FFCP PHASE1:Hg19::chr12:57674546..57674557,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22864 | |EntrezGene=22864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29167 | |HGNC=29167 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-233bp_to_uc009zpn.1_5end | |association_with_transcript=-233bp_to_uc009zpn.1_5end | ||
|cluster_id=chr12:57674546..57674557,- | |||
|coexpression_cluster_id=C2222 | |||
|description=CAGE_peak_25_at_R3HDM2_5end | |description=CAGE_peak_25_at_R3HDM2_5end | ||
|id=chr12:57674546..57674557,- | |id=chr12:57674546..57674557,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.15e-15;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!8.39e-27!32;UBERON:0002780!1.09e-26!41;UBERON:0001890!1.09e-26!41;UBERON:0006240!1.09e-26!41;UBERON:0003080!6.81e-26!42;UBERON:0001893!6.76e-25!34;UBERON:0002020!7.78e-25!34;UBERON:0003528!7.78e-25!34;UBERON:0002791!3.36e-23!33;UBERON:0001049!1.55e-20!57;UBERON:0005068!1.55e-20!57;UBERON:0006241!1.55e-20!57;UBERON:0007135!1.55e-20!57;UBERON:0002616!1.37e-19!59;UBERON:0000955!1.51e-19!69;UBERON:0006238!1.51e-19!69;UBERON:0003056!3.35e-17!61;UBERON:0002619!7.58e-17!22;UBERON:0001017!1.38e-16!82;UBERON:0001950!5.16e-16!20;UBERON:0005743!1.94e-15!86;UBERON:0000073!2.18e-15!94;UBERON:0001016!2.18e-15!94;UBERON:0000956!1.86e-14!25;UBERON:0000203!1.86e-14!25;UBERON:0000033!8.33e-14!123;UBERON:0000153!1.38e-13!129;UBERON:0007811!1.38e-13!129;UBERON:0002346!1.49e-13!90;UBERON:0003075!1.95e-13!86;UBERON:0007284!1.95e-13!86;UBERON:0002420!2.98e-13!9;UBERON:0007245!2.98e-13!9;UBERON:0010009!2.98e-13!9;UBERON:0010011!2.98e-13!9;UBERON:0000454!2.98e-13!9;UBERON:0002308!5.52e-13!9;UBERON:0000125!5.52e-13!9;UBERON:0009663!7.43e-13!7;UBERON:0007023!1.17e-12!115;UBERON:0000369!9.89e-11!4;UBERON:0002435!9.89e-11!4;UBERON:0000204!9.89e-11!4;UBERON:0010082!9.89e-11!4;UBERON:0000200!3.42e-10!6;UBERON:0000924!1.02e-09!173;UBERON:0006601!1.02e-09!173;UBERON:0004121!1.72e-09!169;UBERON:0005383!1.77e-08!3;UBERON:0005382!1.77e-08!3;UBERON:0002771!2.30e-08!3;UBERON:0001871!1.38e-07!7;UBERON:0000025!2.12e-07!194;UBERON:0000475!4.30e-07!365;UBERON:0004111!4.73e-07!241 | |ontology_enrichment_uberon=UBERON:0001869!8.39e-27!32;UBERON:0002780!1.09e-26!41;UBERON:0001890!1.09e-26!41;UBERON:0006240!1.09e-26!41;UBERON:0003080!6.81e-26!42;UBERON:0001893!6.76e-25!34;UBERON:0002020!7.78e-25!34;UBERON:0003528!7.78e-25!34;UBERON:0002791!3.36e-23!33;UBERON:0001049!1.55e-20!57;UBERON:0005068!1.55e-20!57;UBERON:0006241!1.55e-20!57;UBERON:0007135!1.55e-20!57;UBERON:0002616!1.37e-19!59;UBERON:0000955!1.51e-19!69;UBERON:0006238!1.51e-19!69;UBERON:0003056!3.35e-17!61;UBERON:0002619!7.58e-17!22;UBERON:0001017!1.38e-16!82;UBERON:0001950!5.16e-16!20;UBERON:0005743!1.94e-15!86;UBERON:0000073!2.18e-15!94;UBERON:0001016!2.18e-15!94;UBERON:0000956!1.86e-14!25;UBERON:0000203!1.86e-14!25;UBERON:0000033!8.33e-14!123;UBERON:0000153!1.38e-13!129;UBERON:0007811!1.38e-13!129;UBERON:0002346!1.49e-13!90;UBERON:0003075!1.95e-13!86;UBERON:0007284!1.95e-13!86;UBERON:0002420!2.98e-13!9;UBERON:0007245!2.98e-13!9;UBERON:0010009!2.98e-13!9;UBERON:0010011!2.98e-13!9;UBERON:0000454!2.98e-13!9;UBERON:0002308!5.52e-13!9;UBERON:0000125!5.52e-13!9;UBERON:0009663!7.43e-13!7;UBERON:0007023!1.17e-12!115;UBERON:0000