FFCP PHASE1:Hg19::chr6:108145828..108145839,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256380 | |EntrezGene=256380 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21397 | |HGNC=21397 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N228 | |UniProt=Q8N228 | ||
|association_with_transcript=-307bp_to_ENST00000369022,NM_198081,uc003prz.3,uc010kdf.2,uc011eam.1_5end | |association_with_transcript=-307bp_to_ENST00000369022,NM_198081,uc003prz.3,uc010kdf.2,uc011eam.1_5end | ||
|cluster_id=chr6:108145828..108145839,- | |||
|coexpression_cluster_id=C22 | |coexpression_cluster_id=C22 | ||
|description=CAGE_peak_7_at_SCML4_5end | |description=CAGE_peak_7_at_SCML4_5end | ||
|id=chr6:108145828..108145839,- | |id=chr6:108145828..108145839,- | ||
|ontology_enrichment_celltype=CL:0000623;2.66e-31;3!CL:0000624;1.13e-26;6!CL:0000791;1.28e-26;18!CL:0000789;1.28e-26;18!CL:0002419;1.28e-26;18!CL:0000084;5.36e-19;25!CL:0000542;2.17e-16;53!CL:0000895;4.67e-11;1!CL:0000625;6.11e-09;11 | |ontology_enrichment_celltype=CL:0000624!6.56e-17!6;CL:0000791!1.09e-16!18;CL:0000789!1.09e-16!18;CL:0002420!1.09e-16!18;CL:0002419!1.09e-16!18;CL:0000790!1.09e-16!18;CL:0000838!4.91e-14!52;CL:0000542!1.05e-13!53;CL:0000051!1.05e-13!53;CL:0000623!2.04e-13!3;CL:0000825!2.04e-13!3;CL:0000084!1.58e-11!25;CL:0000827!1.58e-11!25;CL:0002087!1.51e-10!119;CL:0000738!3.22e-08!140;CL:0002031!6.91e-08!124 | ||
| | |ontology_enrichment_celltype_v019=CL:0000623;2.66e-31;3!CL:0000624;1.13e-26;6!CL:0000791;1.28e-26;18!CL:0000789;1.28e-26;18!CL:0002419;1.28e-26;18!CL:0000084;5.36e-19;25!CL:0000542;2.17e-16;53!CL:0000895;4.67e-11;1!CL:0000625;6.11e-09;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.40e-31,3;CL:0000825,2.40e-31,3;CL:0000624,1.09e-26,6;CL:0000791,1.26e-26,18;CL:0000789,1.26e-26,18;CL:0002420,1.26e-26,18;CL:0002419,1.26e-26,18;CL:0000790,1.26e-26,18;CL:0000838,6.59e-26,52;CL:0000542,2.19e-25,53;CL:0000051,2.19e-25,53;CL:0000084,5.29e-19,25;CL:0000827,5.29e-19,25;CL:0002087,1.07e-14,115;CL:0000738,4.13e-12,136;CL:0002031,5.81e-12,120;CL:0000810,4.01e-11,1;CL:0000895,4.01e-11,1;CL:0002436,4.01e-11,1;CL:0002427,4.01e-11,1;CL:0002428,4.01e-11,1;CL:0002429,4.01e-11,1;CL:0002433,4.01e-11,1;CL:0002431,4.01e-11,1;CL:0002432,4.01e-11,1;CL:0000037,2.13e-09,168;CL:0000625,6.11e-09,11;CL:0000988,8.26e-09,177;CL:0002032,2.05e-08,161;CL:0000837,2.05e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.28e-26;18!CL:0000051;2.17e-16;53!CL:0002427;4.67e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@SCML4 | |short_description=p7@SCML4 | ||
}} | }} |
Latest revision as of 16:56, 19 September 2015
Short description: | p7@SCML4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SCML4_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -307bp_to_ENST00000369022, NM_198081, uc003prz.3, uc010kdf.2, uc011eam.1_5end |
EntrezGene: | SCML4 |
HGNC: | 21397 |
UniProt: | Q8N228 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data