FFCP PHASE1:Hg19::chr7:79999026..79999038,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=948 | |EntrezGene=948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1663 | |HGNC=1663 | ||
|TSSclassifier=strong | |||
|UniProt=P16671 | |UniProt=P16671 | ||
|association_with_transcript=135bp_to_ENST00000435819,uc003uhc.2_5end | |association_with_transcript=135bp_to_ENST00000435819,uc003uhc.2_5end | ||
|cluster_id=chr7:79999026..79999038,+ | |||
|coexpression_cluster_id=C557 | |coexpression_cluster_id=C557 | ||
|description=CAGE_peak_31_at_CD36_5end | |description=CAGE_peak_31_at_CD36_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002144!3.78e-22!3;CL:0005020!1.70e-19!6;CL:0002138!1.70e-19!6;CL:0005022!1.70e-19!6;CL:0002139!7.19e-14!24;CL:0000115!3.07e-09!35;CL:0002078!3.59e-07!44 | |ontology_enrichment_celltype=CL:0002144!3.78e-22!3;CL:0005020!1.70e-19!6;CL:0002138!1.70e-19!6;CL:0005022!1.70e-19!6;CL:0002139!7.19e-14!24;CL:0000115!3.07e-09!35;CL:0002078!3.59e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002138;1.17e-33;6!CL:0002139;2.20e-19;24!CL:0002144;7.35e-18;3!CL:0002078;6.61e-10;45!CL:0000138;1.27e-09;6!CL:0000115;2.76e-08;36!CL:0000213;1.85e-07;58!CL:0000215;1.85e-07;58!CL:0000153;7.69e-07;9!CL:0000447;7.69e-07;9 | |ontology_enrichment_celltype_v019=CL:0002138;1.17e-33;6!CL:0002139;2.20e-19;24!CL:0002144;7.35e-18;3!CL:0002078;6.61e-10;45!CL:0000138;1.27e-09;6!CL:0000115;2.76e-08;36!CL:0000213;1.85e-07;58!CL:0000215;1.85e-07;58!CL:0000153;7.69e-07;9!CL:0000447;7.69e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.17e-33,6;CL:0002138,1.17e-33,6;CL:0005022,1.17e-33,6;CL:0002139,2.27e-19,24;CL:0002144,8.00e-18,3;CL:0000115,3.02e-13,36;CL:0002078,8.78e-11,45;CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0000213,1.46e-08,58;CL:0000215,1.46e-08,58;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | |||
|ontology_enrichment_development_v019=CL:0005022;1.17e-33;6 | |ontology_enrichment_development_v019=CL:0005022;1.17e-33;6 | ||
|ontology_enrichment_disease=DOID:3371!9.79e-09!1;DOID:4549!9.79e-09!1;DOID:5861!9.79e-09!1;DOID:6496!9.79e-09!1;DOID:4960!4.41e-08!1;DOID:0070004!4.41e-08!1 | |ontology_enrichment_disease=DOID:3371!9.79e-09!1;DOID:4549!9.79e-09!1;DOID:5861!9.79e-09!1;DOID:6496!9.79e-09!1;DOID:4960!4.41e-08!1;DOID:0070004!4.41e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;1.88e-50;1!DOID:4549;1.88e-50;1!DOID:5861;1.88e-50;1!DOID:6496;1.88e-50;1!DOID:201;1.27e-09;6!DOID:0060100;1.27e-09;6 | |ontology_enrichment_disease_v019=DOID:3371;1.88e-50;1!DOID:4549;1.88e-50;1!DOID:5861;1.88e-50;1!DOID:6496;1.88e-50;1!DOID:201;1.27e-09;6!DOID:0060100;1.27e-09;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001915!3.78e-22!3;UBERON:0001982!3.78e-22!3;UBERON:0002465!6.71e-18!10;UBERON:0001473!1.14e-14!8;UBERON:0004536!1.14e-14!8;UBERON:0006558!1.14e-14!8;UBERON:0000029!1.52e-08!1;UBERON:0002146!3.10e-08!1;UBERON:0005623!3.10e-08!1;UBERON:0001874!4.72e-08!1;UBERON:0001882!7.16e-08!1;UBERON:0005403!7.16e-08!1;UBERON:0000369!1.47e-07!4;UBERON:0002435!1.47e-07!4;UBERON:0000204!1.47e-07!4;UBERON:0010082!1.47e-07!4 | |ontology_enrichment_uberon=UBERON:0001915!3.78e-22!3;UBERON:0001982!3.78e-22!3;UBERON:0002465!6.71e-18!10;UBERON:0001473!1.14e-14!8;UBERON:0004536!1.14e-14!8;UBERON:0006558!1.14e-14!8;UBERON:0000029!1.52e-08!1;UBERON:0002146!3.10e-08!1;UBERON:0005623!3.10e-08!1;UBERON:0001874!4.72e-08!1;UBERON:0001882!7.16e-08!1;UBERON:0005403!7.16e-08!1;UBERON:0000369!1.47e-07!4;UBERON:0002435!1.47e-07!4;UBERON:0000204!1.47e-07!4;UBERON:0010082!1.47e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.43e-25;8!UBERON:0004536;1.43e-25;8!UBERON:0006558;1.43e-25;8!UBERON:0002465;1.04e-20;10!UBERON:0002418;7.35e-18;3!UBERON:0010523;7.35e-18;3!UBERON:0004755;7.35e-18;3!UBERON:0001915;7.35e-18;3!UBERON:0001982;7.35e-18;3!UBERON:0002405;2.30e-08;27!UBERON:0000055;3.90e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0001473;1.43e-25;8!UBERON:0004536;1.43e-25;8!UBERON:0006558;1.43e-25;8!UBERON:0002465;1.04e-20;10!UBERON:0002418;7.35e-18;3!UBERON:0010523;7.35e-18;3!UBERON:0004755;7.35e-18;3!UBERON:0001915;7.35e-18;3!UBERON:0001982;7.35e-18;3!UBERON:0002405;2.30e-08;27!UBERON:0000055;3.90e-07;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.43e-25,8;UBERON:0004536,1.43e-25,8;UBERON:0006558,1.43e-25,8;UBERON:0002465,1.04e-20,10;UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3;UBERON:0010523,8.00e-18,3;UBERON:0001915,8.00e-18,3;UBERON:0001982,8.00e-18,3;UBERON:0000055,2.01e-07,68 | |||
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|short_description=p31@CD36 | |short_description=p31@CD36 | ||
}} | }} |
Latest revision as of 16:24, 19 September 2015
Short description: | p31@CD36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_CD36_5end |
Coexpression cluster: | C557_Lymphatic_Endothelial_mesothelioma_pleomorphic_Cardiac_lung_aorta |
Association with transcript: | 135bp_to_ENST00000435819, uc003uhc.2_5end |
EntrezGene: | CD36 |
HGNC: | 1663 |
UniProt: | P16671 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.17e-33 | 6 |
endothelial cell of lymphatic vessel | 1.17e-33 | 6 |
vascular lymphangioblast | 1.17e-33 | 6 |
endothelial cell of vascular tree | 2.27e-19 | 24 |
capillary endothelial cell | 8.00e-18 | 3 |
endothelial cell | 3.02e-13 | 36 |
meso-epithelial cell | 8.78e-11 | 45 |
chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
lining cell | 1.46e-08 | 58 |
barrier cell | 1.46e-08 | 58 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.43e-25 | 8 |
lymph vasculature | 1.43e-25 | 8 |
lymphatic part of lymphoid system | 1.43e-25 | 8 |
lymphoid system | 1.04e-20 | 10 |
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
microcirculatory vessel | 8.00e-18 | 3 |
endothelium of capillary | 8.00e-18 | 3 |
capillary | 8.00e-18 | 3 |
vessel | 2.01e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |