FFCP PHASE1:Hg19::chr10:88428320..88428321,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11155 | |EntrezGene=11155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15710 | |HGNC=15710 | ||
|TSSclassifier=strong | |||
|UniProt=O75112 | |UniProt=O75112 | ||
|association_with_transcript=0bp_to_NM_001080116,uc001kdr.2_5end | |association_with_transcript=0bp_to_NM_001080116,uc001kdr.2_5end | ||
|cluster_id=chr10:88428320..88428321,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_6_at_LDB3_5end | |description=CAGE_peak_6_at_LDB3_5end | ||
|id=chr10:88428320..88428321,+ | |id=chr10:88428320..88428321,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.66e-11;1!UBERON:0004140;4.36e-11;1!UBERON:0004874;5.05e-11;1!UBERON:0010226;5.84e-11;1!UBERON:0000358;1.10e-10;1!UBERON:0005062;2.85e-10;4!UBERON:0007284;2.85e-10;4!UBERON:0006603;2.71e-09;65!UBERON:0003104;2.38e-07;31 | |||
|ontology_enrichment_disease=DOID:114!2.70e-12!2;DOID:178!6.80e-07!1;DOID:326!6.80e-07!1;DOID:3978!6.80e-07!1;DOID:3394!6.80e-07!1;DOID:5844!6.80e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:114;2.05e-20;2!DOID:178;5.84e-11;1!DOID:326;5.84e-11;1!DOID:3978;5.84e-11;1!DOID:3394;5.84e-11;1!DOID:5844;5.84e-11;1!DOID:1287;1.10e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.05e-20,2;DOID:178,6.14e-11,1;DOID:326,6.14e-11,1;DOID:3978,6.14e-11,1;DOID:3394,6.14e-11,1;DOID:5844,6.14e-11,1;DOID:1287,1.10e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-19!115;UBERON:0007100!5.28e-12!27;UBERON:0001630!5.51e-12!2;UBERON:0005090!5.51e-12!2;UBERON:0000341!8.06e-12!2;UBERON:0003103!1.07e-10!69;UBERON:0001042!1.12e-08!10;UBERON:0009145!1.12e-08!10;UBERON:0008814!1.12e-08!15;UBERON:0004151!1.60e-08!3;UBERON:0001723!1.99e-08!3;UBERON:0001033!1.99e-08!3;UBERON:0010056!1.99e-08!3;UBERON:0003978!3.55e-08!3;UBERON:0009751!3.55e-08!3;UBERON:0000946!3.55e-08!3;UBERON:0002523!3.55e-08!3;UBERON:0005983!3.55e-08!3;UBERON:0002165!3.55e-08!3;UBERON:0002062!3.55e-08!3;UBERON:0007280!3.55e-08!3;UBERON:0006562!6.78e-08!11;UBERON:0002079!4.09e-07!1;UBERON:0000989!6.08e-07!1;UBERON:0008811!6.08e-07!1;UBERON:0006258!6.08e-07!1;UBERON:0005876!6.08e-07!1;UBERON:0004874!6.08e-07!1;UBERON:0002084!6.43e-07!1;UBERON:0002082!6.43e-07!1;UBERON:0004706!6.43e-07!1;UBERON:0005418!7.60e-07!1;UBERON:0001389!7.60e-07!1;UBERON:0000026!7.60e-07!1;UBERON:0008784!7.60e-07!1;UBERON:0006058!7.60e-07!1;UBERON:0003663!7.60e-07!1;UBERON:0001383!7.60e-07!1;UBERON:0004256!7.60e-07!1;UBERON:0002529!7.60e-07!1;UBERON:0004708!7.60e-07!1;UBERON:0002101!7.60e-07!1;UBERON:0004709!7.60e-07!1;UBERON:0003661!7.60e-07!1;UBERON:0002471!7.60e-07!1;UBERON:0004357!7.60e-07!1;UBERON:0009872!7.60e-07!1;UBERON:0004347!7.60e-07!1;UBERON:0005420!7.60e-07!1;UBERON:0005732!7.60e-07!1;UBERON:0006057!7.60e-07!1;UBERON:0000978!7.60e-07!1;UBERON:0002103!7.60e-07!1;UBERON:0001665!7.60e-07!1;UBERON:0003823!7.60e-07!1;UBERON:0000154!7.60e-07!1;UBERON:0005733!7.60e-07!1;UBERON:0005730!7.60e-07!1;UBERON:0002135!8.03e-07!1;UBERON:0002426!8.49e-07!1;UBERON:0003831!8.49e-07!1;UBERON:0003898!8.49e-07!1;UBERON:0004830!8.49e-07!1;UBERON:0001774!8.49e-07!1;UBERON:0003830!8.49e-07!1;UBERON:0005175!8.49e-07!1;UBERON:0003897!8.49e-07!1;UBERON:0001103!8.49e-07!1;UBERON:0010084!8.49e-07!1 | |ontology_enrichment_uberon=UBERON:0007023!1.85e-19!115;UBERON:0007100!5.28e-12!27;UBERON:0001630!5.51e-12!2;UBERON:0005090!5.51e-12!2;UBERON:0000341!8.06e-12!2;UBERON:0003103!1.07e-10!69;UBERON:0001042!1.12e-08!10;UBERON:0009145!1.12e-08!10;UBERON:0008814!1.12e-08!15;UBERON:0004151!1.60e-08!3;UBERON:0001723!1.99e-08!3;UBERON:0001033!1.99e-08!3;UBERON:0010056!1.99e-08!3;UBERON:0003978!3.55e-08!3;UBERON:0009751!3.55e-08!3;UBERON:0000946!3.55e-08!3;UBERON:0002523!3.55e-08!3;UBERON:0005983!3.55e-08!3;UBERON:0002165!3.55e-08!3;UBERON:0002062!3.55e-08!3;UBERON:0007280!3.55e-08!3;UBERON:0006562!6.78e-08!11;UBERON:0002079!4.09e-07!1;UBERON:0000989!6.08e-07!1;UBERON:0008811!6.08e-07!1;UBERON:0006258!6.08e-07!1;UBERON:0005876!6.08e-07!1;UBERON:0004874!6.08e-07!1;UBERON:0002084!6.43e-07!1;UBERON:0002082!6.43e-07!1;UBERON:0004706!6.43e-07!1;UBERON:0005418!7.60e-07!1;UBERON:0001389!7.60e-07!1;UBERON:0000026!7.60e-07!1;UBERON:0008784!7.60e-07!1;UBERON:0006058!7.60e-07!1;UBERON:0003663!7.60e-07!1;UBERON:0001383!7.60e-07!1;UBERON:0004256!7.60e-07!1;UBERON:0002529!7.60e-07!1;UBERON:0004708!7.60e-07!1;UBERON:0002101!7.60e-07!1;UBERON:0004709!7.60e-07!1;UBERON:0003661!7.60e-07!1;UBERON:0002471!7.60e-07!1;UBERON:0004357!7.60e-07!1;UBERON:0009872!7.60e-07!1;UBERON:0004347!7.60e-07!1;UBERON:0005420!7.60e-07!1;UBERON:0005732!7.60e-07!1;UBERON:0006057!7.60e-07!1;UBERON:0000978!7.60e-07!1;UBERON:0002103!7.60e-07!1;UBERON:0001665!7.60e-07!1;UBERON:0003823!7.60e-07!1;UBERON:0000154!7.60e-07!1;UBERON:0005733!7.60e-07!1;UBERON:0005730!7.60e-07!1;UBERON:0002135!8.03e-07!1;UBERON:0002426!8.49e-07!1;UBERON:0003831!8.49e-07!1;UBERON:0003898!8.49e-07!1;UBERON:0004830!8.49e-07!1;UBERON:0001774!8.49e-07!1;UBERON:0003830!8.49e-07!1;UBERON:0005175!8.49e-07!1;UBERON:0003897!8.49e-07!1;UBERON:0001103!8.49e-07!1;UBERON:0010084!8.49e-07!1 | ||
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|short_description=p6@LDB3 | |short_description=p6@LDB3 | ||
}} | }} |
Latest revision as of 17:34, 19 September 2015
Short description: | p6@LDB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LDB3_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_NM_001080116, uc001kdr.2_5end |
EntrezGene: | LDB3 |
HGNC: | 15710 |
UniProt: | O75112 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.05e-20 | 2 |
vascular disease | 6.14e-11 | 1 |
ischemia | 6.14e-11 | 1 |
extrinsic cardiomyopathy | 6.14e-11 | 1 |
myocardial ischemia | 6.14e-11 | 1 |
myocardial infarction | 6.14e-11 | 1 |
cardiovascular system disease | 1.10e-10 | 4 |