FFCP PHASE1:Hg19::chr11:66367106..66367110,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9973 | |EntrezGene=9973 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1613 | |HGNC=1613 | ||
|TSSclassifier=strong | |||
|UniProt=E9PP76 | |UniProt=E9PP76 | ||
|association_with_transcript=-394bp_to_ENST00000534763_5end | |association_with_transcript=-394bp_to_ENST00000534763_5end | ||
|cluster_id=chr11:66367106..66367110,+ | |||
|coexpression_cluster_id=C1002 | |||
|description=CAGE_peak_4_at_CCS_5end | |description=CAGE_peak_4_at_CCS_5end | ||
|id=chr11:66367106..66367110,+ | |id=chr11:66367106..66367110,+ | ||
|ontology_enrichment_celltype=CL:0000003!3.97e-12!722;CL:0000183!6.86e-12!59;CL:0000055!2.05e-11!180;CL:0000680!6.86e-11!57;CL:0000056!6.86e-11!57;CL:0000355!6.86e-11!57;CL:0000187!7.55e-11!54;CL:0000393!1.98e-10!60;CL:0000211!1.98e-10!60;CL:0002371!4.85e-10!591;CL:0000548!2.49e-09!679;CL:0000004!2.49e-09!679;CL:0000255!2.49e-09!679;CL:0000012!2.99e-09!682;CL:0000144!1.89e-08!625;CL:0000192!5.51e-08!42;CL:0000514!5.51e-08!42;CL:0000220!1.76e-07!246;CL:0002321!2.16e-07!248 | |ontology_enrichment_celltype=CL:0000003!3.97e-12!722;CL:0000183!6.86e-12!59;CL:0000055!2.05e-11!180;CL:0000680!6.86e-11!57;CL:0000056!6.86e-11!57;CL:0000355!6.86e-11!57;CL:0000187!7.55e-11!54;CL:0000393!1.98e-10!60;CL:0000211!1.98e-10!60;CL:0002371!4.85e-10!591;CL:0000548!2.49e-09!679;CL:0000004!2.49e-09!679;CL:0000255!2.49e-09!679;CL:0000012!2.99e-09!682;CL:0000144!1.89e-08!625;CL:0000192!5.51e-08!42;CL:0000514!5.51e-08!42;CL:0000220!1.76e-07!246;CL:0002321!2.16e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.80e-07;2!CL:0000558;1.80e-07;2!CL:0002596;7.26e-07;2!CL:0000393;7.79e-07;61!CL:0000211;7.79e-07;61!CL:0000187;8.37e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,8.77e-11,55;CL:0000680,5.15e-10,58;CL:0000056,5.15e-10,58;CL:0000355,5.15e-10,58;CL:0000393,2.53e-09,61;CL:0000211,2.53e-09,61;CL:0000192,2.19e-08,43;CL:0000514,2.19e-08,43;CL:0000764,1.84e-07,2;CL:0000765,1.84e-07,2;CL:0000050,1.84e-07,2;CL:0000038,1.84e-07,2;CL:0000558,1.84e-07,2;CL:0000547,1.84e-07,2;CL:0000549,1.84e-07,2;CL:0000550,1.84e-07,2;CL:0000552,1.84e-07,2;CL:0002596,7.10e-07,2;CL:0002600,7.31e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000355;2.56e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.43e-11!110;UBERON:0001009!1.20e-10!113;UBERON:0000486!3.82e-10!82;UBERON:0000490!7.67e-10!138;UBERON:0004290!8.66e-10!70;UBERON:0001134!1.33e-09!61;UBERON:0002036!1.33e-09!61;UBERON:0003082!1.33e-09!61;UBERON:0000914!4.30e-09!83;UBERON:0002329!4.30e-09!83;UBERON:0003077!4.30e-09!83;UBERON:0003059!4.30e-09!83;UBERON:0007282!4.30e-09!83;UBERON:0009618!4.30e-09!83;UBERON:0007285!4.30e-09!83;UBERON:0002385!7.94e-09!63;UBERON:0001015!7.94e-09!63;UBERON:0000383!7.94e-09!63;UBERON:0005256!8.46e-09!143;UBERON:0002100!3.19e-07!216;UBERON:0003104!9.07e-07!238;UBERON:0009142!9.07e-07!238 | |ontology_enrichment_uberon=UBERON:0004535!1.43e-11!110;UBERON:0001009!1.20e-10!113;UBERON:0000486!3.82e-10!82;UBERON:0000490!7.67e-10!138;UBERON:0004290!8.66e-10!70;UBERON:0001134!1.33e-09!61;UBERON:0002036!1.33e-09!61;UBERON:0003082!1.33e-09!61;UBERON:0000914!4.30e-09!83;UBERON:0002329!4.30e-09!83;UBERON:0003077!4.30e-09!83;UBERON:0003059!4.30e-09!83;UBERON:0007282!4.30e-09!83;UBERON:0009618!4.30e-09!83;UBERON:0007285!4.30e-09!83;UBERON:0002385!7.94e-09!63;UBERON:0001015!7.94e-09!63;UBERON:0000383!7.94e-09!63;UBERON:0005256!8.46e-09!143;UBERON:0002100!3.19e-07!216;UBERON:0003104!9.07e-07!238;UBERON:0009142!9.07e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.45e-16;15!UBERON:0000179;7.45e-16;15!UBERON:0000463;7.45e-16;15!UBERON:0002390;2.34e-07;32!UBERON:0005396;7.26e