FFCP PHASE1:Hg19::chr19:52004986..52004997,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89858 | |EntrezGene=89858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15482 | |HGNC=15482 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PQ1 | |UniProt=Q96PQ1 | ||
|association_with_transcript=45bp_to_ENST00000291707,NM_053003,uc002pwx.1,uc010eoy.1_5end | |||
|cluster_id=chr19:52004986..52004997,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_SIGLEC12_5end | |||
|id=chr19:52004986..52004997,- | |||
|ontology_enrichment_celltype=CL:0002057!1.82e-45!42;CL:0000860!6.57e-42!45;CL:0000763!8.35e-38!112;CL:0000049!8.35e-38!112;CL:0002194!1.36e-31!63;CL:0000576!1.36e-31!63;CL:0000040!1.36e-31!63;CL:0000559!1.36e-31!63;CL:0002009!2.18e-30!65;CL:0000839!9.49e-30!70;CL:0000557!3.22e-29!71;CL:0000766!8.95e-27!76;CL:0000037!1.73e-24!172;CL:0000566!1.73e-24!172;CL:0002032!2.42e-23!165;CL:0000837!2.42e-23!165;CL:0000988!1.69e-22!182;CL:0002087!1.24e-16!119;CL:0002031!1.79e-14!124;CL:0000738!6.11e-14!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.06e-35;33!CL:0002057;8.06e-35;33!CL:0000473;4.99e-24;39!CL:0000234;4.99e-24;39!CL:0000576;2.02e-17;48!CL:0000763;5.98e-14;100!CL:0000766;2.13e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.89e-29,42;CL:0002057,5.89e-29,42;CL:0000473,3.76e-25,48;CL:0000234,3.76e-25,48;CL:0000763,1.73e-22,108;CL:0000049,1.73e-22,108;CL:0002194,8.08e-20,59;CL:0000576,8.08e-20,59;CL:0000040,8.08e-20,59;CL:0000559,8.08e-20,59;CL:0002009,3.95e-19,61;CL:0000839,1.38e-17,66;CL:0000557,2.63e-17,67;CL:0000766,5.16e-16,72;CL:0002032,2.19e-14,161;CL:0000837,2.19e-14,161;CL:0000037,1.08e-13,168;CL:0000988,6.97e-13,177;CL:0002087,1.74e-09,115;CL:0002031,5.02e-09,120;CL:0000738,8.82e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;6.65e-21;42!CL:0000049;3.12e-12;108!UBERON:0004872;8.10e-07;7 | |||
|ontology_enrichment_disease=DOID:8692!3.39e-13!31;DOID:1240!1.90e-11!39;DOID:2531!5.48e-08!51;DOID:0060083!5.48e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.67e-12;8!DOID:8692;5.09e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.57e-12,8;DOID:8692,2.60e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.05e-31!102;UBERON:0003061!3.05e-31!102;UBERON:0002193!2.37e-29!112;UBERON:0002371!4.87e-25!80;UBERON:0002405!5.43e-25!115;UBERON:0001474!9.72e-23!86;UBERON:0004765!3.43e-18!101;UBERON:0001434!3.43e-18!101;UBERON:0003081!1.92e-10!216;UBERON:0004177!5.89e-10!7;UBERON:0002204!9.01e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.97e-15;3!UBERON:0004177;3.30e-09;5!UBERON:0005057;3.30e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,4.45e-17,93;UBERON:0002390,4.05e-16,98;UBERON:0003061,4.05e-16,98;UBERON:0002371,4.23e-15,76;UBERON:0002106,9.30e-15,3;UBERON:0004854,9.30e-15,3;UBERON:0009034,9.30e-15,3;UBERON:0002095,9.30e-15,3;UBERON:0004782,9.30e-15,3;UBERON:0003281,9.30e-15,3;UBERON:0009664,9.30e-15,3;UBERON:0002296,9.30e-15,3;UBERON:0005602,9.30e-15,3;UBERON:0001179,9.30e-15,3;UBERON:0006293,9.30e-15,3;UBERON:0002193,1.83e-14,108;UBERON:0001474,6.79e-14,82;UBERON:0004765,1.56e-12,90;UBERON:0001434,3.91e-11,100;UBERON:0004177,7.86e-07,7;UBERON:0005057,7.86e-07,7;UBERON:0003081,8.44e-07,203 | |||
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| ||
|short_description=p2@SIGLEC12 | |||
}} | }} |
Latest revision as of 15:07, 19 September 2015
Short description: | p2@SIGLEC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIGLEC12_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 45bp_to_ENST00000291707, NM_053003, uc002pwx.1, uc010eoy.1_5end |
EntrezGene: | SIGLEC12 |
HGNC: | 15482 |
UniProt: | Q96PQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.89e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.89e-29 | 42 |
defensive cell | 3.76e-25 | 48 |
phagocyte | 3.76e-25 | 48 |
myeloid cell | 1.73e-22 | 108 |
common myeloid progenitor | 1.73e-22 | 108 |
monopoietic cell | 8.08e-20 | 59 |
monocyte | 8.08e-20 | 59 |
monoblast | 8.08e-20 | 59 |
promonocyte | 8.08e-20 | 59 |
macrophage dendritic cell progenitor | 3.95e-19 | 61 |
myeloid lineage restricted progenitor cell | 1.38e-17 | 66 |
granulocyte monocyte progenitor cell | 2.63e-17 | 67 |
myeloid leukocyte | 5.16e-16 | 72 |
hematopoietic oligopotent progenitor cell | 2.19e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.19e-14 | 161 |
hematopoietic stem cell | 1.08e-13 | 168 |
hematopoietic cell | 6.97e-13 | 177 |
nongranular leukocyte | 1.74e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 5.02e-09 | 120 |
leukocyte | 8.82e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
immune system | 4.45e-17 | 93 |
hematopoietic system | 4.05e-16 | 98 |
blood island | 4.05e-16 | 98 |
bone marrow | 4.23e-15 | 76 |
spleen | 9.30e-15 | 3 |
gastrointestinal system mesentery | 9.30e-15 | 3 |
stomach region | 9.30e-15 | 3 |
mesentery | 9.30e-15 | 3 |
gastrointestinal system serosa | 9.30e-15 | 3 |
mesentery of stomach | 9.30e-15 | 3 |
gut mesentery | 9.30e-15 | 3 |
dorsal mesentery | 9.30e-15 | 3 |
dorsal mesogastrium | 9.30e-15 | 3 |
peritoneal cavity | 9.30e-15 | 3 |
spleen primordium | 9.30e-15 | 3 |
hemolymphoid system | 1.83e-14 | 108 |
bone element | 6.79e-14 | 82 |
skeletal element | 1.56e-12 | 90 |
skeletal system | 3.91e-11 | 100 |
hemopoietic organ | 7.86e-07 | 7 |
immune organ | 7.86e-07 | 7 |
lateral plate mesoderm | 8.44e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.57e-12 | 8 |
myeloid leukemia | 2.60e-08 | 31 |