FFCP PHASE2:Hg19::chr8:9911779..9911871,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4482 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7377 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7377 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9UJ68 | ||
|association_with_transcript=0bp_to_NM_001135670,NM_012331,uc003wsx.2,uc011kwx.1_5end | |association_with_transcript=0bp_to_NM_001135670,NM_012331,uc003wsx.2,uc011kwx.1_5end | ||
|cluster_id=chr8:9911779..9911871,+ | |cluster_id=chr8:9911779..9911871,+ | ||
Latest revision as of 16:38, 19 September 2015
| Short description: | p1@MSRA |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_MSRA_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_NM_001135670, NM_012331, uc003wsx.2, uc011kwx.1_5end |
| EntrezGene: | MSRA |
| HGNC: | 7377 |
| UniProt: | Q9UJ68 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@MSRA |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukocyte | 1.13e-30 | 72 |
| granulocyte monocyte progenitor cell | 1.77e-28 | 67 |
| macrophage dendritic cell progenitor | 8.70e-25 | 61 |
| myeloid lineage restricted progenitor cell | 3.20e-24 | 66 |
| monopoietic cell | 1.06e-23 | 59 |
| monocyte | 1.06e-23 | 59 |
| monoblast | 1.06e-23 | 59 |
| promonocyte | 1.06e-23 | 59 |
| defensive cell | 9.01e-23 | 48 |
| phagocyte | 9.01e-23 | 48 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| lateral plate mesoderm | 1.83e-30 | 203 |
| bone marrow | 6.16e-25 | 76 |
| bone element | 7.27e-24 | 82 |
| immune system | 4.28e-22 | 93 |
| hemolymphoid system | 4.07e-21 | 108 |
| skeletal element | 1.05e-20 | 90 |
| hematopoietic system | 1.25e-20 | 98 |
| blood island | 1.25e-20 | 98 |
| skeletal system | 5.23e-19 | 100 |
| mesoderm | 7.30e-18 | 315 |
Showing 1 to 10 of 29 entries