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.09e-16,15;UBERON:0000179,7.09e-16,15;UBERON:0000463,7.09e-16,15;UBERON:0004535,1.46e-12,109;UBERON:0001009,4.87e-12,112;UBERON:0007503,1.88e-09,78;UBERON:0001134,4.14e-09,62;UBERON:0002036,4.14e-09,62;UBERON:0003082,4.14e-09,62;UBERON:0002385,1.06e-08,64;UBERON:0001015,1.06e-08,64;UBERON:0000383,1.06e-08,64;UBERON:0002329,1.70e-08,71;UBERON:0003059,1.70e-08,71;UBERON:0007282,1.70e-08,71;UBERON:0004290,1.70e-08,71;UBERON:0009618,1.70e-08,71;UBERON:0003077,2.55e-08,72;UBERON:0007285,2.55e-08,72;UBERON:0007524,3.77e-08,73;UBERON:0005396,7.10e-07,2;UBERON:0003104,9.41e-07,160;UBERON:0009142,9.41e-07,160;UBERON:0004573,9.82e-07,33;UBERON:0004571,9.82e-07,33 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0.737201809504527,0,0.436882744260345,0.263766978228454,1.60896258848061,0.331397375727916,0,0,0,0.487932798790507,1.96993692922861,0,0,2.0036519099174,0.410623275218653,0.125542639594803,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0.919421224478927,0,0,1.16200800870452,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,1.55974639639243,0.589211814949674,0.443067789167242,0.270803863765016,0.25618263945135,0,0.164437904603676,0,0.869409257205157,0,0,0,0.679856056185397,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,0,1.50401373190767,0.289693037921647,0,0,1.13441780596881,0.221729397462564,0.351339142772504,0.327447688744282,2.91436230634034,0.741568885568859,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,1.59009925893364,0,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0.760272105718513,0,0.367663080345869,1.62028389576352,0.357198913136319,0.22452937262617,0.112611480483322,0,1.89853131913626,0.366403487860815,0,0,1.74437620857014,0,0.12663051166458,0.132409180813219,0,0,1.68203280042692,2.1349799145941,0.24666754841716,0.622422070799533,0.134710672069688,0,1.05950199351452,1.15235184896,0.70296429550139,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0.280901613404497,1.02077085627447,0.122834317311768,0.516628905878827,0,0,1.82032272387605,0,1.68336113954066,0.125118519871964,0.554128230968366,0,0,0,0.340296549480063,0,0.427114777637135,0.423863802319124,0,0.515262646192195,0,0.930584281657949,0,0.584622030967192,0.252433774244115,0.644349290496095,1.2931684545505,0,0.403008392910561,0.847802961552438,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0,0,0.71181185733329,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.441463099414651,0,0.686271241194102,0,0,0.100528972411631,0.925884451585296,0.325808305310325,0,0,1.15930404975077,0.70445216541493,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.283550194484773,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,2.34434894420094,0,0,0,0,0.448524337381443,0,0.80672114403045,0.258543431515556,17.8828222925941,0,0.531876233169741,0,1.28603687131071,0,0.266422179016099,0.57191197463259,4.34097284313154,0.823240336780769,0,1.42156779497018,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0.224170287987055,0,0,0,0.76228387266739,0,0,0,0,0,0,0,1.71768088406796,0,0,0,0.178428988797162,0.157702415033935,0,0,0,4.1389228517002,0.664225598535437,0.368738337083406,0.260650843404249,1.56640925970192,0,0.206768026122887,0,0,0.303127571446259,1.66435439510497,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0.177561725313127,0.9033987161519,0,0.232420756919918,0.725156697549733,0,0.0920809889358963,0.918515585316854,0,0.131124414959424,1.80479845162965,0.539107359730903,3.13739907670742,0,0.949964660035881,0,0.170093705276516,0.431831832204279,1.54227252690289,1.62567862526312,0.501689773854853,1.52925763827023,0,0.671624264166535,5.7007567927943,8.36593443279682,0.512900250232778,0.656029291399411,0.650756789328606,0.103041