369!9.89e-11!4;UBERON:0002435!9.89e-11!4;UBERON:0000204!9.89e-11!4;UBERON:0010082!9.89e-11!4;UBERON:0000200!3.42e-10!6;UBERON:0000924!1.02e-09!173;UBERON:0006601!1.02e-09!173;UBERON:0004121!1.72e-09!169;UBERON:0005383!1.77e-08!3;UBERON:0005382!1.77e-08!3;UBERON:0002771!2.30e-08!3;UBERON:0001871!1.38e-07!7;UBERON:0000025!2.12e-07!194;UBERON:0000475!4.30e-07!365;UBERON:0004111!4.73e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0002420;5.15e-78;9!UBERON:0007245;5.15e-78;9!UBERON:0010009;5.15e-78;9!UBERON:0010011;5.15e-78;9!UBERON:0000454;5.15e-78;9!UBERON:0009663;1.55e-64;7!UBERON:0000369;7.66e-64;4!UBERON:0002435;7.66e-64;4!UBERON:0000204;7.66e-64;4!UBERON:0000125;2.19e-50;9!UBERON:0002308;2.19e-50;9!UBERON:0005383;1.23e-38;3!UBERON:0005382;1.23e-38;3!UBERON:0002791;5.51e-31;32!UBERON:0001882;2.37e-29;1!UBERON:0001874;2.37e-29;1!UBERON:0005403;2.37e-29;1!UBERON:0001869;3.81e-29;32!UBERON:0003528;1.85e-26;34!UBERON:0002020;1.85e-26;34!UBERON:0001893;2.86e-25;34!UBERON:0000349;1.81e-23;5!UBERON:0002780;1.91e-21;41!UBERON:0001890;1.91e-21;41!UBERON:0001873;1.15e-15;2!UBERON:0002702;1.33e-15;2!UBERON:0001876;2.05e-15;2!UBERON:0001875;2.05e-15;2!UBERON:0006514;2.05e-15;2!UBERON:0000073;4.45e-13;53!UBERON:0002616;4.45e-13;53!UBERON:0000955;7.15e-11;68!UBERON:0001870;7.42e-11;3!UBERON:0001017;3.00e-09;75!UBERON:0001016;4.75e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,6.05e-78,9;UBERON:0007245,6.05e-78,9;UBERON:0010009,6.05e-78,9;UBERON:0010011,6.05e-78,9;UBERON:0000454,6.05e-78,9;UBERON:0009663,2.54e-64,7;UBERON:0000369,1.46e-63,4;UBERON:0002435,1.46e-63,4;UBERON:0000204,1.46e-63,4;UBERON:0010082,1.46e-63,4;UBERON:0000125,3.21e-50,9;UBERON:0002308,3.21e-50,9;UBERON:0005383,1.49e-38,3;UBERON:0005382,1.49e-38,3;UBERON:0002791,5.71e-31,32;UBERON:0001869,5.71e-31,32;UBERON:0001874,3.16e-29,1;UBERON:0003528,3.16e-29,34;UBERON:0002020,3.16e-29,34;UBERON:0001893,3.16e-29,34;UBERON:0001882,4.20e-29,1;UBERON:0005403,4.20e-29,1;UBERON:0002780,1.99e-24,41;UBERON:0001890,1.99e-24,41;UBERON:0003080,1.99e-24,41;UBERON:0006240,1.99e-24,41;UBERON:0000349,1.81e-23,5;UBERON:0000073,4.39e-19,53;UBERON:0002616,4.39e-19,53;UBERON:0001049,4.26e-18,56;UBERON:0005068,4.26e-18,56;UBERON:0006241,4.26e-18,56;UBERON:0007135,4.26e-18,56;UBERON:0003056,1.15e-16,61;UBERON:0001873,1.15e-15,2;UBERON:0010122,1.15e-15,2;UBERON:0002702,1.33e-15,2;UBERON:0001876,1.54e-15,2;UBERON:0001875,2.05e-15,2;UBERON:0006514,2.05e-15,2;UBERON:0000955,8.54e-15,68;UBERON:0006238,8.54e-15,68;UBERON:0001017,1.61e-12,81;UBERON:0003075,1.61e-12,82;UBERON:0007284,1.61e-12,82;UBERON:0002346,5.91e-12,86;UBERON:0001016,2.56e-11,89;UBERON:0001870,7.42e-11,3;UBERON:0010371,6.10e-10,104;UBERON:0010314,7.02e-08,132;UBERON:0000025,2.32e-07,192 | |||
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|short_description=p25@R3HDM2 | |short_description=p25@R3HDM2 | ||
}} | }} |
Latest revision as of 14:02, 19 September 2015
Short description: | p25@R3HDM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_R3HDM2_5end |
Coexpression cluster: | C2222_caudate_globus_thalamus_medial_amygdala_putamen_parietal |
Association with transcript: | -233bp_to_uc009zpn.1_5end |
EntrezGene: | R3HDM2 |
HGNC: | 29167 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data