FFCP PHASE1:Hg19::chr10:88281494..88281570,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23063 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23293 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z5K2 | |||
|association_with_transcript=0bp_to_ENST00000298767,NM_015045,uc001kdn.2,uc001kdo.2,uc009xsw.2,uc010qmi.1,uc010qmj.1_5end | |||
|cluster_id=chr10:88281494..88281570,- | |||
|coexpression_cluster_id=C3053 | |||
|description=CAGE_peak_1_at_WAPAL_5end | |||
|id=chr10:88281494..88281570,- | |||
|ontology_enrichment_celltype=CL:0000037!1.28e-36!172;CL:0000566!1.28e-36!172;CL:0000738!1.82e-36!140;CL:0002032!2.24e-34!165;CL:0000837!2.24e-34!165;CL:0000988!8.25e-31!182;CL:0002031!1.39e-30!124;CL:0002087!6.07e-28!119;CL:0000766!3.62e-27!76;CL:0000763!6.44e-27!112;CL:0000049!6.44e-27!112;CL:0000557!1.16e-24!71;CL:0000839!7.58e-24!70;CL:0002009!7.44e-22!65;CL:0002194!7.40e-21!63;CL:0000576!7.40e-21!63;CL:0000040!7.40e-21!63;CL:0000559!7.40e-21!63;CL:0000860!2.20e-18!45;CL:0002057!1.91e-17!42;CL:0000542!2.76e-07!53;CL:0000051!2.76e-07!53;CL:0000838!3.33e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-17;33!CL:0002057;1.16e-17;33!CL:0000473;1.72e-14;39!CL:0000234;1.72e-14;39!CL:0000576;1.23e-12;48!CL:0000766;1.09e-10;69!CL:0002087;6.39e-09;104!CL:0000738;8.44e-08;136!CL:0000763;9.71e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.13e-35,168;CL:0000738,1.40e-35,136;CL:0002032,1.89e-33,161;CL:0000837,1.89e-33,161;CL:0000988,1.10e-30,177;CL:0002031,9.70e-30,120;CL:0002087,4.11e-27,115;CL:0000766,1.73e-26,72;CL:0000763,4.21e-26,108;CL:0000049,4.21e-26,108;CL:0000557,5.49e-24,67;CL:0000839,3.62e-23,66;CL:0002009,3.48e-21,61;CL:0002194,3.46e-20,59;CL:0000576,3.46e-20,59;CL:0000040,3.46e-20,59;CL:0000559,3.46e-20,59;CL:0000860,1.91e-17,42;CL:0002057,1.91e-17,42;CL:0000473,3.07e-17,48;CL:0000234,3.07e-17,48;CL:0000542,2.76e-07,53;CL:0000051,2.76e-07,53;CL:0000838,3.33e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;2.83e-13;42!CL:0000049;2.83e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.28e-23!102;UBERON:0003061!6.28e-23!102;UBERON:0002371!3.55e-19!80;UBERON:0002193!8.65e-19!112;UBERON:0001474!4.90e-18!86;UBERON:0004765!8.95e-15!101;UBERON:0001434!8.95e-15!101;UBERON:0002405!1.64e-14!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.89e-22,98;UBERON:0003061,3.89e-22,98;UBERON:0002371,1.99e-18,76;UBERON:0002193,5.26e-18,108;UBERON:0001474,2.81e-17,82;UBERON:0002405,1.19e-15,93;UBERON:0004765,8.01e-14,90;UBERON:0001434,5.73e-13,100 | |||
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| |||
|short_description=p1@WAPAL | |||
}} |
Latest revision as of 17:29, 19 September 2015
Short description: | p1@WAPAL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WAPAL_5end |
Coexpression cluster: | C3053_Eosinophils_Neutrophils_CD14_granulocyte_immature_CD8_Basophils |
Association with transcript: | 0bp_to_ENST00000298767, NM_015045, uc001kdn.2, uc001kdo.2, uc009xsw.2, uc010qmi.1, uc010qmj.1_5end |
EntrezGene: | WAPAL |
HGNC: | 23293 |
UniProt: | Q7Z5K2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.13e-35 | 168 |
leukocyte | 1.40e-35 | 136 |
hematopoietic oligopotent progenitor cell | 1.89e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.89e-33 | 161 |
hematopoietic cell | 1.10e-30 | 177 |
hematopoietic lineage restricted progenitor cell | 9.70e-30 | 120 |
nongranular leukocyte | 4.11e-27 | 115 |
myeloid leukocyte | 1.73e-26 | 72 |
myeloid cell | 4.21e-26 | 108 |
common myeloid progenitor | 4.21e-26 | 108 |
granulocyte monocyte progenitor cell | 5.49e-24 | 67 |
myeloid lineage restricted progenitor cell | 3.62e-23 | 66 |
macrophage dendritic cell progenitor | 3.48e-21 | 61 |
monopoietic cell | 3.46e-20 | 59 |
monocyte | 3.46e-20 | 59 |
monoblast | 3.46e-20 | 59 |
promonocyte | 3.46e-20 | 59 |
classical monocyte | 1.91e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.91e-17 | 42 |
defensive cell | 3.07e-17 | 48 |
phagocyte | 3.07e-17 | 48 |
lymphocyte | 2.76e-07 | 53 |
common lymphoid progenitor | 2.76e-07 | 53 |
lymphoid lineage restricted progenitor cell | 3.33e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.89e-22 | 98 |
blood island | 3.89e-22 | 98 |
bone marrow | 1.99e-18 | 76 |
hemolymphoid system | 5.26e-18 | 108 |
bone element | 2.81e-17 | 82 |
immune system | 1.19e-15 | 93 |
skeletal element | 8.01e-14 | 90 |
skeletal system | 5.73e-13 | 100 |