787,0.737005903870608,0.206651562351531,0,0.247266929278557,0.910161361938026,0,1.17835279767846,0.750711119231785,0.831192346452549,0,0,0.150238058906597,0.226864366320042,0.538168907066586,0.427114777637135,0,0,0,0.257640540045629,0.18611685633159,0.506328996723799,0.292311015483596,0,0.0920498986422993,0,0,0,0.847802961552438,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0.651616610620649,1.03993478527958,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0,0.790204397959275,0,0.492434012174795,0.234004265139238,0.445893486866185,0,0,0,0.179117045405697,0,0,0,1.76096868026452,1.65862492432618,1.00883967391873,1.00993946741104,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0.771622122786426,0,0.532844358032199,0,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0.289562613335158,0.821905290201534,0.179060963239896,0.112085143993527,0,0,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0,0.49076596687656,1.00034104211935,0.271265023699736,0,0,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0.195801157462741,0.343143423810856,0.413536052245775,0,0.106727557803444,0.606255142892519,0,0.30239029332968,0,0.306923946576125,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0.231046011313244,0.784349769176855,0,0.633309773357254,0,0,0.431831832204279,0,1.35473218771926,1.50506932156456,1.01950509218015,1.66215201785745,0.671624264166535,0,0.261435451024901,0.256450125116389,0.984043937099117,0,0,0.366277859273374,0.330037999682352,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0.429374660225974,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0.75894634753143,0.699869440489966,0.288666338176536,0,0,0,0,0,0,0,1.01489521846434,0,1.13929437434833,0.476463550915578,0.411362273086194,0.648473311192717,1.08006287447623,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,4.25846237690326,0,2.76516687877612,1.56573275524691,2.0021897005429,0.390776190804081,5.2897173040096,0,0.270455678475983,0,0,0,0,0,1.5602073798847,0,0.47748896947538,0,0.614321404198464,0,0,1.55832187032068,0.659215496907038,0,0.19924798825107,0,0,3.47713520507326,0,0.311039587661807,0.449341755736634,0.537063524026827,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,5.84783395673362,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.341826167541004,0,0.269272933229316,0,2.55200927785536,0.366390373607449,2.66517388009317,0,0.156980256395025,2.32696354660219,0.902382642468723,0.19606253431774,0.335643173951685,0.37950746544837,0.476809736941136,2.53197677433632,1.95879369790977,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.126373159256976,0.450970258243478,0.103688191397247,5.31723098165748,2.97892760287949,2.5114633472578,2.38944859545918,0.569219092059585,0.416024019039416,0,0,0.34823682632161,0,0.343972064943233,1.35458863804719,0.730893170861856,1.06750094169172,0,0,0,2.60379656828827,0.794858446811959,0,0.782205530939212,0.240476460754601,0,0.999048047910651,0,0,0,0,8.07641481175311,1.41416420770077,2.03856309110421,0.627617077873999,1.32597682927218,0,0,0,0,0.429765441419957,0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| ||
|short_description=p2@CATSPER1 | |||
}} | }} |
Latest revision as of 12:55, 19 September 2015
Short description: | p2@CATSPER1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CATSPER1_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000529244_5end |
EntrezGene: | CATSPER1 |
HGNC: | 17116 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 5.12e-11 | 66 |
myeloid leukocyte | 5.36e-11 | 72 |
granulocyte monocyte progenitor cell | 8.67e-11 | 67 |
mast cell | 3.08e-09 | 5 |
basophil mast progenitor cell | 3.08e-09 | 5 |
myeloid cell | 1.48e-08 | 108 |
common myeloid progenitor | 1.48e-08 | 108 |
endocrine cell | 1.20e-07 | 9 |
monopoietic cell | 1.33e-07 | 59 |
monocyte | 1.33e-07 | 59 |
monoblast | 1.33e-07 | 59 |
promonocyte | 1.33e-07 | 59 |
classical monocyte | 1.71e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.71e-07 | 42 |
macrophage dendritic cell progenitor | 2.99e-07 | 61 |
mesangial cell | 9.55e-07 | 2 |
kidney interstitial cell | 9.55e-07 | 2 |
juxtaglomerular complex cell | 9.55e-07 | 2 |
renal interstitial pericyte | 9.55e-07 | 2 |
extraglomerular mesangial cell | 9.55e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.30e-09 | 76 |
hematopoietic system | 1.35e-08 | 98 |
blood island | 1.35e-08 | 98 |
bone element | 4.90e-08 | 82 |
pancreas | 5.10e-08 | 10 |
skeletal element | 7.98e-08 | 90 |
skeletal system | 1.91e-07 | 100 |
hemolymphoid system | 2.38e-07 | 108 |
stroma | 6.71e-07 | 4 |
abdomen connective tissue | 9.55e-07 | 2 |
abdominal segment connective tissue | 9.55e-07 | 2 |
trunk connective tissue | 9.55e-07 | 2 |
interstitial tissue | 9.55e-07 | 2 |
extraglomerular mesangium | 9.55e-07 | 2 |
kidney interstitium | 9.55e-07 | 2 |
juxtaglomerular apparatus | 9.55e-07 | 2 |
mesangium | 9.55e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.53e-07 | 2 |