011647722,0,0,0.574265537996172,0,0,1.83674364755032,0.154048617114644,0.767518373630648,0.413509717453592,1.07420244868274,0.435050081742686,0.255679882248303,1.24644849905432,0.495854746082934,0,0,0,0,0,1.3940745403212,2.15623506123262,1.59691809095107,4.34966496037536,0.74129687641568,0.143124886741991,0.744316738719335,0.316379424718726,0.38126038784765,1.79128453917934,0,4.13664222303718,1.56989728039846,1.2591072030832,0,0.353437207037059,0.808729926293264,0,0.421258456238981,0.975267478179181,0.243713489631284,1.05650146756755,0.136499911407986,0,0,4.41092274836899,0,0.438450885253763,1.73632660280006,1.9676842561399,0,0.92947049429925,0,0.860468113224309,0.392996164052485,0.35667105148125,3.54761064070598,0.211107635297664,0,0.379473173765715,0,0.962221127255121,0,1.08890984861323,0,0.43050537267123,0,0.443430153536676,0.229723400206959,10.6563997938756,29.0562138714103,3.98753031021914,5.71756261098694,11.1067813733272,9.07862635669804,12.4207230564766,7.13812658664843,0,0,0.245040215981032,0.371606350251437,0.865615277858669,0.142283686696828,0.318852545457645,0,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0.447352215784832,0,0,0,0,0.270455678475983,0,0,0,0,0,0.334330152832435,0,0,0.296964680832639,0,0,0,0.890469640183247,0.16480387422676,0,0.19924798825107,0,0,0.102268682502155,0.246169610922139,0,0.359473404589307,0,0,0,4.7896618469388,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0.2363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| ||
|short_description=p4@CCS | |short_description=p4@CCS | ||
}} | }} |
Latest revision as of 15:12, 19 September 2015
Short description: | p4@CCS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCS_5end |
Coexpression cluster: | C1002_Mesenchymal_Whole_Smooth_Renal_osteosarcoma_Fibroblast_Reticulocytes |
Association with transcript: | -394bp_to_ENST00000534763_5end |
EntrezGene: | CCS |
HGNC: | 1613 |
UniProt: | E9PP76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 8.77e-11 | 55 |
muscle precursor cell | 5.15e-10 | 58 |
myoblast | 5.15e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.15e-10 | 58 |
electrically responsive cell | 2.53e-09 | 61 |
electrically active cell | 2.53e-09 | 61 |
smooth muscle cell | 2.19e-08 | 43 |
smooth muscle myoblast | 2.19e-08 | 43 |
erythroid lineage cell | 1.84e-07 | 2 |
erythroblast | 1.84e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 1.84e-07 | 2 |
erythroid progenitor cell | 1.84e-07 | 2 |
reticulocyte | 1.84e-07 | 2 |
proerythroblast | 1.84e-07 | 2 |
basophilic erythroblast | 1.84e-07 | 2 |
polychromatophilic erythroblast | 1.84e-07 | 2 |
orthochromatic erythroblast | 1.84e-07 | 2 |
smooth muscle cell of the carotid artery | 7.10e-07 | 2 |
smooth muscle cell of trachea | 7.31e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 7.09e-16 | 15 |
haemolymphatic fluid | 7.09e-16 | 15 |
organism substance | 7.09e-16 | 15 |
cardiovascular system | 1.46e-12 | 109 |
circulatory system | 4.87e-12 | 112 |
epithelial vesicle | 1.88e-09 | 78 |
skeletal muscle tissue | 4.14e-09 | 62 |
striated muscle tissue | 4.14e-09 | 62 |
myotome | 4.14e-09 | 62 |
muscle tissue | 1.06e-08 | 64 |
musculature | 1.06e-08 | 64 |
musculature of body | 1.06e-08 | 64 |
somite | 1.70e-08 | 71 |
presomitic mesoderm | 1.70e-08 | 71 |
presumptive segmental plate | 1.70e-08 | 71 |
dermomyotome | 1.70e-08 | 71 |
trunk paraxial mesoderm | 1.70e-08 | 71 |
paraxial mesoderm | 2.55e-08 | 72 |
presumptive paraxial mesoderm | 2.55e-08 | 72 |
dense mesenchyme tissue | 3.77e-08 | 73 |
carotid artery segment | 7.10e-07 | 2 |
mesenchyme | 9.41e-07 | 160 |
entire embryonic mesenchyme | 9.41e-07 | 160 |
systemic artery | 9.82e-07 | 33 |
systemic arterial system | 9.82e-07 | 33 |