FFCP PHASE1:Hg19::chr17:34900837..34900860,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:34900837..34900860,+
|short_description=p3@GGNBP2
|description=CAGE_peak_3_at_GGNBP2_5end
|association_with_transcript=21bp_to_ENST00000486208_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79893 | |EntrezGene=79893 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19357 | |HGNC=19357 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000486208_5end | |||
|cluster_id=chr17:34900837..34900860,+ | |||
|description=CAGE_peak_3_at_GGNBP2_5end | |||
|id=chr17:34900837..34900860,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.81e-13!140;CL:0000988!7.53e-12!182;CL:0000037!9.92e-12!172;CL:0000566!9.92e-12!172;CL:0002031!2.84e-10!124;CL:0002032!3.90e-10!165;CL:0000837!3.90e-10!165;CL:0000766!1.67e-08!76;CL:0002087!3.02e-08!119;CL:0000557!8.59e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000081;5.00e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.00e-18,136;CL:0000988,4.69e-16,177;CL:0000037,2.13e-15,168;CL:0002031,1.06e-13,120;CL:0002032,1.34e-13,161;CL:0000837,1.34e-13,161;CL:0000766,7.85e-13,72;CL:0002087,2.81e-11,115;CL:0000557,2.02e-10,67;CL:0000763,1.15e-09,108;CL:0000049,1.15e-09,108;CL:0000839,5.91e-09,66;CL:0002009,1.07e-07,61;CL:0000081,1.68e-07,11;CL:0002393,6.27e-07,9;CL:0002397,6.27e-07,9;CL:0002194,9.15e-07,59;CL:0000576,9.15e-07,59;CL:0000040,9.15e-07,59;CL:0000559,9.15e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.05e-10!112;UBERON:0002390!1.69e-09!102;UBERON:0003061!1.69e-09!102;UBERON:0007023!8.12e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.48e-07;15!UBERON:0000179;1.48e-07;15!UBERON:0000463;1.48e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.64e-14,108;UBERON:0002390,3.77e-13,98;UBERON:0003061,3.77e-13,98;UBERON:0002405,3.50e-09,93;UBERON:0002371,6.72e-09,76;UBERON:0001474,1.22e-07,82;UBERON:0000178,2.49e-07,15;UBERON:0000179,2.49e-07,15;UBERON:0000463,2.49e-07,15 | |||
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| ||
|short_description=p3@GGNBP2 | |||
}} | }} |
Latest revision as of 17:06, 19 September 2015
Short description: | p3@GGNBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GGNBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000486208_5end |
EntrezGene: | GGNBP2 |
HGNC: | 19357 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.00e-18 | 136 |
hematopoietic cell | 4.69e-16 | 177 |
hematopoietic stem cell | 2.13e-15 | 168 |
hematopoietic lineage restricted progenitor cell | 1.06e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.34e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.34e-13 | 161 |
myeloid leukocyte | 7.85e-13 | 72 |
nongranular leukocyte | 2.81e-11 | 115 |
granulocyte monocyte progenitor cell | 2.02e-10 | 67 |
myeloid cell | 1.15e-09 | 108 |
common myeloid progenitor | 1.15e-09 | 108 |
myeloid lineage restricted progenitor cell | 5.91e-09 | 66 |
macrophage dendritic cell progenitor | 1.07e-07 | 61 |
blood cell | 1.68e-07 | 11 |
intermediate monocyte | 6.27e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.27e-07 | 9 |
monopoietic cell | 9.15e-07 | 59 |
monocyte | 9.15e-07 | 59 |
monoblast | 9.15e-07 | 59 |
promonocyte | 9.15e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.64e-14 | 108 |
hematopoietic system | 3.77e-13 | 98 |
blood island | 3.77e-13 | 98 |
immune system | 3.50e-09 | 93 |
bone marrow | 6.72e-09 | 76 |
bone element | 1.22e-07 | 82 |
blood | 2.49e-07 | 15 |
haemolymphatic fluid | 2.49e-07 | 15 |
organism substance | 2.49e-07 | 15 |