FFCP PHASE1:Hg19::chr3:9439375..9439395,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55209 | |EntrezGene=55209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25566 | |HGNC=25566 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0A6,C9JLA7 | |UniProt=Q9C0A6,C9JLA7 | ||
|association_with_transcript=-7bp_to_ENST00000402198,ENST00000402466,ENST00000450326,NM_001080517,uc003brs.1,uc003brt.2_5end | |association_with_transcript=-7bp_to_ENST00000402198,ENST00000402466,ENST00000450326,NM_001080517,uc003brs.1,uc003brt.2_5end | ||
|cluster_id=chr3:9439375..9439395,+ | |||
|description=CAGE_peak_5_at_SETD5_5end | |description=CAGE_peak_5_at_SETD5_5end | ||
|id=chr3:9439375..9439395,+ | |id=chr3:9439375..9439395,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.87e-18!140;CL:0002031!7.89e-16!124;CL:0002087!5.63e-15!119;CL:0002032!7.94e-15!165;CL:0000837!7.94e-15!165;CL:0000037!2.07e-14!172;CL:0000566!2.07e-14!172;CL:0002057!1.07e-13!42;CL:0000988!2.09e-13!182;CL:0000860!8.60e-12!45;CL:0000557!9.92e-10!71;CL:0000766!1.15e-09!76;CL:0002009!2.42e-08!65;CL:0000839!2.49e-08!70;CL:0000763!4.54e-08!112;CL:0000049!4.54e-08!112;CL:0002194!5.70e-08!63;CL:0000576!5.70e-08!63;CL:0000040!5.70e-08!63;CL:0000559!5.70e-08!63;CL:0000838!7.52e-08!52;CL:0000542!1.52e-07!53;CL:0000051!1.52e-07!53 | |ontology_enrichment_celltype=CL:0000738!9.87e-18!140;CL:0002031!7.89e-16!124;CL:0002087!5.63e-15!119;CL:0002032!7.94e-15!165;CL:0000837!7.94e-15!165;CL:0000037!2.07e-14!172;CL:0000566!2.07e-14!172;CL:0002057!1.07e-13!42;CL:0000988!2.09e-13!182;CL:0000860!8.60e-12!45;CL:0000557!9.92e-10!71;CL:0000766!1.15e-09!76;CL:0002009!2.42e-08!65;CL:0000839!2.49e-08!70;CL:0000763!4.54e-08!112;CL:0000049!4.54e-08!112;CL:0002194!5.70e-08!63;CL:0000576!5.70e-08!63;CL:0000040!5.70e-08!63;CL:0000559!5.70e-08!63;CL:0000838!7.52e-08!52;CL:0000542!1.52e-07!53;CL:0000051!1.52e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.15e-17;33!CL:0002057;2.15e-17;33!CL:0000473;3.28e-11;39!CL:0000234;3.28e-11;39!CL:0000576;2.06e-09;48!CL:0002087;1.97e-07;104!CL:0000766;2.22e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.31e-20,136;CL:0002031,1.04e-17,120;CL:0002087,1.38e-16,115;CL:0002032,2.60e-16,161;CL:0000837,2.60e-16,161;CL:0000037,1.61e-15,168;CL:0000860,4.81e-15,42;CL:0002057,4.81e-15,42;CL:0000988,1.97e-14,177;CL:0000766,1.69e-12,72;CL:0000473,2.65e-12,48;CL:0000234,2.65e-12,48;CL:0000557,2.77e-12,67;CL:0002009,1.35e-10,61;CL:0000839,2.27e-10,66;CL:0002194,3.67e-10,59;CL:0000576,3.67e-10,59;CL:0000040,3.67e-10,59;CL:0000559,3.67e-10,59;CL:0000763,1.15e-09,108;CL:0000049,1.15e-09,108;CL:0000838,1.52e-07,52;CL:0000542,3.93e-07,53;CL:0000051,3.93e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.99e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.48e-08!102;UBERON:0003061!1.48e-08!102;UBERON:0002405!4.69e-08!115;UBERON:0002193!5.62e-08!112;UBERON:0007023!1.10e-07!115;UBERON:0002371!1.97e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!1.48e-08!102;UBERON:0003061!1.48e-08!102;UBERON:0002405!4.69e-08!115;UBERON:0002193!5.62e-08!112;UBERON:0007023!1.10e-07!115;UBERON:0002371!1.97e-07!80 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.26e-11,98;UBERON:0003061,9.26e-11,98;UBERON:0002193,1.18e-10,108;UBERON:0002405,1.24e-10,93;UBERON:0002371,1.90e-09,76;UBERON:0001474,5.24e-08,82;UBERON:0007023,2.97e-07,114 | |||
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| ||
|short_description=p5@SETD5 | |short_description=p5@SETD5 | ||
}} | }} |
Latest revision as of 20:12, 19 September 2015
Short description: | p5@SETD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SETD5_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000402198, ENST00000402466, ENST00000450326, NM_001080517, uc003brs.1, uc003brt.2_5end |
EntrezGene: | SETD5 |
HGNC: | 25566 |
UniProt: | Q9C0A6C9JLA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.31e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 1.04e-17 | 120 |
nongranular leukocyte | 1.38e-16 | 115 |
hematopoietic oligopotent progenitor cell | 2.60e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.60e-16 | 161 |
hematopoietic stem cell | 1.61e-15 | 168 |
classical monocyte | 4.81e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.81e-15 | 42 |
hematopoietic cell | 1.97e-14 | 177 |
myeloid leukocyte | 1.69e-12 | 72 |
defensive cell | 2.65e-12 | 48 |
phagocyte | 2.65e-12 | 48 |
granulocyte monocyte progenitor cell | 2.77e-12 | 67 |
macrophage dendritic cell progenitor | 1.35e-10 | 61 |
myeloid lineage restricted progenitor cell | 2.27e-10 | 66 |
monopoietic cell | 3.67e-10 | 59 |
monocyte | 3.67e-10 | 59 |
monoblast | 3.67e-10 | 59 |
promonocyte | 3.67e-10 | 59 |
myeloid cell | 1.15e-09 | 108 |
common myeloid progenitor | 1.15e-09 | 108 |
lymphoid lineage restricted progenitor cell | 1.52e-07 | 52 |
lymphocyte | 3.93e-07 | 53 |
common lymphoid progenitor | 3.93e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.26e-11 | 98 |
blood island | 9.26e-11 | 98 |
hemolymphoid system | 1.18e-10 | 108 |
immune system | 1.24e-10 | 93 |
bone marrow | 1.90e-09 | 76 |
bone element | 5.24e-08 | 82 |
adult organism | 2.97e-07 | 114 |