FFCP PHASE1:Hg19::chr3:9439400..9439414,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:9439400..9439414,+ to FFCP PHASE1:Hg19::chr3:9439400..9439414,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55209 | |EntrezGene=55209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25566 | |HGNC=25566 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0A6,C9JLA7 | |UniProt=Q9C0A6,C9JLA7 | ||
|association_with_transcript=0bp_to_ENST00000402198,ENST00000402466,ENST00000450326,NM_001080517,uc003brs.1,uc003brt.2_5end | |||
|cluster_id=chr3:9439400..9439414,+ | |||
|description=CAGE_peak_4_at_SETD5_5end | |||
|id=chr3:9439400..9439414,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.64e-26!140;CL:0000037!1.21e-22!172;CL:0000566!1.21e-22!172;CL:0000988!1.30e-22!182;CL:0002057!3.78e-20!42;CL:0002032!4.85e-20!165;CL:0000837!4.85e-20!165;CL:0000766!1.38e-19!76;CL:0000860!2.00e-18!45;CL:0002031!1.00e-17!124;CL:0000557!6.89e-17!71;CL:0002087!1.24e-16!119;CL:0000763!1.42e-16!112;CL:0000049!1.42e-16!112;CL:0000839!2.49e-14!70;CL:0002009!2.74e-14!65;CL:0002194!2.47e-13!63;CL:0000576!2.47e-13!63;CL:0000040!2.47e-13!63;CL:0000559!2.47e-13!63;CL:0000219!9.43e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-20;33!CL:0002057;1.14e-20;33!CL:0000473;1.26e-14;39!CL:0000234;1.26e-14;39!CL:0000576;5.83e-13;48!CL:0000766;4.64e-11;69!CL:0002087;7.74e-08;104!CL:0000738;9.71e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.01e-28,136;CL:0000037,3.02e-24,168;CL:0000988,6.14e-24,177;CL:0000860,4.87e-22,42;CL:0002057,4.87e-22,42;CL:0000766,6.72e-22,72;CL:0002032,2.07e-21,161;CL:0000837,2.07e-21,161;CL:0000557,6.87e-19,67;CL:0002031,8.27e-19,120;CL:0000473,1.41e-18,48;CL:0000234,1.41e-18,48;CL:0000763,2.64e-18,108;CL:0000049,2.64e-18,108;CL:0002087,1.10e-17,115;CL:0002009,5.41e-16,61;CL:0000839,6.56e-16,66;CL:0002194,6.36e-15,59;CL:0000576,6.36e-15,59;CL:0000040,6.36e-15,59;CL:0000559,6.36e-15,59;CL:0000219,8.81e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.17e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.18e-14!102;UBERON:0003061!4.18e-14!102;UBERON:0002371!4.55e-14!80;UBERON:0002193!6.91e-14!112;UBERON:0001474!4.69e-13!86;UBERON:0002405!1.02e-11!115;UBERON:0004765!2.97e-10!101;UBERON:0001434!2.97e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.29e-15,98;UBERON:0003061,1.29e-15,98;UBERON:0002371,1.81e-15,76;UBERON:0002405,2.27e-15,93;UBERON:0002193,2.97e-15,108;UBERON:0001474,4.57e-14,82;UBERON:0004765,5.65e-11,90;UBERON:0001434,6.90e-10,100 | |||
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| ||
|short_description=p4@SETD5 | |||
}} | }} |
Latest revision as of 20:13, 19 September 2015
Short description: | p4@SETD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SETD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000402198, ENST00000402466, ENST00000450326, NM_001080517, uc003brs.1, uc003brt.2_5end |
EntrezGene: | SETD5 |
HGNC: | 25566 |
UniProt: | Q9C0A6C9JLA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.01e-28 | 136 |
hematopoietic stem cell | 3.02e-24 | 168 |
hematopoietic cell | 6.14e-24 | 177 |
classical monocyte | 4.87e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.87e-22 | 42 |
myeloid leukocyte | 6.72e-22 | 72 |
hematopoietic oligopotent progenitor cell | 2.07e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-21 | 161 |
granulocyte monocyte progenitor cell | 6.87e-19 | 67 |
hematopoietic lineage restricted progenitor cell | 8.27e-19 | 120 |
defensive cell | 1.41e-18 | 48 |
phagocyte | 1.41e-18 | 48 |
myeloid cell | 2.64e-18 | 108 |
common myeloid progenitor | 2.64e-18 | 108 |
nongranular leukocyte | 1.10e-17 | 115 |
macrophage dendritic cell progenitor | 5.41e-16 | 61 |
myeloid lineage restricted progenitor cell | 6.56e-16 | 66 |
monopoietic cell | 6.36e-15 | 59 |
monocyte | 6.36e-15 | 59 |
monoblast | 6.36e-15 | 59 |
promonocyte | 6.36e-15 | 59 |
motile cell | 8.81e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.29e-15 | 98 |
blood island | 1.29e-15 | 98 |
bone marrow | 1.81e-15 | 76 |
immune system | 2.27e-15 | 93 |
hemolymphoid system | 2.97e-15 | 108 |
bone element | 4.57e-14 | 82 |
skeletal element | 5.65e-11 | 90 |
skeletal system | 6.90e-10 | 100 |