FFCP PHASE1:Hg19::chr3:97483675..97483686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84100 | |EntrezGene=84100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13210 | |HGNC=13210 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=64bp_to_ENST00000496713_5end | |association_with_transcript=64bp_to_ENST00000496713_5end | ||
|cluster_id=chr3:97483675..97483686,+ | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_5_at_ARL6_5end | |description=CAGE_peak_5_at_ARL6_5end | ||
|id=chr3:97483675..97483686,+ | |id=chr3:97483675..97483686,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;3.41e-09;6!CL:0000404;3.41e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.03e-09,6;CL:0000031,4.03e-09,6;CL:0000404,4.03e-09,6;CL:0000047,4.69e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;3.41e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.18e-18!94;UBERON:0001016!1.18e-18!94;UBERON:0001017!9.20e-18!82;UBERON:0005743!2.12e-17!86;UBERON:0001049!3.82e-17!57;UBERON:0005068!3.82e-17!57;UBERON:0006241!3.82e-17!57;UBERON:0007135!3.82e-17!57;UBERON:0000955!1.16e-16!69;UBERON:0006238!1.16e-16!69;UBERON:0002616!2.24e-16!59;UBERON:0001869!2.41e-14!32;UBERON:0002020!2.66e-14!34;UBERON:0003528!2.66e-14!34;UBERON:0002780!1.50e-13!41;UBERON:0001890!1.50e-13!41;UBERON:0006240!1.50e-13!41;UBERON:0001893!4.00e-13!34;UBERON:0003080!4.73e-13!42;UBERON:0003075!7.84e-13!86;UBERON:0007284!7.84e-13!86;UBERON:0002346!1.46e-12!90;UBERON:0002791!3.41e-12!33;UBERON:0002619!3.01e-11!22;UBERON:0003056!6.72e-11!61;UBERON:0004121!8.32e-11!169;UBERON:0000924!9.19e-11!173;UBERON:0006601!9.19e-11!173;UBERON:0000033!8.45e-10!123;UBERON:0001950!1.97e-09!20;UBERON:0000956!2.08e-09!25;UBERON:0000203!2.08e-09!25;UBERON:0000153!8.71e-09!129;UBERON:0007811!8.71e-09!129;UBERON:0007023!1.63e-08!115;UBERON:0000475!2.92e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;7.50e-11;5!UBERON:0002619;7.35e-09;22!UBERON:0000956;7.34e-08;25!UBERON:0000203;7.34e-08;25!UBERON:0001905;1.70e-07;2!UBERON:0002360;1.70e-07;2!UBERON:0001954;1.70e-07;2!UBERON:0002757;1.70e-07;2!UBERON:0010134;1.70e-07;2!UBERON:0000094;1.70e-07;2!UBERON:0003022;1.70e-07;2!UBERON:0005408;1.70e-07;2!UBERON:0002421;1.70e-07;2!UBERON:0001899;1.70e-07;2!UBERON:0002600;1.70e-07;2!UBERON:0010743;1.70e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.66e-12,89;UBERON:0001017,4.60e-11,81;UBERON:0002021,5.57e-11,5;UBERON:0002619,6.63e-09,22;UBERON:0000956,6.70e-08,25;UBERON:0000203,6.70e-08,25;UBERON:0011216,1.25e-07,223;UBERON:0001954,1.36e-07,2;UBERON:0003022,1.36e-07,2;UBERON:0002421,1.36e-07,2;UBERON:0002600,1.36e-07,2;UBERON:0001905,1.64e-07,2;UBERON:0002757,1.64e-07,2;UBERON:0010134,1.64e-07,2;UBERON:0005408,1.64e-07,2;UBERON:0001899,1.64e-07,2;UBERON:0002360,2.12e-07,2;UBERON:0000094,2.12e-07,2;UBERON:0010743,2.12e-07,2;UBERON:0002780,2.45e-07,41;UBERON:0001890,2.45e-07,41;UBERON:0003080,2.45e-07,41;UBERON:0006240,2.45e-07,41;UBERON:0003056,6.63e-07,61 | |||
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| ||
|short_description=p5@ARL6 | |short_description=p5@ARL6 | ||
}} | }} |
Latest revision as of 21:02, 19 September 2015
Short description: | p5@ARL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARL6_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 64bp_to_ENST00000496713_5end |
EntrezGene: | ARL6 |
HGNC: | 13210 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.03e-09 | 6 |
neuroblast | 4.03e-09 | 6 |
electrically signaling cell | 4.03e-09 | 6 |
neuronal stem cell | 4.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.66e-12 | 89 |
central nervous system | 4.60e-11 | 81 |
occipital lobe | 5.57e-11 | 5 |
regional part of cerebral cortex | 6.63e-09 | 22 |
cerebral cortex | 6.70e-08 | 25 |
pallium | 6.70e-08 | 25 |
organ system subdivision | 1.25e-07 | 223 |
Ammon's horn | 1.36e-07 | 2 |
lobe parts of cerebral cortex | 1.36e-07 | 2 |
hippocampal formation | 1.36e-07 | 2 |
limbic lobe | 1.36e-07 | 2 |
pineal body | 1.64e-07 | 2 |
regional part of epithalamus | 1.64e-07 | 2 |
secretory circumventricular organ | 1.64e-07 | 2 |
circumventricular organ | 1.64e-07 | 2 |
epithalamus | 1.64e-07 | 2 |
meninx | 2.12e-07 | 2 |
membrane organ | 2.12e-07 | 2 |
meningeal cluster | 2.12e-07 | 2 |
regional part of forebrain | 2.45e-07 | 41 |
forebrain | 2.45e-07 | 41 |
anterior neural tube | 2.45e-07 | 41 |
future forebrain | 2.45e-07 | 41 |
pre-chordal neural plate | 6.63e-07 | 61 |