FFCP PHASE1:Hg19::chr10:82214045..82214050,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:82214045..82214050,+
|short_description=p6@TSPAN14
|description=CAGE_peak_6_at_TSPAN14_5end
|association_with_transcript=7bp_to_NM_001128309,NM_030927,uc0...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81619 | |EntrezGene=81619 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23303 | |HGNC=23303 | ||
|UniProt=B4DHY6, | |TSSclassifier=strong | ||
|UniProt=B4DHY6,Q8NG11 | |||
|association_with_transcript=7bp_to_NM_001128309,NM_030927,uc001kci.3,uc001kcj.3,uc009xss.2_5end | |||
|cluster_id=chr10:82214045..82214050,+ | |||
|description=CAGE_peak_6_at_TSPAN14_5end | |||
|id=chr10:82214045..82214050,+ | |||
|ontology_enrichment_celltype=CL:0002371!4.41e-09!591;CL:0000220!5.03e-09!246;CL:0002321!6.66e-09!248;CL:0000144!8.48e-08!625;CL:0000066!1.44e-07!254;CL:0000548!3.19e-07!679;CL:0000004!3.19e-07!679;CL:0000255!3.19e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:1000449;7.50e-10;15!CL:1000507;8.72e-09;10!CL:1000494;8.72e-09;10!CL:1000497;2.49e-08;17!CL:0002518;2.49e-08;17!CL:0000115;2.96e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,7.81e-10,15;CL:1000507,6.66e-09,10;CL:1000494,6.66e-09,10;CL:0002078,1.46e-08,45;CL:1000497,2.56e-08,17;CL:0002518,2.56e-08,17;CL:0000115,3.37e-08,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003887!8.29e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;7.50e-10;15!UBERON:0004819;7.50e-10;15!UBERON:0001285;7.50e-10;15!UBERON:0007684;7.50e-10;15!UBERON:0010371;8.41e-09;31!UBERON:0004211;8.72e-09;10!UBERON:0009773;8.72e-09;10!UBERON:0001231;8.72e-09;10!UBERON:0004810;8.72e-09;10!UBERON:0000353;2.78e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,1.22e-10,16;UBERON:0004819,1.22e-10,16;UBERON:0004211,7.81e-10,15;UBERON:0009773,7.81e-10,15;UBERON:0001231,7.81e-10,15;UBERON:0001285,7.81e-10,15;UBERON:0007684,7.81e-10,15;UBERON:0004208,7.81e-10,15;UBERON:0004810,6.66e-09,10;UBERON:0000353,3.76e-08,15;UBERON:0000119,2.93e-07,309;UBERON:0007625,3.09e-07,11;UBERON:0001444,8.66e-07,49 | |||
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| ||
|short_description=p6@TSPAN14 | |||
}} | }} |
Latest revision as of 15:37, 19 September 2015
Short description: | p6@TSPAN14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TSPAN14_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_NM_001128309, NM_030927, uc001kci.3, uc001kcj.3, uc009xss.2_5end |
EntrezGene: | TSPAN14 |
HGNC: | 23303 |
UniProt: | B4DHY6Q8NG11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 7.81e-10 | 15 |
kidney tubule cell | 6.66e-09 | 10 |
nephron tubule epithelial cell | 6.66e-09 | 10 |
meso-epithelial cell | 1.46e-08 | 45 |
kidney cell | 2.56e-08 | 17 |
kidney epithelial cell | 2.56e-08 | 17 |
endothelial cell | 3.37e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
excretory tube | 1.22e-10 | 16 |
kidney epithelium | 1.22e-10 | 16 |
nephron epithelium | 7.81e-10 | 15 |
renal tubule | 7.81e-10 | 15 |
nephron tubule | 7.81e-10 | 15 |
nephron | 7.81e-10 | 15 |
uriniferous tubule | 7.81e-10 | 15 |
nephrogenic mesenchyme | 7.81e-10 | 15 |
nephron tubule epithelium | 6.66e-09 | 10 |
parenchyma | 3.76e-08 | 15 |
cell layer | 2.93e-07 | 309 |
pigment epithelium of eye | 3.09e-07 | 11 |
subdivision of head | 8.66e-07 | 49 |