FFCP PHASE1:Hg19::chr10:81320211..81320219,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=653509,729238 | |EntrezGene=653509,729238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10798,10799 | |HGNC=10798,10799 | ||
|TSSclassifier=strong | |||
|UniProt=E3VLC8,Q8IWL1 | |UniProt=E3VLC8,Q8IWL1 | ||
|association_with_transcript=-48bp_to_ENST00000486566,ENST00000491208,NM_001098668,uc001kal.3,uc001kam.2,uc001kan.3_5end | |association_with_transcript=-48bp_to_ENST00000486566,ENST00000491208,NM_001098668,uc001kal.3,uc001kam.2,uc001kan.3_5end | ||
|cluster_id=chr10:81320211..81320219,- | |||
|coexpression_cluster_id=C95 | |coexpression_cluster_id=C95 | ||
|description=CAGE_peak_2_at_SFTPA1_5end,CAGE_peak_2_at_SFTPA2_5end | |description=CAGE_peak_2_at_SFTPA1_5end,CAGE_peak_2_at_SFTPA2_5end | ||
|id=chr10:81320211..81320219,- | |id=chr10:81320211..81320219,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.37e-15;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.52e-09;29!UBERON:0001041;3.01e-09;30 | |||
|ontology_enrichment_disease=DOID:0050619!1.97e-11!1;DOID:1357!1.97e-11!1 | |ontology_enrichment_disease=DOID:0050619!1.97e-11!1;DOID:1357!1.97e-11!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!5.20e-21!2;UBERON:0002171!8.62e-12!1;UBERON:0006518!8.62e-12!1;UBERON:0008949!8.62e-12!1;UBERON:0000101!8.62e-12!1;UBERON:0002167!8.62e-12!1;UBERON:0001764!1.97e-11!1;UBERON:0001825!1.97e-11!1;UBERON:0001736!2.18e-11!1;UBERON:0006298!2.18e-11!1;UBERON:0002372!6.00e-11!1;UBERON:0001961!6.00e-11!1;UBERON:0001744!6.00e-11!1;UBERON:0001735!6.00e-11!1;UBERON:0001004!5.29e-08!72;UBERON:0005178!2.16e-07!34;UBERON:0002224!2.16e-07!34;UBERON:0005181!3.55e-07!35 | |ontology_enrichment_uberon=UBERON:0003127!5.20e-21!2;UBERON:0002171!8.62e-12!1;UBERON:0006518!8.62e-12!1;UBERON:0008949!8.62e-12!1;UBERON:0000101!8.62e-12!1;UBERON:0002167!8.62e-12!1;UBERON:0001764!1.97e-11!1;UBERON:0001825!1.97e-11!1;UBERON:0001736!2.18e-11!1;UBERON:0006298!2.18e-11!1;UBERON:0002372!6.00e-11!1;UBERON:0001961!6.00e-11!1;UBERON:0001744!6.00e-11!1;UBERON:0001735!6.00e-11!1;UBERON:0001004!5.29e-08!72;UBERON:0005178!2.16e-07!34;UBERON:0002224!2.16e-07!34;UBERON:0005181!3.55e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;7.48e-30;1!UBERON:0006518;7.48e-30;1!UBERON:0008949;7.48e-30;1!UBERON:0000101;7.48e-30;1!UBERON:0002167;7.48e-30;1!UBERON:0002048;2.35e-12;22!UBERON:0000117;2.35e-12;22!UBERON:0000171;2.35e-12;22!UBERON:0000170;2.35e-12;22!UBERON:0005178;1.95e-07;34!UBERON:0002224;1.95e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,7.48e-30,1;UBERON:0006518,7.48e-30,1;UBERON:0008949,7.48e-30,1;UBERON:0000101,7.48e-30,1;UBERON:0002167,7.48e-30,1;UBERON:0002048,2.26e-12,22;UBERON:0000117,2.26e-12,22;UBERON:0000171,2.26e-12,22;UBERON:0000170,2.26e-12,22;UBERON:0005597,2.26e-12,22;UBERON:0000118,2.26e-12,22;UBERON:0005178,3.01e-08,34;UBERON:0002224,3.01e-08,34;UBERON:0005181,4.96e-08,35;UBERON:0005153,1.25e-07,37;UBERON:0008947,1.90e-07,38;UBERON:0003258,1.90e-07,38 | |||
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|short_description=p2@SFTPA1,p2@SFTPA2 | |short_description=p2@SFTPA1,p2@SFTPA2 | ||
}} | }} |
Latest revision as of 14:22, 19 September 2015
Short description: | p2@SFTPA1, p2@SFTPA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFTPA1_5end, CAGE_peak_2_at_SFTPA2_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -48bp_to_ENST00000486566, ENST00000491208, NM_001098668, uc001kal.3, uc001kam.2, uc001kan.3_5end |
EntrezGene: | 653509,729238 |
HGNC: | 10799&submit=Submit 10798, 10799 |
UniProt: | E3VLC8Q8IWL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 7.48e-30 | 1 |
right lung lobe | 7.48e-30 | 1 |
lower lobe of lung | 7.48e-30 | 1 |
lobe of lung | 7.48e-30 | 1 |
right lung | 7.48e-30 | 1 |
lung | 2.26e-12 | 22 |
respiratory tube | 2.26e-12 | 22 |
respiration organ | 2.26e-12 | 22 |
pair of lungs | 2.26e-12 | 22 |
lung primordium | 2.26e-12 | 22 |
lung bud | 2.26e-12 | 22 |
thoracic cavity element | 3.01e-08 | 34 |
thoracic cavity | 3.01e-08 | 34 |
thoracic segment organ | 4.96e-08 | 35 |
epithelial bud | 1.25e-07 | 37 |
respiratory primordium | 1.90e-07 | 38 |
endoderm of foregut | 1.90e-07 | 38 |