FFCP PHASE2:Hg19::chr1:89530952..89530967,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2633 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4182 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4182 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F5H2M9 | ||
|association_with_transcript=0bp_to_ENST00000542693_5end | |association_with_transcript=0bp_to_ENST00000542693_5end | ||
|cluster_id=chr1:89530952..89530967,- | |cluster_id=chr1:89530952..89530967,- | ||
Latest revision as of 16:29, 19 September 2015
| Short description: | p3@GBP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_GBP1_5end |
| Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
| Association with transcript: | 0bp_to_ENST00000542693_5end |
| EntrezGene: | GBP1 |
| HGNC: | 4182 |
| UniProt: | F5H2M9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@GBP1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 4.60e-18 | 42 |
| CD14-positive, CD16-negative classical monocyte | 4.60e-18 | 42 |
| defensive cell | 5.33e-17 | 48 |
| phagocyte | 5.33e-17 | 48 |
| macrophage dendritic cell progenitor | 5.91e-13 | 61 |
| monopoietic cell | 6.11e-13 | 59 |
| monocyte | 6.11e-13 | 59 |
| monoblast | 6.11e-13 | 59 |
| promonocyte | 6.11e-13 | 59 |
| myeloid leukocyte | 2.69e-12 | 72 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system | 2.78e-14 | 167 |
| mesoderm | 3.50e-12 | 315 |
| mesoderm-derived structure | 3.50e-12 | 315 |
| presumptive mesoderm | 3.50e-12 | 315 |
| hematopoietic system | 6.36e-11 | 98 |
| blood island | 6.36e-11 | 98 |
| hemolymphoid system | 7.02e-11 | 108 |
| immune system | 6.62e-10 | 93 |
| bone marrow | 2.53e-09 | 76 |
| skeletal element | 2.55e-09 | 90 |
Showing 1 to 10 of 14 entries
